data_5TV0 # _model_server_result.job_id AiylfwW_XVEwmyn8JyEwDw _model_server_result.datetime_utc '2024-11-13 11:11:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tv0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5TV0 # _exptl.entry_id 5TV0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TV0 _cell.length_a 82.72 _cell.length_b 82.72 _cell.length_c 88.083 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 226 n n C1 C2 GOL sing 227 n n C1 H11 GOL sing 228 n n C1 H12 GOL sing 229 n n O1 HO1 GOL sing 230 n n C2 O2 GOL sing 231 n n C2 C3 GOL sing 232 n n C2 H2 GOL sing 233 n n O2 HO2 GOL sing 234 n n C3 O3 GOL sing 235 n n C3 H31 GOL sing 236 n n C3 H32 GOL sing 237 n n O3 HO3 GOL sing 238 n n # _atom_sites.entry_id 5TV0 _atom_sites.fract_transf_matrix[1][1] 0.012089 _atom_sites.fract_transf_matrix[1][2] 0.00698 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013959 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 1 GOL GOL . C 3 EQ3 A 1 402 1 EQ3 HEQ . D 4 HOH A 1 501 82 HOH HOH . D 4 HOH A 2 502 240 HOH HOH . D 4 HOH A 3 503 208 HOH HOH . D 4 HOH A 4 504 63 HOH HOH . D 4 HOH A 5 505 177 HOH HOH . D 4 HOH A 6 506 176 HOH HOH . D 4 HOH A 7 507 123 HOH HOH . D 4 HOH A 8 508 45 HOH HOH . D 4 HOH A 9 509 52 HOH HOH . D 4 HOH A 10 510 258 HOH HOH . D 4 HOH A 11 511 233 HOH HOH . D 4 HOH A 12 512 81 HOH HOH . D 4 HOH A 13 513 117 HOH HOH . D 4 HOH A 14 514 12 HOH HOH . D 4 HOH A 15 515 182 HOH HOH . D 4 HOH A 16 516 158 HOH HOH . D 4 HOH A 17 517 141 HOH HOH . D 4 HOH A 18 518 51 HOH HOH . D 4 HOH A 19 519 62 HOH HOH . D 4 HOH A 20 520 2 HOH HOH . D 4 HOH A 21 521 34 HOH HOH . D 4 HOH A 22 522 78 HOH HOH . D 4 HOH A 23 523 235 HOH HOH . D 4 HOH A 24 524 48 HOH HOH . D 4 HOH A 25 525 42 HOH HOH . D 4 HOH A 26 526 138 HOH HOH . D 4 HOH A 27 527 175 HOH HOH . D 4 HOH A 28 528 106 HOH HOH . D 4 HOH A 29 529 77 HOH HOH . D 4 HOH A 30 530 17 HOH HOH . D 4 HOH A 31 531 30 HOH HOH . D 4 HOH A 32 532 85 HOH HOH . D 4 HOH A 33 533 70 HOH HOH . D 4 HOH A 34 534 59 HOH HOH . D 4 HOH A 35 535 32 HOH HOH . D 4 HOH A 36 536 132 HOH HOH . D 4 HOH A 37 537 125 HOH HOH . D 4 HOH A 38 538 15 HOH HOH . D 4 HOH A 39 539 166 HOH HOH . D 4 HOH A 40 540 69 HOH HOH . D 4 HOH A 41 541 7 HOH HOH . D 4 HOH A 42 542 215 HOH HOH . D 4 HOH A 43 543 108 HOH HOH . D 4 HOH A 44 544 36 HOH HOH . D 4 HOH A 45 545 252 HOH HOH . D 4 HOH A 46 546 151 HOH HOH . D 4 HOH A 47 547 20 HOH HOH . D 4 HOH A 48 548 22 HOH HOH . D 4 HOH A 49 549 116 HOH HOH . D 4 HOH A 50 550 27 HOH HOH . D 4 HOH A 51 551 87 HOH HOH . D 4 HOH A 52 552 6 HOH HOH . D 4 HOH A 53 553 157 HOH HOH . D 4 HOH A 54 554 212 HOH HOH . D 4 HOH A 55 555 66 HOH HOH . D 4 HOH A 56 556 19 HOH HOH . D 4 HOH A 57 557 149 HOH HOH . D 4 HOH A 58 558 95 HOH HOH . D 4 HOH A 59 559 101 HOH HOH . D 4 HOH A 60 560 25 HOH HOH . D 4 HOH A 61 561 13 HOH HOH . D 4 HOH A 62 562 76 HOH HOH . D 4 HOH A 63 563 49 HOH HOH . D 4 HOH A 64 564 54 HOH HOH . D 4 HOH A 65 565 80 HOH HOH . D 4 HOH A 66 566 134 HOH HOH . D 4 HOH A 67 567 18 HOH HOH . D 4 HOH A 68 568 73 HOH HOH . D 4 HOH A 69 569 11 HOH HOH . D 4 HOH A 70 570 4 HOH HOH . D 4 HOH A 71 571 128 HOH HOH . D 4 HOH A 72 572 153 HOH HOH . D 4 HOH A 73 573 9 HOH HOH . D 4 HOH A 74 574 224 HOH HOH . D 4 HOH A 75 575 46 HOH HOH . D 4 HOH A 76 576 71 HOH HOH . D 4 HOH A 77 577 31 HOH HOH . D 4 HOH A 78 578 99 HOH HOH . D 4 HOH A 79 579 40 HOH HOH . D 4 HOH A 80 580 165 HOH HOH . D 4 HOH A 81 581 23 HOH HOH . D 4 HOH A 82 582 26 HOH HOH . D 4 HOH A 83 583 41 HOH HOH . D 4 HOH A 84 584 263 HOH HOH . D 4 HOH A 85 585 60 HOH HOH . D 4 HOH A 86 586 1 HOH HOH . D 4 HOH A 87 587 184 HOH HOH . D 4 HOH A 88 588 207 HOH HOH . D 4 HOH A 89 589 129 HOH HOH . D 4 HOH A 90 590 130 HOH HOH . D 4 HOH A 91 591 100 HOH HOH . D 4 HOH A 92 592 120 HOH HOH . D 4 HOH A 93 593 161 HOH HOH . D 4 HOH A 94 594 8 HOH HOH . D 4 HOH A 95 595 194 HOH HOH . D 4 HOH A 96 596 121 HOH HOH . D 4 HOH A 97 597 243 HOH HOH . D 4 HOH A 98 598 115 HOH HOH . D 4 HOH A 99 599 110 HOH HOH . D 4 HOH A 100 600 43 HOH HOH . D 4 HOH A 101 601 136 HOH HOH . D 4 HOH A 102 602 53 HOH HOH . D 4 HOH A 103 603 35 HOH HOH . D 4 HOH A 104 604 16 HOH HOH . D 4 HOH A 105 605 179 HOH HOH . D 4 HOH A 106 606 112 HOH HOH . D 4 HOH A 107 607 21 HOH HOH . D 4 HOH A 108 608 111 HOH HOH . D 4 HOH A 109 609 119 HOH HOH . D 4 HOH A 110 610 282 HOH HOH . D 4 HOH A 111 611 286 HOH HOH . D 4 HOH A 112 612 109 HOH HOH . D 4 HOH A 113 613 64 HOH HOH . D 4 HOH A 114 614 90 HOH HOH . D 4 HOH A 115 615 191 HOH HOH . D 4 HOH A 116 616 146 HOH HOH . D 4 HOH A 117 617 58 HOH HOH . D 4 HOH A 118 618 107 HOH HOH . D 4 HOH A 119 619 14 HOH HOH . D 4 HOH A 120 620 5 HOH HOH . D 4 HOH A 121 621 86 HOH HOH . D 4 HOH A 122 622 44 HOH HOH . D 4 HOH A 123 623 50 HOH HOH . D 4 HOH A 124 624 196 HOH HOH . D 4 HOH A 125 625 103 HOH HOH . D 4 HOH A 126 626 118 HOH HOH . D 4 HOH A 127 627 57 HOH HOH . D 4 HOH A 128 628 253 HOH HOH . D 4 HOH A 129 629 144 HOH HOH . D 4 HOH A 130 630 83 HOH HOH . D 4 HOH A 131 631 105 HOH HOH . D 4 HOH A 132 632 47 HOH HOH . D 4 HOH A 133 633 24 HOH HOH . D 4 HOH A 134 634 38 HOH HOH . D 4 HOH A 135 635 152 HOH HOH . D 4 HOH A 136 636 79 HOH HOH . D 4 HOH A 137 637 126 HOH HOH . D 4 HOH A 138 638 137 HOH HOH . D 4 HOH A 139 639 91 HOH HOH . D 4 HOH A 140 640 29 HOH HOH . D 4 HOH A 141 641 124 HOH HOH . D 4 HOH A 142 642 231 HOH HOH . D 4 HOH A 143 643 232 HOH HOH . D 4 HOH A 144 644 37 HOH HOH . D 4 HOH A 145 645 268 HOH HOH . D 4 HOH A 146 646 10 HOH HOH . D 4 HOH A 147 647 55 HOH HOH . D 4 HOH A 148 648 3 HOH HOH . D 4 HOH A 149 649 271 HOH HOH . D 4 HOH A 150 650 242 HOH HOH . D 4 HOH A 151 651 273 HOH HOH . D 4 HOH A 152 652 102 HOH HOH . D 4 HOH A 153 653 206 HOH HOH . D 4 HOH A 154 654 142 HOH HOH . D 4 HOH A 155 655 114 HOH HOH . D 4 HOH A 156 656 56 HOH HOH . D 4 HOH A 157 657 98 HOH HOH . D 4 HOH A 158 658 145 HOH HOH . D 4 HOH A 159 659 150 HOH HOH . D 4 HOH A 160 660 74 HOH HOH . D 4 HOH A 161 661 104 HOH HOH . D 4 HOH A 162 662 140 HOH HOH . D 4 HOH A 163 663 28 HOH HOH . D 4 HOH A 164 664 203 HOH HOH . D 4 HOH A 165 665 280 HOH HOH . D 4 HOH A 166 666 96 HOH HOH . D 4 HOH A 167 667 72 HOH HOH . D 4 HOH A 168 668 228 HOH HOH . D 4 HOH A 169 669 190 HOH HOH . D 4 HOH A 170 670 250 HOH HOH . D 4 HOH A 171 671 160 HOH HOH . D 4 HOH A 172 672 262 HOH HOH . D 4 HOH A 173 673 154 HOH HOH . D 4 HOH A 174 674 133 HOH HOH . D 4 HOH A 175 675 211 HOH HOH . D 4 HOH A 176 676 68 HOH HOH . D 4 HOH A 177 677 92 HOH HOH . D 4 HOH A 178 678 290 HOH HOH . D 4 HOH A 179 679 178 HOH HOH . D 4 HOH A 180 680 254 HOH HOH . D 4 HOH A 181 681 65 HOH HOH . D 4 HOH A 182 682 170 HOH HOH . D 4 HOH A 183 683 174 HOH HOH . D 4 HOH A 184 684 135 HOH HOH . D 4 HOH A 185 685 139 HOH HOH . D 4 HOH A 186 686 259 HOH HOH . D 4 HOH A 187 687 201 HOH HOH . D 4 HOH A 188 688 291 HOH HOH . D 4 HOH A 189 689 277 HOH HOH . D 4 HOH A 190 690 186 HOH HOH . D 4 HOH A 191 691 122 HOH HOH . D 4 HOH A 192 692 127 HOH HOH . D 4 HOH A 193 693 219 HOH HOH . D 4 HOH A 194 694 255 HOH HOH . D 4 HOH A 195 695 131 HOH HOH . D 4 HOH A 196 696 183 HOH HOH . D 4 HOH A 197 697 197 HOH HOH . D 4 HOH A 198 698 155 HOH HOH . D 4 HOH A 199 699 264 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 -27.159 -11.068 -19.115 1 29.53 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 -26.979 -11.491 -20.451 1 30.22 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 -28.457 -11.653 -18.561 1 30.28 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 -29.525 -11.208 -19.376 1 29.14 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 -28.403 -13.173 -18.606 1 27.38 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 -29.573 -13.694 -17.994 1 28.58 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #