data_5TVI
#
_model_server_result.job_id            EoZV7UcuY6OU5vZc-zeIcA 
_model_server_result.datetime_utc      '2024-11-08 01:37:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tvi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":102}' 
#
_entry.id    5TVI 
#
_exptl.entry_id    5TVI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              228.371 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MYRISTIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5TVI 
_cell.length_a            87.48 
_cell.length_b            87.48 
_cell.length_c            49.67 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TVI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 V CYS 4 1_555 A SG CYS 51 V CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf2 A SG CYS 14 V CYS 14 1_555 A SG CYS 28 V CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
disulf ? disulf3 A SG CYS 29 V CYS 29 1_555 A SG CYS 74 V CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf4 A SG CYS 49 V CYS 49 1_555 A SG CYS 88 V CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf5 B SG CYS 4 W CYS 4 1_555 B SG CYS 51 W CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf6 B SG CYS 14 W CYS 14 1_555 B SG CYS 28 W CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf7 B SG CYS 29 W CYS 29 1_555 B SG CYS 74 W CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? 
disulf ? disulf8 B SG CYS 49 W CYS 49 1_555 B SG CYS 88 W CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
#
_chem_comp.formula           'C14 H28 O2' 
_chem_comp.formula_weight    228.371 
_chem_comp.id                MYR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MYRISTIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 MYR doub 210 n n 
C1 O2 MYR sing 211 n n 
C1 C2 MYR sing 212 n n 
O2 HO2 MYR sing 213 n n 
C2 C3 MYR sing 214 n n 
C2 H21 MYR sing 215 n n 
C2 H22 MYR sing 216 n n 
C3 C4 MYR sing 217 n n 
C3 H31 MYR sing 218 n n 
C3 H32 MYR sing 219 n n 
C4 C5 MYR sing 220 n n 
C4 H41 MYR sing 221 n n 
C4 H42 MYR sing 222 n n 
C5 C6 MYR sing 223 n n 
C5 H51 MYR sing 224 n n 
C5 H52 MYR sing 225 n n 
C6 C7 MYR sing 226 n n 
C6 H61 MYR sing 227 n n 
C6 H62 MYR sing 228 n n 
C7 C8 MYR sing 229 n n 
C7 H71 MYR sing 230 n n 
C7 H72 MYR sing 231 n n 
C8 C9 MYR sing 232 n n 
C8 H81 MYR sing 233 n n 
C8 H82 MYR sing 234 n n 
C9 C10 MYR sing 235 n n 
C9 H91 MYR sing 236 n n 
C9 H92 MYR sing 237 n n 
C10 C11 MYR sing 238 n n 
C10 H101 MYR sing 239 n n 
C10 H102 MYR sing 240 n n 
C11 C12 MYR sing 241 n n 
C11 H111 MYR sing 242 n n 
C11 H112 MYR sing 243 n n 
C12 C13 MYR sing 244 n n 
C12 H121 MYR sing 245 n n 
C12 H122 MYR sing 246 n n 
C13 C14 MYR sing 247 n n 
C13 H131 MYR sing 248 n n 
C13 H132 MYR sing 249 n n 
C14 H141 MYR sing 250 n n 
C14 H142 MYR sing 251 n n 
C14 H143 MYR sing 252 n n 
#
_atom_sites.entry_id                     5TVI 
_atom_sites.fract_transf_matrix[1][1]    0.011431 
_atom_sites.fract_transf_matrix[1][2]    0.0066 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0132 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020133 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL V 1 101 1 GOL GOL . 
D 3 MYR V 1 102 1 MYR MYR . 
E 4 O8N W 1 101 1 O8N O8N . 
F 5 HOH V 1 201 49 HOH HOH . 
F 5 HOH V 2 202 111 HOH HOH . 
F 5 HOH V 3 203 113 HOH HOH . 
F 5 HOH V 4 204 23 HOH HOH . 
F 5 HOH V 5 205 14 HOH HOH . 
F 5 HOH V 6 206 4 HOH HOH . 
F 5 HOH V 7 207 1 HOH HOH . 
F 5 HOH V 8 208 6 HOH HOH . 
F 5 HOH V 9 209 2 HOH HOH . 
F 5 HOH V 10 210 30 HOH HOH . 
F 5 HOH V 11 211 57 HOH HOH . 
F 5 HOH V 12 212 29 HOH HOH . 
F 5 HOH V 13 213 13 HOH HOH . 
F 5 HOH V 14 214 26 HOH HOH . 
F 5 HOH V 15 215 72 HOH HOH . 
F 5 HOH V 16 216 31 HOH HOH . 
F 5 HOH V 17 217 55 HOH HOH . 
F 5 HOH V 18 218 16 HOH HOH . 
F 5 HOH V 19 219 17 HOH HOH . 
F 5 HOH V 20 220 34 HOH HOH . 
F 5 HOH V 21 221 102 HOH HOH . 
F 5 HOH V 22 222 99 HOH HOH . 
F 5 HOH V 23 223 83 HOH HOH . 
F 5 HOH V 24 224 65 HOH HOH . 
F 5 HOH V 25 225 112 HOH HOH . 
F 5 HOH V 26 226 94 HOH HOH . 
F 5 HOH V 27 227 74 HOH HOH . 
G 5 HOH W 1 201 89 HOH HOH . 
G 5 HOH W 2 202 42 HOH HOH . 
G 5 HOH W 3 203 24 HOH HOH . 
G 5 HOH W 4 204 63 HOH HOH . 
G 5 HOH W 5 205 9 HOH HOH . 
G 5 HOH W 6 206 20 HOH HOH . 
G 5 HOH W 7 207 15 HOH HOH . 
G 5 HOH W 8 208 33 HOH HOH . 
G 5 HOH W 9 209 5 HOH HOH . 
G 5 HOH W 10 210 11 HOH HOH . 
G 5 HOH W 11 211 32 HOH HOH . 
G 5 HOH W 12 212 12 HOH HOH . 
G 5 HOH W 13 213 73 HOH HOH . 
G 5 HOH W 14 214 8 HOH HOH . 
G 5 HOH W 15 215 22 HOH HOH . 
G 5 HOH W 16 216 75 HOH HOH . 
G 5 HOH W 17 217 25 HOH HOH . 
G 5 HOH W 18 218 7 HOH HOH . 
G 5 HOH W 19 219 3 HOH HOH . 
G 5 HOH W 20 220 51 HOH HOH . 
G 5 HOH W 21 221 84 HOH HOH . 
G 5 HOH W 22 222 110 HOH HOH . 
G 5 HOH W 23 223 19 HOH HOH . 
G 5 HOH W 24 224 88 HOH HOH . 
G 5 HOH W 25 225 10 HOH HOH . 
G 5 HOH W 26 226 18 HOH HOH . 
G 5 HOH W 27 227 109 HOH HOH . 
G 5 HOH W 28 228 90 HOH HOH . 
G 5 HOH W 29 229 41 HOH HOH . 
G 5 HOH W 30 230 85 HOH HOH . 
G 5 HOH W 31 231 82 HOH HOH . 
G 5 HOH W 32 232 28 HOH HOH . 
G 5 HOH W 33 233 114 HOH HOH . 
G 5 HOH W 34 234 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MYR . . . D 3 103.989 46.396 -10.721 1 58.85 ? C1 MYR 102 V 1 
HETATM 2 O O1 MYR . . . D 3 105.24 46.512 -10.735 1 66.04 ? O1 MYR 102 V 1 
HETATM 3 O O2 MYR . . . D 3 103.331 46.361 -9.653 1 64.15 ? O2 MYR 102 V 1 
HETATM 4 C C2 MYR . . . D 3 103.255 46.324 -12.043 1 48.14 ? C2 MYR 102 V 1 
HETATM 5 C C3 MYR . . . D 3 102.604 45.002 -12.392 1 34.21 ? C3 MYR 102 V 1 
HETATM 6 C C4 MYR . . . D 3 101.805 45.081 -13.689 1 36.51 ? C4 MYR 102 V 1 
HETATM 7 C C5 MYR . . . D 3 100.422 45.649 -13.443 1 33.6 ? C5 MYR 102 V 1 
HETATM 8 C C6 MYR . . . D 3 99.82 46.528 -14.517 1 41.28 ? C6 MYR 102 V 1 
HETATM 9 C C7 MYR . . . D 3 98.799 47.505 -13.958 1 41.35 ? C7 MYR 102 V 1 
HETATM 10 C C8 MYR . . . D 3 99.429 48.532 -13.033 1 49.48 ? C8 MYR 102 V 1 
HETATM 11 C C9 MYR . . . D 3 98.477 49.575 -12.463 1 54.17 ? C9 MYR 102 V 1 
HETATM 12 C C10 MYR . . . D 3 98.987 50.282 -11.216 1 53.19 ? C10 MYR 102 V 1 
HETATM 13 C C11 MYR . . . D 3 100.416 49.928 -10.851 1 55.63 ? C11 MYR 102 V 1 
HETATM 14 C C12 MYR . . . D 3 100.784 50.193 -9.403 1 56.33 ? C12 MYR 102 V 1 
HETATM 15 C C13 MYR . . . D 3 101.018 48.927 -8.608 1 55.35 ? C13 MYR 102 V 1 
HETATM 16 C C14 MYR . . . D 3 102.397 48.835 -7.992 1 53.6 ? C14 MYR 102 V 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           16 
#