data_5TVJ # _model_server_result.job_id kqVNsztIWwWjWor8FpSxiQ _model_server_result.datetime_utc '2024-11-23 21:58:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tvj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5TVJ # _exptl.entry_id 5TVJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 345.39 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-fluorophenyl)-2-[2-(4-methylphenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TVJ _cell.length_a 175.106 _cell.length_b 175.106 _cell.length_c 122.94 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TVJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 122.94 5 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 122.94 6 'crystal symmetry operation' 6_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 122.94 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H18 F N2 O 1' _chem_comp.formula_weight 345.39 _chem_comp.id 7LF _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-fluorophenyl)-2-[2-(4-methylphenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 7LF sing 1 n n C20 C18 7LF doub 2 n y C20 C21 7LF sing 3 n y C18 C17 7LF sing 4 n y C21 C15 7LF doub 5 n y C17 C16 7LF doub 6 n y C15 C16 7LF sing 7 n y C15 C 7LF sing 8 n n O C 7LF doub 9 n n C C1 7LF sing 10 n n C1 N 7LF sing 11 n n C14 N 7LF sing 12 n y C14 C13 7LF doub 13 n y N C2 7LF doub 14 n y C13 N1 7LF sing 15 n y C2 C3 7LF sing 16 n n C2 C9 7LF sing 17 n y C8 C3 7LF doub 18 n y C8 C7 7LF sing 19 n y N1 C9 7LF sing 20 n y N1 C12 7LF sing 21 n y C3 C4 7LF sing 22 n y C7 C6 7LF doub 23 n y C9 C10 7LF doub 24 n y C12 C11 7LF doub 25 n y C4 C5 7LF doub 26 n y C6 C5 7LF sing 27 n y C6 F 7LF sing 28 n n C10 C11 7LF sing 29 n y C5 H1 7LF sing 30 n n C4 H2 7LF sing 31 n n C7 H3 7LF sing 32 n n C8 H4 7LF sing 33 n n C12 H5 7LF sing 34 n n C11 H6 7LF sing 35 n n C10 H7 7LF sing 36 n n C13 H8 7LF sing 37 n n C14 H9 7LF sing 38 n n C1 H10 7LF sing 39 n n C1 H11 7LF sing 40 n n C21 H12 7LF sing 41 n n C20 H13 7LF sing 42 n n C19 H14 7LF sing 43 n n C19 H15 7LF sing 44 n n C19 H16 7LF sing 45 n n C17 H17 7LF sing 46 n n C16 H18 7LF sing 47 n n # _atom_sites.entry_id 5TVJ _atom_sites.fract_transf_matrix[1][1] 0.005711 _atom_sites.fract_transf_matrix[1][2] 0.003297 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 501 500 COA COA . C 3 7LF A 1 502 505 7LF AA6 . D 4 GOL A 1 503 507 GOL GOL . E 5 CL A 1 504 2 CL CL . F 6 HOH A 1 601 483 HOH HOH . F 6 HOH A 2 602 334 HOH HOH . F 6 HOH A 3 603 206 HOH HOH . F 6 HOH A 4 604 429 HOH HOH . F 6 HOH A 5 605 307 HOH HOH . F 6 HOH A 6 606 411 HOH HOH . F 6 HOH A 7 607 512 HOH HOH . F 6 HOH A 8 608 170 HOH HOH . F 6 HOH A 9 609 290 HOH HOH . F 6 HOH A 10 610 415 HOH HOH . F 6 HOH A 11 611 414 HOH HOH . F 6 HOH A 12 612 219 HOH HOH . F 6 HOH A 13 613 68 HOH HOH . F 6 HOH A 14 614 291 HOH HOH . F 6 HOH A 15 615 279 HOH HOH . F 6 HOH A 16 616 54 HOH HOH . F 6 HOH A 17 617 86 HOH HOH . F 6 HOH A 18 618 322 HOH HOH . F 6 HOH A 19 619 417 HOH HOH . F 6 HOH A 20 620 153 HOH HOH . F 6 HOH A 21 621 296 HOH HOH . F 6 HOH A 22 622 513 HOH HOH . F 6 HOH A 23 623 467 HOH HOH . F 6 HOH A 24 624 313 HOH HOH . F 6 HOH A 25 625 324 HOH HOH . F 6 HOH A 26 626 300 HOH HOH . F 6 HOH A 27 627 293 HOH HOH . F 6 HOH A 28 628 283 HOH HOH . F 6 HOH A 29 629 39 HOH HOH . F 6 HOH A 30 630 32 HOH HOH . F 6 HOH A 31 631 284 HOH HOH . F 6 HOH A 32 632 294 HOH HOH . F 6 HOH A 33 633 302 HOH HOH . F 6 HOH A 34 634 405 HOH HOH . F 6 HOH A 35 635 408 HOH HOH . F 6 HOH A 36 636 21 HOH HOH . F 6 HOH A 37 637 5 HOH HOH . F 6 HOH A 38 638 186 HOH HOH . F 6 HOH A 39 639 453 HOH HOH . F 6 HOH A 40 640 182 HOH HOH . F 6 HOH A 41 641 35 HOH HOH . F 6 HOH A 42 642 288 HOH HOH . F 6 HOH A 43 643 168 HOH HOH . F 6 HOH A 44 644 26 HOH HOH . F 6 HOH A 45 645 476 HOH HOH . F 6 HOH A 46 646 280 HOH HOH . F 6 HOH A 47 647 347 HOH HOH . F 6 HOH A 48 648 486 HOH HOH . F 6 HOH A 49 649 20 HOH HOH . F 6 HOH A 50 650 400 HOH HOH . F 6 HOH A 51 651 52 HOH HOH . F 6 HOH A 52 652 101 HOH HOH . F 6 HOH A 53 653 180 HOH HOH . F 6 HOH A 54 654 339 HOH HOH . F 6 HOH A 55 655 163 HOH HOH . F 6 HOH A 56 656 134 HOH HOH . F 6 HOH A 57 657 183 HOH HOH . F 6 HOH A 58 658 171 HOH HOH . F 6 HOH A 59 659 276 HOH HOH . F 6 HOH A 60 660 185 HOH HOH . F 6 HOH A 61 661 166 HOH HOH . F 6 HOH A 62 662 34 HOH HOH . F 6 HOH A 63 663 56 HOH HOH . F 6 HOH A 64 664 100 HOH HOH . F 6 HOH A 65 665 7 HOH HOH . F 6 HOH A 66 666 482 HOH HOH . F 6 HOH A 67 667 451 HOH HOH . F 6 HOH A 68 668 403 HOH HOH . F 6 HOH A 69 669 488 HOH HOH . F 6 HOH A 70 670 369 HOH HOH . F 6 HOH A 71 671 132 HOH HOH . F 6 HOH A 72 672 423 HOH HOH . F 6 HOH A 73 673 93 HOH HOH . F 6 HOH A 74 674 120 HOH HOH . F 6 HOH A 75 675 151 HOH HOH . F 6 HOH A 76 676 303 HOH HOH . F 6 HOH A 77 677 287 HOH HOH . F 6 HOH A 78 678 404 HOH HOH . F 6 HOH A 79 679 71 HOH HOH . F 6 HOH A 80 680 261 HOH HOH . F 6 HOH A 81 681 46 HOH HOH . F 6 HOH A 82 682 456 HOH HOH . F 6 HOH A 83 683 11 HOH HOH . F 6 HOH A 84 684 510 HOH HOH . F 6 HOH A 85 685 278 HOH HOH . F 6 HOH A 86 686 157 HOH HOH . F 6 HOH A 87 687 78 HOH HOH . F 6 HOH A 88 688 289 HOH HOH . F 6 HOH A 89 689 511 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N 7LF . . . C 3 20.694 -9.875 38.426 1 54.67 ? N 7LF 502 A 1 HETATM 2 C C 7LF . . . C 3 20.182 -11.196 36.383 1 49.23 ? C 7LF 502 A 1 HETATM 3 O O 7LF . . . C 3 19.097 -10.662 36.369 1 51.05 ? O 7LF 502 A 1 HETATM 4 F F 7LF . . . C 3 20.157 -15.254 41.87 1 87.01 ? F 7LF 502 A 1 HETATM 5 C C6 7LF . . . C 3 20.064 -14.023 41.313 1 73.99 ? C6 7LF 502 A 1 HETATM 6 C C5 7LF . . . C 3 20.826 -12.962 41.812 1 73.83 ? C5 7LF 502 A 1 HETATM 7 C C4 7LF . . . C 3 20.734 -11.692 41.234 1 71.67 ? C4 7LF 502 A 1 HETATM 8 C C7 7LF . . . C 3 19.21 -13.809 40.228 1 70.83 ? C7 7LF 502 A 1 HETATM 9 C C8 7LF . . . C 3 19.116 -12.542 39.652 1 66.13 ? C8 7LF 502 A 1 HETATM 10 C C3 7LF . . . C 3 19.882 -11.482 40.151 1 64.8 ? C3 7LF 502 A 1 HETATM 11 C C2 7LF . . . C 3 19.723 -10.159 39.491 1 60.43 ? C2 7LF 502 A 1 HETATM 12 C C9 7LF . . . C 3 19.537 -8.977 40.355 1 60.65 ? C9 7LF 502 A 1 HETATM 13 N N1 7LF . . . C 3 20.013 -7.753 40.101 1 58.93 ? N1 7LF 502 A 1 HETATM 14 C C12 7LF . . . C 3 19.546 -6.923 41.044 1 59.38 ? C12 7LF 502 A 1 HETATM 15 C C11 7LF . . . C 3 18.713 -7.563 41.933 1 61.18 ? C11 7LF 502 A 1 HETATM 16 C C10 7LF . . . C 3 18.68 -8.864 41.495 1 60.95 ? C10 7LF 502 A 1 HETATM 17 C C13 7LF . . . C 3 20.831 -7.567 39.07 1 57.82 ? C13 7LF 502 A 1 HETATM 18 C C14 7LF . . . C 3 21.152 -8.634 38.234 1 58.49 ? C14 7LF 502 A 1 HETATM 19 C C1 7LF . . . C 3 21.139 -10.896 37.479 1 52.37 ? C1 7LF 502 A 1 HETATM 20 C C15 7LF . . . C 3 20.609 -12.159 35.323 1 48.29 ? C15 7LF 502 A 1 HETATM 21 C C21 7LF . . . C 3 19.736 -12.43 34.278 1 48.85 ? C21 7LF 502 A 1 HETATM 22 C C20 7LF . . . C 3 20.099 -13.316 33.274 1 48.22 ? C20 7LF 502 A 1 HETATM 23 C C18 7LF . . . C 3 21.337 -13.934 33.304 1 49.52 ? C18 7LF 502 A 1 HETATM 24 C C19 7LF . . . C 3 21.699 -14.886 32.197 1 51.42 ? C19 7LF 502 A 1 HETATM 25 C C17 7LF . . . C 3 22.222 -13.671 34.347 1 49.52 ? C17 7LF 502 A 1 HETATM 26 C C16 7LF . . . C 3 21.859 -12.785 35.358 1 48.82 ? C16 7LF 502 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #