data_5TOE # _model_server_result.job_id oDHOl0a7tbQlo46zWqm_bA _model_server_result.datetime_utc '2024-12-26 23:24:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5toe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5TOE # _exptl.entry_id 5TOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 303.361 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[4-(piperazin-1-yl)phenyl]-1H-pyrrolo[2,3-b]pyridine-4-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TOE _cell.length_a 97.246 _cell.length_b 97.246 _cell.length_c 81.081 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H17 N5' _chem_comp.formula_weight 303.361 _chem_comp.id 7GK _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-(piperazin-1-yl)phenyl]-1H-pyrrolo[2,3-b]pyridine-4-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAT CAS 7GK sing 1 n n NAT CAU 7GK sing 2 n n CAS CAR 7GK sing 3 n n CAU CAV 7GK sing 4 n n CAR NAQ 7GK sing 5 n n CAV NAQ 7GK sing 6 n n NAQ CAN 7GK sing 7 n n CAN CAO 7GK doub 8 n y CAN CAM 7GK sing 9 n y CAO CAP 7GK sing 10 n y CAM CAL 7GK doub 11 n y CAP CAJ 7GK doub 12 n y CAL CAJ 7GK sing 13 n y CAJ CAH 7GK sing 14 n n CAH CAI 7GK doub 15 n y CAH NAG 7GK sing 16 n y CAI CAE 7GK sing 17 n y NAG CAF 7GK sing 18 n y CAE CAF 7GK doub 19 n y CAE CAD 7GK sing 20 n y CAF NAC 7GK sing 21 n y NAW CAK 7GK trip 22 n n CAK CAD 7GK sing 23 n n CAD CAA 7GK doub 24 n y NAC CAB 7GK doub 25 n y CAA CAB 7GK sing 26 n y CAR H1 7GK sing 27 n n CAR H2 7GK sing 28 n n CAS H3 7GK sing 29 n n CAS H4 7GK sing 30 n n NAT H5 7GK sing 31 n n CAU H7 7GK sing 32 n n CAU H8 7GK sing 33 n n CAV H9 7GK sing 34 n n CAV H10 7GK sing 35 n n CAO H11 7GK sing 36 n n CAP H12 7GK sing 37 n n CAM H13 7GK sing 38 n n CAL H14 7GK sing 39 n n CAI H15 7GK sing 40 n n CAA H16 7GK sing 41 n n CAB H17 7GK sing 42 n n NAG H18 7GK sing 43 n n # _atom_sites.entry_id 5TOE _atom_sites.fract_transf_matrix[1][1] 0.010283 _atom_sites.fract_transf_matrix[1][2] 0.005937 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7GK A 1 401 1 7GK INH . C 3 HOH A 1 501 49 HOH HOH . C 3 HOH A 2 502 84 HOH HOH . C 3 HOH A 3 503 50 HOH HOH . C 3 HOH A 4 504 139 HOH HOH . C 3 HOH A 5 505 100 HOH HOH . C 3 HOH A 6 506 94 HOH HOH . C 3 HOH A 7 507 91 HOH HOH . C 3 HOH A 8 508 12 HOH HOH . C 3 HOH A 9 509 44 HOH HOH . C 3 HOH A 10 510 45 HOH HOH . C 3 HOH A 11 511 135 HOH HOH . C 3 HOH A 12 512 69 HOH HOH . C 3 HOH A 13 513 140 HOH HOH . C 3 HOH A 14 514 85 HOH HOH . C 3 HOH A 15 515 53 HOH HOH . C 3 HOH A 16 516 40 HOH HOH . C 3 HOH A 17 517 5 HOH HOH . C 3 HOH A 18 518 55 HOH HOH . C 3 HOH A 19 519 32 HOH HOH . C 3 HOH A 20 520 33 HOH HOH . C 3 HOH A 21 521 2 HOH HOH . C 3 HOH A 22 522 80 HOH HOH . C 3 HOH A 23 523 34 HOH HOH . C 3 HOH A 24 524 25 HOH HOH . C 3 HOH A 25 525 18 HOH HOH . C 3 HOH A 26 526 119 HOH HOH . C 3 HOH A 27 527 58 HOH HOH . C 3 HOH A 28 528 8 HOH HOH . C 3 HOH A 29 529 14 HOH HOH . C 3 HOH A 30 530 90 HOH HOH . C 3 HOH A 31 531 21 HOH HOH . C 3 HOH A 32 532 61 HOH HOH . C 3 HOH A 33 533 56 HOH HOH . C 3 HOH A 34 534 48 HOH HOH . C 3 HOH A 35 535 11 HOH HOH . C 3 HOH A 36 536 71 HOH HOH . C 3 HOH A 37 537 81 HOH HOH . C 3 HOH A 38 538 9 HOH HOH . C 3 HOH A 39 539 103 HOH HOH . C 3 HOH A 40 540 29 HOH HOH . C 3 HOH A 41 541 54 HOH HOH . C 3 HOH A 42 542 27 HOH HOH . C 3 HOH A 43 543 41 HOH HOH . C 3 HOH A 44 544 134 HOH HOH . C 3 HOH A 45 545 36 HOH HOH . C 3 HOH A 46 546 16 HOH HOH . C 3 HOH A 47 547 22 HOH HOH . C 3 HOH A 48 548 111 HOH HOH . C 3 HOH A 49 549 76 HOH HOH . C 3 HOH A 50 550 107 HOH HOH . C 3 HOH A 51 551 86 HOH HOH . C 3 HOH A 52 552 79 HOH HOH . C 3 HOH A 53 553 82 HOH HOH . C 3 HOH A 54 554 98 HOH HOH . C 3 HOH A 55 555 120 HOH HOH . C 3 HOH A 56 556 46 HOH HOH . C 3 HOH A 57 557 51 HOH HOH . C 3 HOH A 58 558 13 HOH HOH . C 3 HOH A 59 559 87 HOH HOH . C 3 HOH A 60 560 95 HOH HOH . C 3 HOH A 61 561 118 HOH HOH . C 3 HOH A 62 562 77 HOH HOH . C 3 HOH A 63 563 67 HOH HOH . C 3 HOH A 64 564 52 HOH HOH . C 3 HOH A 65 565 38 HOH HOH . C 3 HOH A 66 566 128 HOH HOH . C 3 HOH A 67 567 42 HOH HOH . C 3 HOH A 68 568 137 HOH HOH . C 3 HOH A 69 569 89 HOH HOH . C 3 HOH A 70 570 116 HOH HOH . C 3 HOH A 71 571 6 HOH HOH . C 3 HOH A 72 572 37 HOH HOH . C 3 HOH A 73 573 43 HOH HOH . C 3 HOH A 74 574 10 HOH HOH . C 3 HOH A 75 575 35 HOH HOH . C 3 HOH A 76 576 57 HOH HOH . C 3 HOH A 77 577 4 HOH HOH . C 3 HOH A 78 578 88 HOH HOH . C 3 HOH A 79 579 28 HOH HOH . C 3 HOH A 80 580 93 HOH HOH . C 3 HOH A 81 581 122 HOH HOH . C 3 HOH A 82 582 47 HOH HOH . C 3 HOH A 83 583 112 HOH HOH . C 3 HOH A 84 584 125 HOH HOH . C 3 HOH A 85 585 106 HOH HOH . C 3 HOH A 86 586 30 HOH HOH . C 3 HOH A 87 587 15 HOH HOH . C 3 HOH A 88 588 64 HOH HOH . C 3 HOH A 89 589 75 HOH HOH . C 3 HOH A 90 590 3 HOH HOH . C 3 HOH A 91 591 23 HOH HOH . C 3 HOH A 92 592 59 HOH HOH . C 3 HOH A 93 593 115 HOH HOH . C 3 HOH A 94 594 124 HOH HOH . C 3 HOH A 95 595 7 HOH HOH . C 3 HOH A 96 596 99 HOH HOH . C 3 HOH A 97 597 17 HOH HOH . C 3 HOH A 98 598 65 HOH HOH . C 3 HOH A 99 599 110 HOH HOH . C 3 HOH A 100 600 26 HOH HOH . C 3 HOH A 101 601 1 HOH HOH . C 3 HOH A 102 602 19 HOH HOH . C 3 HOH A 103 603 24 HOH HOH . C 3 HOH A 104 604 133 HOH HOH . C 3 HOH A 105 605 60 HOH HOH . C 3 HOH A 106 606 72 HOH HOH . C 3 HOH A 107 607 73 HOH HOH . C 3 HOH A 108 608 39 HOH HOH . C 3 HOH A 109 609 70 HOH HOH . C 3 HOH A 110 610 114 HOH HOH . C 3 HOH A 111 611 62 HOH HOH . C 3 HOH A 112 612 141 HOH HOH . C 3 HOH A 113 613 132 HOH HOH . C 3 HOH A 114 614 109 HOH HOH . C 3 HOH A 115 615 117 HOH HOH . C 3 HOH A 116 616 142 HOH HOH . C 3 HOH A 117 617 20 HOH HOH . C 3 HOH A 118 618 66 HOH HOH . C 3 HOH A 119 619 92 HOH HOH . C 3 HOH A 120 620 63 HOH HOH . C 3 HOH A 121 621 105 HOH HOH . C 3 HOH A 122 622 74 HOH HOH . C 3 HOH A 123 623 129 HOH HOH . C 3 HOH A 124 624 138 HOH HOH . C 3 HOH A 125 625 123 HOH HOH . C 3 HOH A 126 626 83 HOH HOH . C 3 HOH A 127 627 68 HOH HOH . C 3 HOH A 128 628 101 HOH HOH . C 3 HOH A 129 629 96 HOH HOH . C 3 HOH A 130 630 78 HOH HOH . C 3 HOH A 131 631 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAR 7GK . . . B 2 22.069 35.545 -8.22 1 59.06 ? CAR 7GK 401 A 1 HETATM 2 C CAS 7GK . . . B 2 22.836 35.205 -9.488 1 64.24 ? CAS 7GK 401 A 1 HETATM 3 N NAT 7GK . . . B 2 22.42 33.923 -10.089 1 54.06 ? NAT 7GK 401 A 1 HETATM 4 C CAU 7GK . . . B 2 22.71 32.921 -9.044 1 57.41 ? CAU 7GK 401 A 1 HETATM 5 C CAV 7GK . . . B 2 21.937 33.163 -7.757 1 57.54 ? CAV 7GK 401 A 1 HETATM 6 N NAQ 7GK . . . B 2 22.272 34.488 -7.221 1 55.89 ? NAQ 7GK 401 A 1 HETATM 7 C CAN 7GK . . . B 2 22.373 34.736 -5.91 1 49.97 ? CAN 7GK 401 A 1 HETATM 8 C CAO 7GK . . . B 2 22.694 36.013 -5.465 1 44.15 ? CAO 7GK 401 A 1 HETATM 9 C CAP 7GK . . . B 2 22.8 36.267 -4.103 1 43.14 ? CAP 7GK 401 A 1 HETATM 10 C CAM 7GK . . . B 2 22.157 33.714 -4.994 1 50.68 ? CAM 7GK 401 A 1 HETATM 11 C CAL 7GK . . . B 2 22.261 33.969 -3.632 1 44.99 ? CAL 7GK 401 A 1 HETATM 12 C CAJ 7GK . . . B 2 22.584 35.245 -3.186 1 40.86 ? CAJ 7GK 401 A 1 HETATM 13 C CAH 7GK . . . B 2 22.684 35.483 -1.882 1 39.68 ? CAH 7GK 401 A 1 HETATM 14 C CAI 7GK . . . B 2 23.012 36.648 -1.34 1 36.37 ? CAI 7GK 401 A 1 HETATM 15 C CAE 7GK . . . B 2 23.012 36.47 -0.02 1 36.61 ? CAE 7GK 401 A 1 HETATM 16 C CAD 7GK . . . B 2 23.269 37.321 0.973 1 36.54 ? CAD 7GK 401 A 1 HETATM 17 C CAK 7GK . . . B 2 23.613 38.674 0.678 1 36.96 ? CAK 7GK 401 A 1 HETATM 18 N NAW 7GK . . . B 2 23.887 39.749 0.446 1 41.17 ? NAW 7GK 401 A 1 HETATM 19 C CAA 7GK . . . B 2 23.206 36.902 2.295 1 35.7 ? CAA 7GK 401 A 1 HETATM 20 C CAB 7GK . . . B 2 22.87 35.585 2.563 1 35.86 ? CAB 7GK 401 A 1 HETATM 21 N NAC 7GK . . . B 2 22.611 34.736 1.486 1 36.35 ? NAC 7GK 401 A 1 HETATM 22 C CAF 7GK . . . B 2 22.687 35.196 0.229 1 38.73 ? CAF 7GK 401 A 1 HETATM 23 N NAG 7GK . . . B 2 22.487 34.581 -0.933 1 40.38 ? NAG 7GK 401 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #