data_5TUX # _model_server_result.job_id I1e2f5pKRwTu3y9i77O8pg _model_server_result.datetime_utc '2024-11-15 12:56:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tux # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5TUX # _exptl.entry_id 5TUX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TUX _cell.length_a 82.5 _cell.length_b 82.5 _cell.length_c 87.812 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 225 n n C1 C2 GOL sing 226 n n C1 H11 GOL sing 227 n n C1 H12 GOL sing 228 n n O1 HO1 GOL sing 229 n n C2 O2 GOL sing 230 n n C2 C3 GOL sing 231 n n C2 H2 GOL sing 232 n n O2 HO2 GOL sing 233 n n C3 O3 GOL sing 234 n n C3 H31 GOL sing 235 n n C3 H32 GOL sing 236 n n O3 HO3 GOL sing 237 n n # _atom_sites.entry_id 5TUX _atom_sites.fract_transf_matrix[1][1] 0.012121 _atom_sites.fract_transf_matrix[1][2] 0.006998 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013996 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ECH A 1 401 351 ECH ECH . C 3 GOL A 1 402 1 GOL GOL . D 4 HOH A 1 501 181 HOH HOH . D 4 HOH A 2 502 322 HOH HOH . D 4 HOH A 3 503 205 HOH HOH . D 4 HOH A 4 504 91 HOH HOH . D 4 HOH A 5 505 12 HOH HOH . D 4 HOH A 6 506 292 HOH HOH . D 4 HOH A 7 507 94 HOH HOH . D 4 HOH A 8 508 305 HOH HOH . D 4 HOH A 9 509 314 HOH HOH . D 4 HOH A 10 510 28 HOH HOH . D 4 HOH A 11 511 231 HOH HOH . D 4 HOH A 12 512 211 HOH HOH . D 4 HOH A 13 513 81 HOH HOH . D 4 HOH A 14 514 135 HOH HOH . D 4 HOH A 15 515 188 HOH HOH . D 4 HOH A 16 516 234 HOH HOH . D 4 HOH A 17 517 189 HOH HOH . D 4 HOH A 18 518 110 HOH HOH . D 4 HOH A 19 519 266 HOH HOH . D 4 HOH A 20 520 86 HOH HOH . D 4 HOH A 21 521 318 HOH HOH . D 4 HOH A 22 522 67 HOH HOH . D 4 HOH A 23 523 227 HOH HOH . D 4 HOH A 24 524 66 HOH HOH . D 4 HOH A 25 525 170 HOH HOH . D 4 HOH A 26 526 186 HOH HOH . D 4 HOH A 27 527 42 HOH HOH . D 4 HOH A 28 528 15 HOH HOH . D 4 HOH A 29 529 85 HOH HOH . D 4 HOH A 30 530 109 HOH HOH . D 4 HOH A 31 531 195 HOH HOH . D 4 HOH A 32 532 161 HOH HOH . D 4 HOH A 33 533 166 HOH HOH . D 4 HOH A 34 534 36 HOH HOH . D 4 HOH A 35 535 29 HOH HOH . D 4 HOH A 36 536 273 HOH HOH . D 4 HOH A 37 537 38 HOH HOH . D 4 HOH A 38 538 147 HOH HOH . D 4 HOH A 39 539 7 HOH HOH . D 4 HOH A 40 540 51 HOH HOH . D 4 HOH A 41 541 17 HOH HOH . D 4 HOH A 42 542 3 HOH HOH . D 4 HOH A 43 543 136 HOH HOH . D 4 HOH A 44 544 139 HOH HOH . D 4 HOH A 45 545 223 HOH HOH . D 4 HOH A 46 546 21 HOH HOH . D 4 HOH A 47 547 102 HOH HOH . D 4 HOH A 48 548 27 HOH HOH . D 4 HOH A 49 549 41 HOH HOH . D 4 HOH A 50 550 247 HOH HOH . D 4 HOH A 51 551 9 HOH HOH . D 4 HOH A 52 552 128 HOH HOH . D 4 HOH A 53 553 149 HOH HOH . D 4 HOH A 54 554 44 HOH HOH . D 4 HOH A 55 555 300 HOH HOH . D 4 HOH A 56 556 57 HOH HOH . D 4 HOH A 57 557 106 HOH HOH . D 4 HOH A 58 558 153 HOH HOH . D 4 HOH A 59 559 290 HOH HOH . D 4 HOH A 60 560 82 HOH HOH . D 4 HOH A 61 561 275 HOH HOH . D 4 HOH A 62 562 22 HOH HOH . D 4 HOH A 63 563 185 HOH HOH . D 4 HOH A 64 564 299 HOH HOH . D 4 HOH A 65 565 178 HOH HOH . D 4 HOH A 66 566 60 HOH HOH . D 4 HOH A 67 567 83 HOH HOH . D 4 HOH A 68 568 313 HOH HOH . D 4 HOH A 69 569 107 HOH HOH . D 4 HOH A 70 570 69 HOH HOH . D 4 HOH A 71 571 8 HOH HOH . D 4 HOH A 72 572 248 HOH HOH . D 4 HOH A 73 573 45 HOH HOH . D 4 HOH A 74 574 48 HOH HOH . D 4 HOH A 75 575 46 HOH HOH . D 4 HOH A 76 576 158 HOH HOH . D 4 HOH A 77 577 76 HOH HOH . D 4 HOH A 78 578 71 HOH HOH . D 4 HOH A 79 579 325 HOH HOH . D 4 HOH A 80 580 214 HOH HOH . D 4 HOH A 81 581 54 HOH HOH . D 4 HOH A 82 582 148 HOH HOH . D 4 HOH A 83 583 95 HOH HOH . D 4 HOH A 84 584 5 HOH HOH . D 4 HOH A 85 585 237 HOH HOH . D 4 HOH A 86 586 225 HOH HOH . D 4 HOH A 87 587 172 HOH HOH . D 4 HOH A 88 588 199 HOH HOH . D 4 HOH A 89 589 98 HOH HOH . D 4 HOH A 90 590 50 HOH HOH . D 4 HOH A 91 591 89 HOH HOH . D 4 HOH A 92 592 2 HOH HOH . D 4 HOH A 93 593 137 HOH HOH . D 4 HOH A 94 594 184 HOH HOH . D 4 HOH A 95 595 168 HOH HOH . D 4 HOH A 96 596 23 HOH HOH . D 4 HOH A 97 597 73 HOH HOH . D 4 HOH A 98 598 176 HOH HOH . D 4 HOH A 99 599 150 HOH HOH . D 4 HOH A 100 600 202 HOH HOH . D 4 HOH A 101 601 164 HOH HOH . D 4 HOH A 102 602 43 HOH HOH . D 4 HOH A 103 603 295 HOH HOH . D 4 HOH A 104 604 244 HOH HOH . D 4 HOH A 105 605 269 HOH HOH . D 4 HOH A 106 606 32 HOH HOH . D 4 HOH A 107 607 119 HOH HOH . D 4 HOH A 108 608 108 HOH HOH . D 4 HOH A 109 609 74 HOH HOH . D 4 HOH A 110 610 68 HOH HOH . D 4 HOH A 111 611 97 HOH HOH . D 4 HOH A 112 612 25 HOH HOH . D 4 HOH A 113 613 31 HOH HOH . D 4 HOH A 114 614 24 HOH HOH . D 4 HOH A 115 615 236 HOH HOH . D 4 HOH A 116 616 222 HOH HOH . D 4 HOH A 117 617 293 HOH HOH . D 4 HOH A 118 618 59 HOH HOH . D 4 HOH A 119 619 212 HOH HOH . D 4 HOH A 120 620 20 HOH HOH . D 4 HOH A 121 621 249 HOH HOH . D 4 HOH A 122 622 6 HOH HOH . D 4 HOH A 123 623 96 HOH HOH . D 4 HOH A 124 624 52 HOH HOH . D 4 HOH A 125 625 315 HOH HOH . D 4 HOH A 126 626 132 HOH HOH . D 4 HOH A 127 627 16 HOH HOH . D 4 HOH A 128 628 100 HOH HOH . D 4 HOH A 129 629 37 HOH HOH . D 4 HOH A 130 630 40 HOH HOH . D 4 HOH A 131 631 287 HOH HOH . D 4 HOH A 132 632 13 HOH HOH . D 4 HOH A 133 633 154 HOH HOH . D 4 HOH A 134 634 19 HOH HOH . D 4 HOH A 135 635 34 HOH HOH . D 4 HOH A 136 636 80 HOH HOH . D 4 HOH A 137 637 99 HOH HOH . D 4 HOH A 138 638 216 HOH HOH . D 4 HOH A 139 639 92 HOH HOH . D 4 HOH A 140 640 240 HOH HOH . D 4 HOH A 141 641 134 HOH HOH . D 4 HOH A 142 642 175 HOH HOH . D 4 HOH A 143 643 141 HOH HOH . D 4 HOH A 144 644 79 HOH HOH . D 4 HOH A 145 645 88 HOH HOH . D 4 HOH A 146 646 113 HOH HOH . D 4 HOH A 147 647 259 HOH HOH . D 4 HOH A 148 648 18 HOH HOH . D 4 HOH A 149 649 75 HOH HOH . D 4 HOH A 150 650 11 HOH HOH . D 4 HOH A 151 651 235 HOH HOH . D 4 HOH A 152 652 35 HOH HOH . D 4 HOH A 153 653 228 HOH HOH . D 4 HOH A 154 654 320 HOH HOH . D 4 HOH A 155 655 116 HOH HOH . D 4 HOH A 156 656 55 HOH HOH . D 4 HOH A 157 657 56 HOH HOH . D 4 HOH A 158 658 302 HOH HOH . D 4 HOH A 159 659 160 HOH HOH . D 4 HOH A 160 660 123 HOH HOH . D 4 HOH A 161 661 283 HOH HOH . D 4 HOH A 162 662 120 HOH HOH . D 4 HOH A 163 663 169 HOH HOH . D 4 HOH A 164 664 58 HOH HOH . D 4 HOH A 165 665 49 HOH HOH . D 4 HOH A 166 666 258 HOH HOH . D 4 HOH A 167 667 277 HOH HOH . D 4 HOH A 168 668 64 HOH HOH . D 4 HOH A 169 669 10 HOH HOH . D 4 HOH A 170 670 257 HOH HOH . D 4 HOH A 171 671 77 HOH HOH . D 4 HOH A 172 672 279 HOH HOH . D 4 HOH A 173 673 323 HOH HOH . D 4 HOH A 174 674 204 HOH HOH . D 4 HOH A 175 675 281 HOH HOH . D 4 HOH A 176 676 133 HOH HOH . D 4 HOH A 177 677 156 HOH HOH . D 4 HOH A 178 678 145 HOH HOH . D 4 HOH A 179 679 26 HOH HOH . D 4 HOH A 180 680 39 HOH HOH . D 4 HOH A 181 681 213 HOH HOH . D 4 HOH A 182 682 47 HOH HOH . D 4 HOH A 183 683 105 HOH HOH . D 4 HOH A 184 684 157 HOH HOH . D 4 HOH A 185 685 163 HOH HOH . D 4 HOH A 186 686 61 HOH HOH . D 4 HOH A 187 687 101 HOH HOH . D 4 HOH A 188 688 4 HOH HOH . D 4 HOH A 189 689 308 HOH HOH . D 4 HOH A 190 690 62 HOH HOH . D 4 HOH A 191 691 127 HOH HOH . D 4 HOH A 192 692 298 HOH HOH . D 4 HOH A 193 693 146 HOH HOH . D 4 HOH A 194 694 307 HOH HOH . D 4 HOH A 195 695 286 HOH HOH . D 4 HOH A 196 696 218 HOH HOH . D 4 HOH A 197 697 232 HOH HOH . D 4 HOH A 198 698 191 HOH HOH . D 4 HOH A 199 699 1 HOH HOH . D 4 HOH A 200 700 93 HOH HOH . D 4 HOH A 201 701 122 HOH HOH . D 4 HOH A 202 702 246 HOH HOH . D 4 HOH A 203 703 140 HOH HOH . D 4 HOH A 204 704 217 HOH HOH . D 4 HOH A 205 705 155 HOH HOH . D 4 HOH A 206 706 117 HOH HOH . D 4 HOH A 207 707 193 HOH HOH . D 4 HOH A 208 708 289 HOH HOH . D 4 HOH A 209 709 327 HOH HOH . D 4 HOH A 210 710 196 HOH HOH . D 4 HOH A 211 711 90 HOH HOH . D 4 HOH A 212 712 316 HOH HOH . D 4 HOH A 213 713 296 HOH HOH . D 4 HOH A 214 714 187 HOH HOH . D 4 HOH A 215 715 253 HOH HOH . D 4 HOH A 216 716 306 HOH HOH . D 4 HOH A 217 717 151 HOH HOH . D 4 HOH A 218 718 251 HOH HOH . D 4 HOH A 219 719 238 HOH HOH . D 4 HOH A 220 720 319 HOH HOH . D 4 HOH A 221 721 288 HOH HOH . D 4 HOH A 222 722 14 HOH HOH . D 4 HOH A 223 723 230 HOH HOH . D 4 HOH A 224 724 297 HOH HOH . D 4 HOH A 225 725 274 HOH HOH . D 4 HOH A 226 726 311 HOH HOH . D 4 HOH A 227 727 294 HOH HOH . D 4 HOH A 228 728 291 HOH HOH . D 4 HOH A 229 729 33 HOH HOH . D 4 HOH A 230 730 310 HOH HOH . D 4 HOH A 231 731 118 HOH HOH . D 4 HOH A 232 732 312 HOH HOH . D 4 HOH A 233 733 130 HOH HOH . D 4 HOH A 234 734 309 HOH HOH . D 4 HOH A 235 735 121 HOH HOH . D 4 HOH A 236 736 209 HOH HOH . D 4 HOH A 237 737 284 HOH HOH . D 4 HOH A 238 738 304 HOH HOH . D 4 HOH A 239 739 142 HOH HOH . D 4 HOH A 240 740 143 HOH HOH . D 4 HOH A 241 741 326 HOH HOH . D 4 HOH A 242 742 208 HOH HOH . D 4 HOH A 243 743 245 HOH HOH . D 4 HOH A 244 744 303 HOH HOH . D 4 HOH A 245 745 53 HOH HOH . D 4 HOH A 246 746 324 HOH HOH . D 4 HOH A 247 747 138 HOH HOH . D 4 HOH A 248 748 250 HOH HOH . D 4 HOH A 249 749 201 HOH HOH . D 4 HOH A 250 750 210 HOH HOH . D 4 HOH A 251 751 229 HOH HOH . D 4 HOH A 252 752 243 HOH HOH . D 4 HOH A 253 753 197 HOH HOH . D 4 HOH A 254 754 192 HOH HOH . D 4 HOH A 255 755 206 HOH HOH . D 4 HOH A 256 756 321 HOH HOH . D 4 HOH A 257 757 241 HOH HOH . D 4 HOH A 258 758 317 HOH HOH . D 4 HOH A 259 759 87 HOH HOH . D 4 HOH A 260 760 233 HOH HOH . D 4 HOH A 261 761 159 HOH HOH . D 4 HOH A 262 762 112 HOH HOH . D 4 HOH A 263 763 111 HOH HOH . D 4 HOH A 264 764 131 HOH HOH . D 4 HOH A 265 765 84 HOH HOH . D 4 HOH A 266 766 301 HOH HOH . D 4 HOH A 267 767 239 HOH HOH . D 4 HOH A 268 768 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -27.133 -10.943 -19.008 1 17.46 ? C1 GOL 402 A 1 HETATM 2 O O1 GOL . . . C 3 -27.074 -11.39 -20.341 1 19.53 ? O1 GOL 402 A 1 HETATM 3 C C2 GOL . . . C 3 -28.418 -11.444 -18.37 1 24.12 ? C2 GOL 402 A 1 HETATM 4 O O2 GOL . . . C 3 -29.517 -10.971 -19.121 1 22.17 ? O2 GOL 402 A 1 HETATM 5 C C3 GOL . . . C 3 -28.435 -12.964 -18.339 1 21.67 ? C3 GOL 402 A 1 HETATM 6 O O3 GOL . . . C 3 -29.579 -13.402 -17.624 1 19.27 ? O3 GOL 402 A 1 HETATM 7 H H11 GOL . . . C 3 -26.274 -11.318 -18.453 1 20.95 ? H11 GOL 402 A 1 HETATM 8 H H12 GOL . . . C 3 -27.107 -9.853 -18.982 1 20.95 ? H12 GOL 402 A 1 HETATM 9 H HO1 GOL . . . C 3 -26.28 -11.015 -20.777 1 23.44 ? HO1 GOL 402 A 1 HETATM 10 H H2 GOL . . . C 3 -28.475 -11.069 -17.348 1 28.95 ? H2 GOL 402 A 1 HETATM 11 H HO2 GOL . . . C 3 -29.465 -11.324 -20.033 1 26.61 ? HO2 GOL 402 A 1 HETATM 12 H H31 GOL . . . C 3 -28.462 -13.355 -19.356 1 26 ? H31 GOL 402 A 1 HETATM 13 H H32 GOL . . . C 3 -27.532 -13.335 -17.854 1 26 ? H32 GOL 402 A 1 HETATM 14 H HO3 GOL . . . C 3 -29.612 -14.381 -17.629 1 23.12 ? HO3 GOL 402 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #