data_5TU6 # _model_server_result.job_id Gfg1iwbSlOln64pHXEyBXw _model_server_result.datetime_utc '2024-11-23 20:37:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5TU6 # _exptl.entry_id 5TU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TU6 _cell.length_a 116.49 _cell.length_b 116.49 _cell.length_c 43.58 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 125 A ASP 125 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc2 A OE1 GLU 184 A GLU 184 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc3 C MG MG . A MG 401 1_555 F O7 DST . A DST 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc4 C MG MG . A MG 401 1_555 F O5 DST . A DST 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc5 C MG MG . A MG 401 1_555 G O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc6 C MG MG . A MG 401 1_555 G O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc7 C MG MG . A MG 401 1_555 G O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc8 D MG MG . A MG 402 1_555 F O6 DST . A DST 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc9 D MG MG . A MG 402 1_555 G O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc10 D MG MG . A MG 402 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc11 D MG MG . A MG 402 1_555 G O HOH . A HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc12 D MG MG . A MG 402 1_555 G O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TU6 _atom_sites.fract_transf_matrix[1][1] 0.008584 _atom_sites.fract_transf_matrix[1][2] 0.004956 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009912 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 401 301 MG MG . D 3 MG A 1 402 302 MG MG . E 4 MET A 1 403 297 MET MET . F 5 DST A 1 404 300 DST DST . G 6 HOH A 1 501 156 HOH HOH . G 6 HOH A 2 502 12 HOH HOH . G 6 HOH A 3 503 94 HOH HOH . G 6 HOH A 4 504 27 HOH HOH . G 6 HOH A 5 505 35 HOH HOH . G 6 HOH A 6 506 158 HOH HOH . G 6 HOH A 7 507 116 HOH HOH . G 6 HOH A 8 508 128 HOH HOH . G 6 HOH A 9 509 49 HOH HOH . G 6 HOH A 10 510 99 HOH HOH . G 6 HOH A 11 511 161 HOH HOH . G 6 HOH A 12 512 151 HOH HOH . G 6 HOH A 13 513 59 HOH HOH . G 6 HOH A 14 514 5 HOH HOH . G 6 HOH A 15 515 88 HOH HOH . G 6 HOH A 16 516 53 HOH HOH . G 6 HOH A 17 517 4 HOH HOH . G 6 HOH A 18 518 86 HOH HOH . G 6 HOH A 19 519 18 HOH HOH . G 6 HOH A 20 520 38 HOH HOH . G 6 HOH A 21 521 51 HOH HOH . G 6 HOH A 22 522 66 HOH HOH . G 6 HOH A 23 523 164 HOH HOH . G 6 HOH A 24 524 10 HOH HOH . G 6 HOH A 25 525 54 HOH HOH . G 6 HOH A 26 526 61 HOH HOH . G 6 HOH A 27 527 85 HOH HOH . G 6 HOH A 28 528 152 HOH HOH . G 6 HOH A 29 529 155 HOH HOH . G 6 HOH A 30 530 112 HOH HOH . G 6 HOH A 31 531 153 HOH HOH . G 6 HOH A 32 532 31 HOH HOH . G 6 HOH A 33 533 73 HOH HOH . G 6 HOH A 34 534 58 HOH HOH . G 6 HOH A 35 535 110 HOH HOH . G 6 HOH A 36 536 3 HOH HOH . G 6 HOH A 37 537 149 HOH HOH . G 6 HOH A 38 538 62 HOH HOH . G 6 HOH A 39 539 139 HOH HOH . G 6 HOH A 40 540 83 HOH HOH . G 6 HOH A 41 541 29 HOH HOH . G 6 HOH A 42 542 57 HOH HOH . G 6 HOH A 43 543 160 HOH HOH . G 6 HOH A 44 544 16 HOH HOH . G 6 HOH A 45 545 46 HOH HOH . G 6 HOH A 46 546 65 HOH HOH . G 6 HOH A 47 547 7 HOH HOH . G 6 HOH A 48 548 67 HOH HOH . G 6 HOH A 49 549 105 HOH HOH . G 6 HOH A 50 550 104 HOH HOH . G 6 HOH A 51 551 34 HOH HOH . G 6 HOH A 52 552 126 HOH HOH . G 6 HOH A 53 553 13 HOH HOH . G 6 HOH A 54 554 72 HOH HOH . G 6 HOH A 55 555 107 HOH HOH . G 6 HOH A 56 556 127 HOH HOH . G 6 HOH A 57 557 78 HOH HOH . G 6 HOH A 58 558 148 HOH HOH . G 6 HOH A 59 559 75 HOH HOH . G 6 HOH A 60 560 56 HOH HOH . G 6 HOH A 61 561 70 HOH HOH . G 6 HOH A 62 562 154 HOH HOH . G 6 HOH A 63 563 81 HOH HOH . G 6 HOH A 64 564 90 HOH HOH . G 6 HOH A 65 565 123 HOH HOH . G 6 HOH A 66 566 74 HOH HOH . G 6 HOH A 67 567 109 HOH HOH . G 6 HOH A 68 568 21 HOH HOH . G 6 HOH A 69 569 97 HOH HOH . G 6 HOH A 70 570 92 HOH HOH . G 6 HOH A 71 571 71 HOH HOH . G 6 HOH A 72 572 64 HOH HOH . G 6 HOH A 73 573 101 HOH HOH . G 6 HOH A 74 574 103 HOH HOH . G 6 HOH A 75 575 119 HOH HOH . G 6 HOH A 76 576 19 HOH HOH . G 6 HOH A 77 577 117 HOH HOH . G 6 HOH A 78 578 162 HOH HOH . G 6 HOH A 79 579 163 HOH HOH . G 6 HOH A 80 580 20 HOH HOH . G 6 HOH A 81 581 17 HOH HOH . G 6 HOH A 82 582 50 HOH HOH . G 6 HOH A 83 583 89 HOH HOH . G 6 HOH A 84 584 150 HOH HOH . G 6 HOH A 85 585 69 HOH HOH . G 6 HOH A 86 586 47 HOH HOH . G 6 HOH A 87 587 142 HOH HOH . G 6 HOH A 88 588 125 HOH HOH . G 6 HOH A 89 589 133 HOH HOH . G 6 HOH A 90 590 33 HOH HOH . G 6 HOH A 91 591 141 HOH HOH . G 6 HOH A 92 592 102 HOH HOH . G 6 HOH A 93 593 135 HOH HOH . G 6 HOH A 94 594 24 HOH HOH . G 6 HOH A 95 595 136 HOH HOH . G 6 HOH A 96 596 91 HOH HOH . G 6 HOH A 97 597 113 HOH HOH . G 6 HOH A 98 598 6 HOH HOH . G 6 HOH A 99 599 68 HOH HOH . G 6 HOH A 100 600 26 HOH HOH . G 6 HOH A 101 601 87 HOH HOH . G 6 HOH A 102 602 118 HOH HOH . G 6 HOH A 103 603 159 HOH HOH . G 6 HOH A 104 604 106 HOH HOH . G 6 HOH A 105 605 115 HOH HOH . G 6 HOH A 106 606 120 HOH HOH . G 6 HOH A 107 607 121 HOH HOH . G 6 HOH A 108 608 157 HOH HOH . G 6 HOH A 109 609 79 HOH HOH . G 6 HOH A 110 610 80 HOH HOH . G 6 HOH A 111 611 122 HOH HOH . G 6 HOH A 112 612 111 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.104 _atom_site.Cartn_y 94.105 _atom_site.Cartn_z -6.052 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #