data_5TWA # _model_server_result.job_id 4UDTZ-sbjPHJ63BOAO4Qvw _model_server_result.datetime_utc '2024-11-22 18:15:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5twa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":101}' # _entry.id 5TWA # _exptl.entry_id 5TWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 20 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.34 _cell.angle_gamma 90 _cell.entry_id 5TWA _cell.length_a 68.311 _cell.length_b 51.594 _cell.length_c 107.802 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,AA,BA 1 1 C,D,P,Q,R,S,T,U,V,W,X,Y,Z,CA,DA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 Y N N ? 3 Z N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 127 n n C1 C2 EDO sing 128 n n C1 H11 EDO sing 129 n n C1 H12 EDO sing 130 n n O1 HO1 EDO sing 131 n n C2 O2 EDO sing 132 n n C2 H21 EDO sing 133 n n C2 H22 EDO sing 134 n n O2 HO2 EDO sing 135 n n # _atom_sites.entry_id 5TWA _atom_sites.fract_transf_matrix[1][1] 0.014639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001627 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EDO A 1 301 4 EDO EDO . F 3 EDO A 1 302 12 EDO EDO . G 3 EDO A 1 303 15 EDO EDO . H 3 EDO A 1 304 16 EDO EDO . I 3 EDO A 1 305 17 EDO EDO . J 3 EDO A 1 306 18 EDO EDO . K 3 EDO A 1 307 22 EDO EDO . L 3 EDO A 1 308 24 EDO EDO . M 4 B3P A 1 309 1 B3P BTP . N 3 EDO D 1 101 7 EDO EDO . O 3 EDO D 1 102 19 EDO EDO . P 3 EDO B 1 301 9 EDO EDO . Q 3 EDO B 1 302 10 EDO EDO . R 3 EDO B 1 303 13 EDO EDO . S 3 EDO B 1 304 14 EDO EDO . T 3 EDO B 1 305 20 EDO EDO . U 3 EDO B 1 306 21 EDO EDO . V 3 EDO B 1 307 23 EDO EDO . W 3 EDO B 1 308 26 EDO EDO . X 4 B3P B 1 309 2 B3P BTP . Y 3 EDO C 1 101 11 EDO EDO . Z 3 EDO C 1 102 25 EDO EDO . AA 5 HOH A 1 401 298 HOH HOH . AA 5 HOH A 2 402 169 HOH HOH . AA 5 HOH A 3 403 86 HOH HOH . AA 5 HOH A 4 404 27 HOH HOH . AA 5 HOH A 5 405 141 HOH HOH . AA 5 HOH A 6 406 293 HOH HOH . AA 5 HOH A 7 407 280 HOH HOH . AA 5 HOH A 8 408 139 HOH HOH . AA 5 HOH A 9 409 134 HOH HOH . AA 5 HOH A 10 410 165 HOH HOH . AA 5 HOH A 11 411 284 HOH HOH . AA 5 HOH A 12 412 168 HOH HOH . AA 5 HOH A 13 413 138 HOH HOH . AA 5 HOH A 14 414 143 HOH HOH . AA 5 HOH A 15 415 56 HOH HOH . AA 5 HOH A 16 416 111 HOH HOH . AA 5 HOH A 17 417 7 HOH HOH . AA 5 HOH A 18 418 8 HOH HOH . AA 5 HOH A 19 419 35 HOH HOH . AA 5 HOH A 20 420 12 HOH HOH . AA 5 HOH A 21 421 105 HOH HOH . AA 5 HOH A 22 422 54 HOH HOH . AA 5 HOH A 23 423 144 HOH HOH . AA 5 HOH A 24 424 23 HOH HOH . AA 5 HOH A 25 425 1 HOH HOH . AA 5 HOH A 26 426 109 HOH HOH . AA 5 HOH A 27 427 132 HOH HOH . AA 5 HOH A 28 428 73 HOH HOH . AA 5 HOH A 29 429 142 HOH HOH . AA 5 HOH A 30 430 6 HOH HOH . AA 5 HOH A 31 431 15 HOH HOH . AA 5 HOH A 32 432 71 HOH HOH . AA 5 HOH A 33 433 164 HOH HOH . AA 5 HOH A 34 434 151 HOH HOH . AA 5 HOH A 35 435 106 HOH HOH . AA 5 HOH A 36 436 99 HOH HOH . AA 5 HOH A 37 437 159 HOH HOH . AA 5 HOH A 38 438 152 HOH HOH . AA 5 HOH A 39 439 38 HOH HOH . AA 5 HOH A 40 440 288 HOH HOH . AA 5 HOH A 41 441 52 HOH HOH . AA 5 HOH A 42 442 96 HOH HOH . AA 5 HOH A 43 443 93 HOH HOH . AA 5 HOH A 44 444 10 HOH HOH . AA 5 HOH A 45 445 37 HOH HOH . AA 5 HOH A 46 446 3 HOH HOH . AA 5 HOH A 47 447 292 HOH HOH . AA 5 HOH A 48 448 24 HOH HOH . AA 5 HOH A 49 449 202 HOH HOH . AA 5 HOH A 50 450 17 HOH HOH . AA 5 HOH A 51 451 135 HOH HOH . AA 5 HOH A 52 452 279 HOH HOH . AA 5 HOH A 53 453 81 HOH HOH . AA 5 HOH A 54 454 275 HOH HOH . AA 5 HOH A 55 455 156 HOH HOH . AA 5 HOH A 56 456 153 HOH HOH . AA 5 HOH A 57 457 283 HOH HOH . AA 5 HOH A 58 458 4 HOH HOH . AA 5 HOH A 59 459 129 HOH HOH . AA 5 HOH A 60 460 80 HOH HOH . AA 5 HOH A 61 461 300 HOH HOH . AA 5 HOH A 62 462 254 HOH HOH . AA 5 HOH A 63 463 70 HOH HOH . AA 5 HOH A 64 464 34 HOH HOH . AA 5 HOH A 65 465 92 HOH HOH . AA 5 HOH A 66 466 166 HOH HOH . AA 5 HOH A 67 467 160 HOH HOH . AA 5 HOH A 68 468 262 HOH HOH . AA 5 HOH A 69 469 155 HOH HOH . AA 5 HOH A 70 470 72 HOH HOH . AA 5 HOH A 71 471 259 HOH HOH . AA 5 HOH A 72 472 145 HOH HOH . AA 5 HOH A 73 473 154 HOH HOH . AA 5 HOH A 74 474 249 HOH HOH . AA 5 HOH A 75 475 250 HOH HOH . AA 5 HOH A 76 476 130 HOH HOH . AA 5 HOH A 77 477 110 HOH HOH . AA 5 HOH A 78 478 285 HOH HOH . AA 5 HOH A 79 479 157 HOH HOH . AA 5 HOH A 80 480 261 HOH HOH . AA 5 HOH A 81 481 75 HOH HOH . AA 5 HOH A 82 482 55 HOH HOH . AA 5 HOH A 83 483 263 HOH HOH . BA 5 HOH D 1 201 18 HOH HOH . BA 5 HOH D 2 202 203 HOH HOH . BA 5 HOH D 3 203 68 HOH HOH . BA 5 HOH D 4 204 11 HOH HOH . BA 5 HOH D 5 205 172 HOH HOH . BA 5 HOH D 6 206 57 HOH HOH . BA 5 HOH D 7 207 36 HOH HOH . BA 5 HOH D 8 208 299 HOH HOH . BA 5 HOH D 9 209 108 HOH HOH . BA 5 HOH D 10 210 289 HOH HOH . BA 5 HOH D 11 211 251 HOH HOH . BA 5 HOH D 12 212 74 HOH HOH . BA 5 HOH D 13 213 252 HOH HOH . CA 5 HOH B 1 401 287 HOH HOH . CA 5 HOH B 2 402 303 HOH HOH . CA 5 HOH B 3 403 196 HOH HOH . CA 5 HOH B 4 404 267 HOH HOH . CA 5 HOH B 5 405 192 HOH HOH . CA 5 HOH B 6 406 230 HOH HOH . CA 5 HOH B 7 407 274 HOH HOH . CA 5 HOH B 8 408 295 HOH HOH . CA 5 HOH B 9 409 173 HOH HOH . CA 5 HOH B 10 410 282 HOH HOH . CA 5 HOH B 11 411 177 HOH HOH . CA 5 HOH B 12 412 210 HOH HOH . CA 5 HOH B 13 413 187 HOH HOH . CA 5 HOH B 14 414 207 HOH HOH . CA 5 HOH B 15 415 291 HOH HOH . CA 5 HOH B 16 416 276 HOH HOH . CA 5 HOH B 17 417 232 HOH HOH . CA 5 HOH B 18 418 272 HOH HOH . CA 5 HOH B 19 419 248 HOH HOH . CA 5 HOH B 20 420 225 HOH HOH . CA 5 HOH B 21 421 243 HOH HOH . CA 5 HOH B 22 422 184 HOH HOH . CA 5 HOH B 23 423 224 HOH HOH . CA 5 HOH B 24 424 185 HOH HOH . CA 5 HOH B 25 425 245 HOH HOH . CA 5 HOH B 26 426 246 HOH HOH . CA 5 HOH B 27 427 179 HOH HOH . CA 5 HOH B 28 428 240 HOH HOH . CA 5 HOH B 29 429 226 HOH HOH . CA 5 HOH B 30 430 215 HOH HOH . CA 5 HOH B 31 431 176 HOH HOH . CA 5 HOH B 32 432 228 HOH HOH . CA 5 HOH B 33 433 227 HOH HOH . CA 5 HOH B 34 434 229 HOH HOH . CA 5 HOH B 35 435 237 HOH HOH . CA 5 HOH B 36 436 235 HOH HOH . CA 5 HOH B 37 437 221 HOH HOH . CA 5 HOH B 38 438 211 HOH HOH . CA 5 HOH B 39 439 297 HOH HOH . CA 5 HOH B 40 440 231 HOH HOH . CA 5 HOH B 41 441 266 HOH HOH . CA 5 HOH B 42 442 239 HOH HOH . CA 5 HOH B 43 443 233 HOH HOH . CA 5 HOH B 44 444 244 HOH HOH . CA 5 HOH B 45 445 181 HOH HOH . CA 5 HOH B 46 446 218 HOH HOH . CA 5 HOH B 47 447 191 HOH HOH . CA 5 HOH B 48 448 241 HOH HOH . CA 5 HOH B 49 449 174 HOH HOH . CA 5 HOH B 50 450 277 HOH HOH . CA 5 HOH B 51 451 178 HOH HOH . CA 5 HOH B 52 452 238 HOH HOH . CA 5 HOH B 53 453 281 HOH HOH . CA 5 HOH B 54 454 197 HOH HOH . CA 5 HOH B 55 455 253 HOH HOH . CA 5 HOH B 56 456 236 HOH HOH . CA 5 HOH B 57 457 301 HOH HOH . CA 5 HOH B 58 458 296 HOH HOH . CA 5 HOH B 59 459 212 HOH HOH . CA 5 HOH B 60 460 189 HOH HOH . CA 5 HOH B 61 461 290 HOH HOH . CA 5 HOH B 62 462 247 HOH HOH . CA 5 HOH B 63 463 180 HOH HOH . CA 5 HOH B 64 464 209 HOH HOH . CA 5 HOH B 65 465 208 HOH HOH . CA 5 HOH B 66 466 214 HOH HOH . CA 5 HOH B 67 467 302 HOH HOH . CA 5 HOH B 68 468 273 HOH HOH . CA 5 HOH B 69 469 182 HOH HOH . DA 5 HOH C 1 201 270 HOH HOH . DA 5 HOH C 2 202 223 HOH HOH . DA 5 HOH C 3 203 278 HOH HOH . DA 5 HOH C 4 204 222 HOH HOH . DA 5 HOH C 5 205 213 HOH HOH . DA 5 HOH C 6 206 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . Y 3 7.697 -23.138 -17.711 1 39.79 ? C1 EDO 101 C 1 HETATM 2 O O1 EDO . . . Y 3 9.084 -23.401 -17.454 1 39.75 ? O1 EDO 101 C 1 HETATM 3 C C2 EDO . . . Y 3 6.872 -24.362 -17.34 1 38.33 ? C2 EDO 101 C 1 HETATM 4 O O2 EDO . . . Y 3 5.681 -23.948 -16.661 1 38.6 ? O2 EDO 101 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #