data_5TPW # _model_server_result.job_id mTajwyRAQgIoAneLOBBSQQ _model_server_result.datetime_utc '2024-10-28 02:23:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tpw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":504}' # _entry.id 5TPW # _exptl.entry_id 5TPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TPW _cell.length_a 79.56 _cell.length_b 118.401 _cell.length_c 155.812 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N ? 6 I N N ? 6 M N N ? 6 N N N ? 6 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 56 A CYS 79 1_555 A SG CYS 306 A CYS 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 54 B CYS 87 1_555 B SG CYS 287 B CYS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 C SG CYS 22 H CYS 22 1_555 C SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 C SG CYS 146 H CYS 146 1_555 C SG CYS 201 H CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 D SG CYS 23 L CYS 23 1_555 D SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 D SG CYS 134 L CYS 134 1_555 D SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A ND2 ASN 274 A ASN 297 1_555 E C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 366 A ASN 389 1_555 F C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? metalc ? metalc1 B NE2 HIS 11 B HIS 44 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc2 B NE2 HIS 95 B HIS 128 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc3 B OE2 GLU 233 B GLU 266 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc4 B OD1 ASP 249 B ASP 282 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc5 B OD2 ASP 249 B ASP 282 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 333 n n S O2 SO4 doub 334 n n S O3 SO4 sing 335 n n S O4 SO4 sing 336 n n # _atom_sites.entry_id 5TPW _atom_sites.fract_transf_matrix[1][1] 0.012569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008446 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG A 1 501 1 NAG NAG . F 5 NAG A 1 502 2 NAG NAG . G 6 SO4 A 1 503 3 SO4 SO4 . H 6 SO4 A 1 504 4 SO4 SO4 . I 6 SO4 A 1 505 6 SO4 SO4 . J 7 GOL A 1 506 1 GOL GOL . K 7 GOL A 1 507 2 GOL GOL . L 8 ZN B 1 401 1 ZN ZN . M 6 SO4 B 1 402 1 SO4 SO4 . N 6 SO4 B 1 403 2 SO4 SO4 . O 6 SO4 B 1 404 5 SO4 SO4 . P 9 HOH A 1 601 40 HOH HOH . P 9 HOH A 2 602 64 HOH HOH . P 9 HOH A 3 603 59 HOH HOH . P 9 HOH A 4 604 11 HOH HOH . P 9 HOH A 5 605 62 HOH HOH . P 9 HOH A 6 606 26 HOH HOH . P 9 HOH A 7 607 60 HOH HOH . P 9 HOH A 8 608 6 HOH HOH . P 9 HOH A 9 609 3 HOH HOH . P 9 HOH A 10 610 38 HOH HOH . P 9 HOH A 11 611 27 HOH HOH . P 9 HOH A 12 612 41 HOH HOH . P 9 HOH A 13 613 63 HOH HOH . P 9 HOH A 14 614 4 HOH HOH . P 9 HOH A 15 615 39 HOH HOH . P 9 HOH A 16 616 37 HOH HOH . P 9 HOH A 17 617 34 HOH HOH . P 9 HOH A 18 618 9 HOH HOH . P 9 HOH A 19 619 61 HOH HOH . Q 9 HOH B 1 501 21 HOH HOH . Q 9 HOH B 2 502 46 HOH HOH . Q 9 HOH B 3 503 16 HOH HOH . Q 9 HOH B 4 504 15 HOH HOH . Q 9 HOH B 5 505 17 HOH HOH . Q 9 HOH B 6 506 18 HOH HOH . Q 9 HOH B 7 507 44 HOH HOH . R 9 HOH H 1 301 66 HOH HOH . R 9 HOH H 2 302 52 HOH HOH . R 9 HOH H 3 303 51 HOH HOH . R 9 HOH H 4 304 24 HOH HOH . R 9 HOH H 5 305 47 HOH HOH . S 9 HOH L 1 301 56 HOH HOH . S 9 HOH L 2 302 58 HOH HOH . S 9 HOH L 3 303 57 HOH HOH . S 9 HOH L 4 304 53 HOH HOH . S 9 HOH L 5 305 54 HOH HOH . S 9 HOH L 6 306 68 HOH HOH . S 9 HOH L 7 307 33 HOH HOH . S 9 HOH L 8 308 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 6 -6.256 55.951 -16.361 1 36.86 ? S SO4 504 A 1 HETATM 2 O O1 SO4 . . . H 6 -5.011 55.187 -16.579 1 39.3 ? O1 SO4 504 A 1 HETATM 3 O O2 SO4 . . . H 6 -7.174 55.676 -17.48 1 41.55 ? O2 SO4 504 A 1 HETATM 4 O O3 SO4 . . . H 6 -6.902 55.545 -15.095 1 60.62 ? O3 SO4 504 A 1 HETATM 5 O O4 SO4 . . . H 6 -5.96 57.393 -16.348 1 73 ? O4 SO4 504 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #