data_5TUY # _model_server_result.job_id 2Z4jbL96ohJb3X4hXnPl3A _model_server_result.datetime_utc '2024-12-01 21:28:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tuy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1502}' # _entry.id 5TUY # _exptl.entry_id 5TUY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 89.97 _cell.angle_gamma 90 _cell.entry_id 5TUY _cell.length_a 56.97 _cell.length_b 82.3 _cell.length_c 73.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TUY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 17 A CYS 937 1_555 A SG CYS 26 A CYS 946 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 B SG CYS 17 B CYS 937 1_555 B SG CYS 26 B CYS 946 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 A SG CYS 54 A CYS 974 1_555 D ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc2 A SG CYS 54 A CYS 974 1_555 E ZN ZN . A ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc3 A SG CYS 56 A CYS 976 1_555 E ZN ZN . A ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc4 A SG CYS 60 A CYS 980 1_555 C ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc5 A SG CYS 60 A CYS 980 1_555 E ZN ZN . A ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc6 A SG CYS 65 A CYS 985 1_555 E ZN ZN . A ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc7 A SG CYS 67 A CYS 987 1_555 D ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc8 A SG CYS 97 A CYS 1017 1_555 C ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc9 A SG CYS 97 A CYS 1017 1_555 D ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc10 A SG CYS 101 A CYS 1021 1_555 D ZN ZN . A ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc11 A SG CYS 103 A CYS 1023 1_555 C ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc12 A SG CYS 107 A CYS 1027 1_555 C ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc13 A SG CYS 195 A CYS 1115 1_555 F ZN ZN . A ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc14 A SG CYS 248 A CYS 1168 1_555 F ZN ZN . A ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc15 A SG CYS 250 A CYS 1170 1_555 F ZN ZN . A ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc16 A SG CYS 255 A CYS 1175 1_555 F ZN ZN . A ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc17 B SG CYS 54 B CYS 974 1_555 J ZN ZN . B ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc18 B SG CYS 54 B CYS 974 1_555 K ZN ZN . B ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc19 B SG CYS 56 B CYS 976 1_555 K ZN ZN . B ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc20 B SG CYS 60 B CYS 980 1_555 I ZN ZN . B ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc21 B SG CYS 60 B CYS 980 1_555 K ZN ZN . B ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc22 B SG CYS 65 B CYS 985 1_555 K ZN ZN . B ZN 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc23 B SG CYS 67 B CYS 987 1_555 J ZN ZN . B ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc24 B SG CYS 97 B CYS 1017 1_555 I ZN ZN . B ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc25 B SG CYS 97 B CYS 1017 1_555 J ZN ZN . B ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc26 B SG CYS 101 B CYS 1021 1_555 J ZN ZN . B ZN 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc27 B SG CYS 103 B CYS 1023 1_555 I ZN ZN . B ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc28 B SG CYS 107 B CYS 1027 1_555 I ZN ZN . B ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc29 B SG CYS 195 B CYS 1115 1_555 L ZN ZN . B ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc30 B SG CYS 248 B CYS 1168 1_555 L ZN ZN . B ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc31 B SG CYS 250 B CYS 1170 1_555 L ZN ZN . B ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc32 B SG CYS 255 B CYS 1175 1_555 L ZN ZN . B ZN 1504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TUY _atom_sites.fract_transf_matrix[1][1] 0.017553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] -0.000009 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012151 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1501 1501 ZN ZN . D 2 ZN A 1 1502 1502 ZN ZN . E 2 ZN A 1 1503 1503 ZN ZN . F 2 ZN A 1 1504 1504 ZN ZN . G 3 SAM A 1 1505 2000 SAM SAM . H 4 7L6 A 1 1506 2 7L6 DRG . I 2 ZN B 1 1501 1501 ZN ZN . J 2 ZN B 1 1502 1502 ZN ZN . K 2 ZN B 1 1503 1503 ZN ZN . L 2 ZN B 1 1504 1504 ZN ZN . M 3 SAM B 1 1505 2000 SAM SAM . N 4 7L6 B 1 1506 1 7L6 DRG . O 5 HOH A 1 1601 137 HOH HOH . O 5 HOH A 2 1602 35 HOH HOH . O 5 HOH A 3 1603 27 HOH HOH . O 5 HOH A 4 1604 11 HOH HOH . O 5 HOH A 5 1605 14 HOH HOH . O 5 HOH A 6 1606 16 HOH HOH . O 5 HOH A 7 1607 5 HOH HOH . O 5 HOH A 8 1608 70 HOH HOH . O 5 HOH A 9 1609 104 HOH HOH . O 5 HOH A 10 1610 6 HOH HOH . O 5 HOH A 11 1611 37 HOH HOH . O 5 HOH A 12 1612 112 HOH HOH . O 5 HOH A 13 1613 76 HOH HOH . O 5 HOH A 14 1614 101 HOH HOH . O 5 HOH A 15 1615 40 HOH HOH . O 5 HOH A 16 1616 79 HOH HOH . O 5 HOH A 17 1617 110 HOH HOH . O 5 HOH A 18 1618 26 HOH HOH . O 5 HOH A 19 1619 24 HOH HOH . O 5 HOH A 20 1620 115 HOH HOH . O 5 HOH A 21 1621 52 HOH HOH . O 5 HOH A 22 1622 65 HOH HOH . O 5 HOH A 23 1623 30 HOH HOH . O 5 HOH A 24 1624 57 HOH HOH . O 5 HOH A 25 1625 18 HOH HOH . O 5 HOH A 26 1626 80 HOH HOH . O 5 HOH A 27 1627 39 HOH HOH . O 5 HOH A 28 1628 95 HOH HOH . O 5 HOH A 29 1629 123 HOH HOH . O 5 HOH A 30 1630 21 HOH HOH . O 5 HOH A 31 1631 23 HOH HOH . O 5 HOH A 32 1632 34 HOH HOH . O 5 HOH A 33 1633 66 HOH HOH . O 5 HOH A 34 1634 2 HOH HOH . O 5 HOH A 35 1635 78 HOH HOH . O 5 HOH A 36 1636 108 HOH HOH . O 5 HOH A 37 1637 20 HOH HOH . O 5 HOH A 38 1638 144 HOH HOH . O 5 HOH A 39 1639 102 HOH HOH . O 5 HOH A 40 1640 77 HOH HOH . O 5 HOH A 41 1641 128 HOH HOH . O 5 HOH A 42 1642 42 HOH HOH . O 5 HOH A 43 1643 43 HOH HOH . O 5 HOH A 44 1644 62 HOH HOH . O 5 HOH A 45 1645 31 HOH HOH . O 5 HOH A 46 1646 156 HOH HOH . O 5 HOH A 47 1647 131 HOH HOH . O 5 HOH A 48 1648 75 HOH HOH . O 5 HOH A 49 1649 64 HOH HOH . O 5 HOH A 50 1650 12 HOH HOH . O 5 HOH A 51 1651 72 HOH HOH . P 5 HOH B 1 1601 8 HOH HOH . P 5 HOH B 2 1602 81 HOH HOH . P 5 HOH B 3 1603 1 HOH HOH . P 5 HOH B 4 1604 109 HOH HOH . P 5 HOH B 5 1605 10 HOH HOH . P 5 HOH B 6 1606 36 HOH HOH . P 5 HOH B 7 1607 124 HOH HOH . P 5 HOH B 8 1608 32 HOH HOH . P 5 HOH B 9 1609 4 HOH HOH . P 5 HOH B 10 1610 86 HOH HOH . P 5 HOH B 11 1611 41 HOH HOH . P 5 HOH B 12 1612 103 HOH HOH . P 5 HOH B 13 1613 51 HOH HOH . P 5 HOH B 14 1614 7 HOH HOH . P 5 HOH B 15 1615 59 HOH HOH . P 5 HOH B 16 1616 19 HOH HOH . P 5 HOH B 17 1617 17 HOH HOH . P 5 HOH B 18 1618 13 HOH HOH . P 5 HOH B 19 1619 130 HOH HOH . P 5 HOH B 20 1620 3 HOH HOH . P 5 HOH B 21 1621 88 HOH HOH . P 5 HOH B 22 1622 87 HOH HOH . P 5 HOH B 23 1623 92 HOH HOH . P 5 HOH B 24 1624 116 HOH HOH . P 5 HOH B 25 1625 96 HOH HOH . P 5 HOH B 26 1626 9 HOH HOH . P 5 HOH B 27 1627 48 HOH HOH . P 5 HOH B 28 1628 15 HOH HOH . P 5 HOH B 29 1629 33 HOH HOH . P 5 HOH B 30 1630 90 HOH HOH . P 5 HOH B 31 1631 61 HOH HOH . P 5 HOH B 32 1632 94 HOH HOH . P 5 HOH B 33 1633 85 HOH HOH . P 5 HOH B 34 1634 58 HOH HOH . P 5 HOH B 35 1635 154 HOH HOH . P 5 HOH B 36 1636 121 HOH HOH . P 5 HOH B 37 1637 25 HOH HOH . P 5 HOH B 38 1638 150 HOH HOH . P 5 HOH B 39 1639 141 HOH HOH . P 5 HOH B 40 1640 67 HOH HOH . P 5 HOH B 41 1641 56 HOH HOH . P 5 HOH B 42 1642 74 HOH HOH . P 5 HOH B 43 1643 142 HOH HOH . P 5 HOH B 44 1644 151 HOH HOH . P 5 HOH B 45 1645 155 HOH HOH . P 5 HOH B 46 1646 153 HOH HOH . P 5 HOH B 47 1647 113 HOH HOH . P 5 HOH B 48 1648 122 HOH HOH . P 5 HOH B 49 1649 152 HOH HOH . P 5 HOH B 50 1650 91 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.694 _atom_site.Cartn_y -3.309 _atom_site.Cartn_z 26.521 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #