data_5TUM
#
_model_server_result.job_id            qn8ymmH8DIUfTidh9_avUw 
_model_server_result.datetime_utc      '2024-11-26 18:37:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tum 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    5TUM 
#
_exptl.entry_id    5TUM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TUM 
_cell.length_a            76.45 
_cell.length_b            114.01 
_cell.length_c            94.84 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TUM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C 1 1 
B,D 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     5TUM 
_atom_sites.fract_transf_matrix[1][1]    0.01308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010544 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 401 1 FAD FAD . 
D 2 FAD B 1 401 2 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 2 56.059 153.629 107.155 1 76.62 ? PA FAD 401 B 1 
HETATM 2 O O1A FAD . . . D 2 56.014 153.009 105.78 1 80.59 ? O1A FAD 401 B 1 
HETATM 3 O O2A FAD . . . D 2 55.801 152.778 108.376 1 74.79 ? O2A FAD 401 B 1 
HETATM 4 O O5B FAD . . . D 2 57.496 154.322 107.345 1 68.3 ? O5B FAD 401 B 1 
HETATM 5 C C5B FAD . . . D 2 58.535 153.57 107.964 1 69.08 ? C5B FAD 401 B 1 
HETATM 6 C C4B FAD . . . D 2 59.819 153.71 107.157 1 72.26 ? C4B FAD 401 B 1 
HETATM 7 O O4B FAD . . . D 2 60.551 154.841 107.636 1 72 ? O4B FAD 401 B 1 
HETATM 8 C C3B FAD . . . D 2 60.71 152.48 107.266 1 75.15 ? C3B FAD 401 B 1 
HETATM 9 O O3B FAD . . . D 2 61.038 152.003 105.958 1 77.3 ? O3B FAD 401 B 1 
HETATM 10 C C2B FAD . . . D 2 61.948 152.946 108.01 1 73.84 ? C2B FAD 401 B 1 
HETATM 11 O O2B FAD . . . D 2 63.149 152.483 107.378 1 72.75 ? O2B FAD 401 B 1 
HETATM 12 C C1B FAD . . . D 2 61.878 154.467 108.019 1 75.17 ? C1B FAD 401 B 1 
HETATM 13 N N9A FAD . . . D 2 62.158 154.961 109.389 1 69.36 ? N9A FAD 401 B 1 
HETATM 14 C C8A FAD . . . D 2 61.334 154.801 110.442 1 70.2 ? C8A FAD 401 B 1 
HETATM 15 N N7A FAD . . . D 2 61.866 155.356 111.558 1 73.61 ? N7A FAD 401 B 1 
HETATM 16 C C5A FAD . . . D 2 63.055 155.883 111.222 1 75.18 ? C5A FAD 401 B 1 
HETATM 17 C C6A FAD . . . D 2 64.13 156.615 111.928 1 82.13 ? C6A FAD 401 B 1 
HETATM 18 N N6A FAD . . . D 2 64.028 156.899 113.25 1 84.2 ? N6A FAD 401 B 1 
HETATM 19 N N1A FAD . . . D 2 65.212 156.992 111.21 1 82.41 ? N1A FAD 401 B 1 
HETATM 20 C C2A FAD . . . D 2 65.329 156.719 109.895 1 78.75 ? C2A FAD 401 B 1 
HETATM 21 N N3A FAD . . . D 2 64.385 156.057 109.199 1 73.37 ? N3A FAD 401 B 1 
HETATM 22 C C4A FAD . . . D 2 63.248 155.619 109.791 1 72.19 ? C4A FAD 401 B 1 
HETATM 23 N N1 FAD . . . D 2 50.296 148.303 107.18 1 95.82 ? N1 FAD 401 B 1 
HETATM 24 C C2 FAD . . . D 2 49.3 147.408 106.974 1 98.69 ? C2 FAD 401 B 1 
HETATM 25 O O2 FAD . . . D 2 48.121 147.784 107.128 1 100.69 ? O2 FAD 401 B 1 
HETATM 26 N N3 FAD . . . D 2 49.528 146.135 106.611 1 99.92 ? N3 FAD 401 B 1 
HETATM 27 C C4 FAD . . . D 2 50.767 145.668 106.427 1 98.41 ? C4 FAD 401 B 1 
HETATM 28 O O4 FAD . . . D 2 50.949 144.483 106.089 1 101.29 ? O4 FAD 401 B 1 
HETATM 29 C C4X FAD . . . D 2 51.918 146.574 106.63 1 92.79 ? C4X FAD 401 B 1 
HETATM 30 N N5 FAD . . . D 2 53.195 146.173 106.463 1 91.84 ? N5 FAD 401 B 1 
HETATM 31 C C5X FAD . . . D 2 54.222 147.03 106.657 1 89.45 ? C5X FAD 401 B 1 
HETATM 32 C C6 FAD . . . D 2 55.516 146.56 106.47 1 87.82 ? C6 FAD 401 B 1 
HETATM 33 C C7 FAD . . . D 2 56.61 147.393 106.653 1 85.27 ? C7 FAD 401 B 1 
HETATM 34 C C7M FAD . . . D 2 58.005 146.858 106.446 1 83.55 ? C7M FAD 401 B 1 
HETATM 35 C C8 FAD . . . D 2 56.382 148.807 107.063 1 84.7 ? C8 FAD 401 B 1 
HETATM 36 C C8M FAD . . . D 2 57.531 149.76 107.276 1 84.33 ? C8M FAD 401 B 1 
HETATM 37 C C9 FAD . . . D 2 55.086 149.281 107.247 1 85.37 ? C9 FAD 401 B 1 
HETATM 38 C C9A FAD . . . D 2 53.984 148.445 107.061 1 88.73 ? C9A FAD 401 B 1 
HETATM 39 N N10 FAD . . . D 2 52.641 148.875 107.243 1 92.98 ? N10 FAD 401 B 1 
HETATM 40 C C10 FAD . . . D 2 51.595 147.957 107.029 1 93.05 ? C10 FAD 401 B 1 
HETATM 41 C C1' FAD . . . D 2 52.289 150.244 107.63 1 95.36 ? C1' FAD 401 B 1 
HETATM 42 C C2' FAD . . . D 2 52.228 151.115 106.37 1 96.04 ? C2' FAD 401 B 1 
HETATM 43 O O2' FAD . . . D 2 53.507 151.741 106.185 1 96 ? O2' FAD 401 B 1 
HETATM 44 C C3' FAD . . . D 2 51.127 152.179 106.457 1 99.01 ? C3' FAD 401 B 1 
HETATM 45 O O3' FAD . . . D 2 49.857 151.57 106.755 1 101.41 ? O3' FAD 401 B 1 
HETATM 46 C C4' FAD . . . D 2 50.967 152.991 105.16 1 99.69 ? C4' FAD 401 B 1 
HETATM 47 O O4' FAD . . . D 2 51.296 152.194 104.006 1 101.25 ? O4' FAD 401 B 1 
HETATM 48 C C5' FAD . . . D 2 51.805 154.277 105.154 1 98.91 ? C5' FAD 401 B 1 
HETATM 49 O O5' FAD . . . D 2 53.065 154.084 105.825 1 97.48 ? O5' FAD 401 B 1 
HETATM 50 P P FAD . . . D 2 54.114 155.317 105.972 1 88.83 ? P FAD 401 B 1 
HETATM 51 O O1P FAD . . . D 2 54.997 155.386 104.744 1 91.76 ? O1P FAD 401 B 1 
HETATM 52 O O2P FAD . . . D 2 53.384 156.575 106.399 1 92.48 ? O2P FAD 401 B 1 
HETATM 53 O O3P FAD . . . D 2 55.033 154.869 107.218 1 81.71 ? O3P FAD 401 B 1 
HETATM 54 H H51A FAD . . . D 2 58.247 152.519 108.019 1 82.89 ? H51A FAD 401 B 1 
HETATM 55 H H52A FAD . . . D 2 58.697 153.933 108.981 1 82.89 ? H52A FAD 401 B 1 
HETATM 56 H H4B FAD . . . D 2 59.555 153.858 106.101 1 86.71 ? H4B FAD 401 B 1 
HETATM 57 H H3B FAD . . . D 2 60.197 151.703 107.85 1 90.18 ? H3B FAD 401 B 1 
HETATM 58 H HO3A FAD . . . D 2 61.651 151.259 106.03 1 92.76 ? HO3A FAD 401 B 1 
HETATM 59 H H2B FAD . . . D 2 61.901 152.58 109.046 1 88.6 ? H2B FAD 401 B 1 
HETATM 60 H HO2A FAD . . . D 2 63.206 151.521 107.459 1 87.3 ? HO2A FAD 401 B 1 
HETATM 61 H H1B FAD . . . D 2 62.612 154.869 107.307 1 90.21 ? H1B FAD 401 B 1 
HETATM 62 H H8A FAD . . . D 2 60.376 154.297 110.402 1 84.24 ? H8A FAD 401 B 1 
HETATM 63 H H61A FAD . . . D 2 64.77 157.399 113.717 1 101.04 ? H61A FAD 401 B 1 
HETATM 64 H H62A FAD . . . D 2 63.211 156.609 113.767 1 101.04 ? H62A FAD 401 B 1 
HETATM 65 H H2A FAD . . . D 2 66.221 157.047 109.376 1 94.5 ? H2A FAD 401 B 1 
HETATM 66 H HN3 FAD . . . D 2 48.719 145.497 106.467 1 119.91 ? HN3 FAD 401 B 1 
HETATM 67 H H6 FAD . . . D 2 55.672 145.529 106.177 1 105.39 ? H6 FAD 401 B 1 
HETATM 68 H HM71 FAD . . . D 2 58.291 147.001 105.436 1 100.26 ? HM71 FAD 401 B 1 
HETATM 69 H HM72 FAD . . . D 2 58.024 145.825 106.676 1 100.26 ? HM72 FAD 401 B 1 
HETATM 70 H HM73 FAD . . . D 2 58.678 147.374 107.08 1 100.26 ? HM73 FAD 401 B 1 
HETATM 71 H HM81 FAD . . . D 2 57.84 149.72 108.288 1 101.19 ? HM81 FAD 401 B 1 
HETATM 72 H HM82 FAD . . . D 2 57.22 150.745 107.04 1 101.19 ? HM82 FAD 401 B 1 
HETATM 73 H HM83 FAD . . . D 2 58.338 149.486 106.648 1 101.19 ? HM83 FAD 401 B 1 
HETATM 74 H H9 FAD . . . D 2 54.931 150.312 107.54 1 102.44 ? H9 FAD 401 B 1 
HETATM 75 H "H1'1" FAD . . . D 2 53.038 150.64 108.319 1 114.43 ? "H1'1" FAD 401 B 1 
HETATM 76 H "H1'2" FAD . . . D 2 51.321 150.251 108.134 1 114.43 ? "H1'2" FAD 401 B 1 
HETATM 77 H H2' FAD . . . D 2 52.012 150.464 105.512 1 115.25 ? H2' FAD 401 B 1 
HETATM 78 H HO2' FAD . . . D 2 53.69 152.327 106.932 1 115.19 ? HO2' FAD 401 B 1 
HETATM 79 H H3' FAD . . . D 2 51.39 152.876 107.265 1 118.81 ? H3' FAD 401 B 1 
HETATM 80 H HO3' FAD . . . D 2 49.599 150.989 106.026 1 121.69 ? HO3' FAD 401 B 1 
HETATM 81 H H4' FAD . . . D 2 49.911 153.288 105.088 1 119.62 ? H4' FAD 401 B 1 
HETATM 82 H HO4' FAD . . . D 2 52.235 151.966 104.03 1 121.5 ? HO4' FAD 401 B 1 
HETATM 83 H "H5'1" FAD . . . D 2 51.988 154.586 104.122 1 118.69 ? "H5'1" FAD 401 B 1 
HETATM 84 H "H5'2" FAD . . . D 2 51.249 155.075 105.649 1 118.69 ? "H5'2" FAD 401 B 1 
#
_model_server_stats.io_time_ms              88 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           253 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           84 
#