data_5TUM
#
_model_server_result.job_id            qWDt8eh6TcGFKtjODBXQzg 
_model_server_result.datetime_utc      '2024-11-30 03:20:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tum 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5TUM 
#
_exptl.entry_id    5TUM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TUM 
_cell.length_a            76.45 
_cell.length_b            114.01 
_cell.length_c            94.84 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5TUM 
_atom_sites.fract_transf_matrix[1][1]    0.01308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 401 1 FAD FAD . 
D 2 FAD B 1 401 2 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 86.503 145.96 129.965 1 62.48 ? PA FAD 401 A 1 
HETATM 2 O O1A FAD . . . C 2 86.551 144.7 130.799 1 71.79 ? O1A FAD 401 A 1 
HETATM 3 O O2A FAD . . . C 2 87.043 145.94 128.554 1 66.82 ? O2A FAD 401 A 1 
HETATM 4 O O5B FAD . . . C 2 84.983 146.477 129.957 1 67.95 ? O5B FAD 401 A 1 
HETATM 5 C C5B FAD . . . C 2 84.626 147.636 129.209 1 68.61 ? C5B FAD 401 A 1 
HETATM 6 C C4B FAD . . . C 2 83.293 148.149 129.732 1 71.6 ? C4B FAD 401 A 1 
HETATM 7 O O4B FAD . . . C 2 82.978 149.392 129.103 1 72.28 ? O4B FAD 401 A 1 
HETATM 8 C C3B FAD . . . C 2 82.172 147.166 129.443 1 76.54 ? C3B FAD 401 A 1 
HETATM 9 O O3B FAD . . . C 2 81.633 146.654 130.667 1 82.91 ? O3B FAD 401 A 1 
HETATM 10 C C2B FAD . . . C 2 81.149 147.947 128.637 1 72.42 ? C2B FAD 401 A 1 
HETATM 11 O O2B FAD . . . C 2 79.86 147.892 129.255 1 73.91 ? O2B FAD 401 A 1 
HETATM 12 C C1B FAD . . . C 2 81.651 149.38 128.579 1 72.32 ? C1B FAD 401 A 1 
HETATM 13 N N9A FAD . . . C 2 81.683 149.895 127.184 1 68.05 ? N9A FAD 401 A 1 
HETATM 14 C C8A FAD . . . C 2 82.309 149.319 126.133 1 67.99 ? C8A FAD 401 A 1 
HETATM 15 N N7A FAD . . . C 2 82.151 150.065 125.009 1 68.67 ? N7A FAD 401 A 1 
HETATM 16 C C5A FAD . . . C 2 81.419 151.145 125.331 1 67.58 ? C5A FAD 401 A 1 
HETATM 17 C C6A FAD . . . C 2 80.896 152.328 124.612 1 65.92 ? C6A FAD 401 A 1 
HETATM 18 N N6A FAD . . . C 2 81.135 152.498 123.289 1 63.73 ? N6A FAD 401 A 1 
HETATM 19 N N1A FAD . . . C 2 80.175 153.219 125.323 1 65.5 ? N1A FAD 401 A 1 
HETATM 20 C C2A FAD . . . C 2 79.931 153.055 126.636 1 63.18 ? C2A FAD 401 A 1 
HETATM 21 N N3A FAD . . . C 2 80.38 152.003 127.34 1 59.33 ? N3A FAD 401 A 1 
HETATM 22 C C4A FAD . . . C 2 81.114 151.029 126.762 1 65.1 ? C4A FAD 401 A 1 
HETATM 23 N N1 FAD . . . C 2 89.109 138.486 129.647 1 84.36 ? N1 FAD 401 A 1 
HETATM 24 C C2 FAD . . . C 2 89.501 137.201 129.813 1 89.16 ? C2 FAD 401 A 1 
HETATM 25 O O2 FAD . . . C 2 90.714 136.934 129.703 1 90.33 ? O2 FAD 401 A 1 
HETATM 26 N N3 FAD . . . C 2 88.641 136.208 130.092 1 91.09 ? N3 FAD 401 A 1 
HETATM 27 C C4 FAD . . . C 2 87.33 136.428 130.222 1 87.81 ? C4 FAD 401 A 1 
HETATM 28 O O4 FAD . . . C 2 86.554 135.488 130.481 1 88.54 ? O4 FAD 401 A 1 
HETATM 29 C C4X FAD . . . C 2 86.81 137.803 130.056 1 82.52 ? C4X FAD 401 A 1 
HETATM 30 N N5 FAD . . . C 2 85.503 138.104 130.172 1 80.65 ? N5 FAD 401 A 1 
HETATM 31 C C5X FAD . . . C 2 85.071 139.371 130.012 1 79.34 ? C5X FAD 401 A 1 
HETATM 32 C C6 FAD . . . C 2 83.713 139.612 130.145 1 79.41 ? C6 FAD 401 A 1 
HETATM 33 C C7 FAD . . . C 2 83.21 140.893 129.995 1 77.72 ? C7 FAD 401 A 1 
HETATM 34 C C7M FAD . . . C 2 81.731 141.14 130.141 1 75.97 ? C7M FAD 401 A 1 
HETATM 35 C C8 FAD . . . C 2 84.146 142.01 129.68 1 75.39 ? C8 FAD 401 A 1 
HETATM 36 C C8M FAD . . . C 2 83.643 143.421 129.509 1 73.14 ? C8M FAD 401 A 1 
HETATM 37 C C9 FAD . . . C 2 85.516 141.774 129.552 1 76.91 ? C9 FAD 401 A 1 
HETATM 38 C C9A FAD . . . C 2 86.021 140.483 129.706 1 78.35 ? C9A FAD 401 A 1 
HETATM 39 N N10 FAD . . . C 2 87.404 140.175 129.573 1 79.74 ? N10 FAD 401 A 1 
HETATM 40 C C10 FAD . . . C 2 87.811 138.843 129.752 1 82.85 ? C10 FAD 401 A 1 
HETATM 41 C C1' FAD . . . C 2 88.444 141.171 129.282 1 79.92 ? C1' FAD 401 A 1 
HETATM 42 C C2' FAD . . . C 2 89.093 141.635 130.586 1 79.23 ? C2' FAD 401 A 1 
HETATM 43 O O2' FAD . . . C 2 88.151 141.526 131.663 1 82.85 ? O2' FAD 401 A 1 
HETATM 44 C C3' FAD . . . C 2 89.577 143.079 130.444 1 79.46 ? C3' FAD 401 A 1 
HETATM 45 O O3' FAD . . . C 2 90.551 143.11 129.396 1 80.97 ? O3' FAD 401 A 1 
HETATM 46 C C4' FAD . . . C 2 90.19 143.656 131.724 1 78.55 ? C4' FAD 401 A 1 
HETATM 47 O O4' FAD . . . C 2 89.375 143.327 132.856 1 82.23 ? O4' FAD 401 A 1 
HETATM 48 C C5' FAD . . . C 2 90.346 145.173 131.638 1 75.82 ? C5' FAD 401 A 1 
HETATM 49 O O5' FAD . . . C 2 89.055 145.769 131.604 1 71.93 ? O5' FAD 401 A 1 
HETATM 50 P P FAD . . . C 2 88.804 147.203 130.936 1 80.19 ? P FAD 401 A 1 
HETATM 51 O O1P FAD . . . C 2 89.166 148.269 131.94 1 83.28 ? O1P FAD 401 A 1 
HETATM 52 O O2P FAD . . . C 2 89.426 147.175 129.563 1 77.43 ? O2P FAD 401 A 1 
HETATM 53 O O3P FAD . . . C 2 87.205 147.152 130.791 1 69.43 ? O3P FAD 401 A 1 
HETATM 54 H H51A FAD . . . C 2 84.541 147.385 128.15 1 82.33 ? H51A FAD 401 A 1 
HETATM 55 H H52A FAD . . . C 2 85.393 148.405 129.322 1 82.33 ? H52A FAD 401 A 1 
HETATM 56 H H4B FAD . . . C 2 83.369 148.288 130.82 1 85.92 ? H4B FAD 401 A 1 
HETATM 57 H H3B FAD . . . C 2 82.565 146.345 128.826 1 91.85 ? H3B FAD 401 A 1 
HETATM 58 H HO3A FAD . . . C 2 80.883 146.076 130.472 1 99.49 ? HO3A FAD 401 A 1 
HETATM 59 H H2B FAD . . . C 2 81.102 147.539 127.618 1 86.91 ? H2B FAD 401 A 1 
HETATM 60 H HO2A FAD . . . C 2 79.52 146.988 129.212 1 88.69 ? HO2A FAD 401 A 1 
HETATM 61 H H1B FAD . . . C 2 80.997 150.01 129.197 1 86.78 ? H1B FAD 401 A 1 
HETATM 62 H H8A FAD . . . C 2 82.858 148.387 126.18 1 81.58 ? H8A FAD 401 A 1 
HETATM 63 H H61A FAD . . . C 2 80.77 153.309 122.81 1 76.47 ? H61A FAD 401 A 1 
HETATM 64 H H62A FAD . . . C 2 81.676 151.813 122.782 1 76.47 ? H62A FAD 401 A 1 
HETATM 65 H H2A FAD . . . C 2 79.346 153.808 127.151 1 75.82 ? H2A FAD 401 A 1 
HETATM 66 H HN3 FAD . . . C 2 89.006 135.241 130.209 1 109.31 ? HN3 FAD 401 A 1 
HETATM 67 H H6 FAD . . . C 2 83.041 138.793 130.37 1 95.3 ? H6 FAD 401 A 1 
HETATM 68 H HM71 FAD . . . C 2 81.509 141.363 131.152 1 91.16 ? HM71 FAD 401 A 1 
HETATM 69 H HM72 FAD . . . C 2 81.198 140.275 129.845 1 91.16 ? HM72 FAD 401 A 1 
HETATM 70 H HM73 FAD . . . C 2 81.448 141.957 129.528 1 91.16 ? HM73 FAD 401 A 1 
HETATM 71 H HM81 FAD . . . C 2 83.405 143.59 128.491 1 87.77 ? HM81 FAD 401 A 1 
HETATM 72 H HM82 FAD . . . C 2 84.394 144.103 129.814 1 87.77 ? HM82 FAD 401 A 1 
HETATM 73 H HM83 FAD . . . C 2 82.777 143.561 130.101 1 87.77 ? HM83 FAD 401 A 1 
HETATM 74 H H9 FAD . . . C 2 86.186 142.593 129.325 1 92.3 ? H9 FAD 401 A 1 
HETATM 75 H "H1'1" FAD . . . C 2 88.002 142.026 128.766 1 95.9 ? "H1'1" FAD 401 A 1 
HETATM 76 H "H1'2" FAD . . . C 2 89.202 140.733 128.629 1 95.9 ? "H1'2" FAD 401 A 1 
HETATM 77 H H2' FAD . . . C 2 89.962 140.994 130.791 1 95.08 ? H2' FAD 401 A 1 
HETATM 78 H HO2' FAD . . . C 2 87.391 142.098 131.485 1 99.41 ? HO2' FAD 401 A 1 
HETATM 79 H H3' FAD . . . C 2 88.718 143.704 130.163 1 95.35 ? H3' FAD 401 A 1 
HETATM 80 H HO3' FAD . . . C 2 91.319 142.581 129.653 1 97.17 ? HO3' FAD 401 A 1 
HETATM 81 H H4' FAD . . . C 2 91.188 143.215 131.855 1 94.26 ? H4' FAD 401 A 1 
HETATM 82 H HO4' FAD . . . C 2 88.505 143.737 132.756 1 98.68 ? HO4' FAD 401 A 1 
HETATM 83 H "H5'1" FAD . . . C 2 90.902 145.539 132.503 1 90.98 ? "H5'1" FAD 401 A 1 
HETATM 84 H "H5'2" FAD . . . C 2 90.901 145.439 130.736 1 90.98 ? "H5'2" FAD 401 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           84 
#