data_5TWO # _model_server_result.job_id kmZVd4VwB62Mfv4dHIfmoA _model_server_result.datetime_utc '2025-03-05 18:24:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5two # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5TWO # _exptl.entry_id 5TWO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.853 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-benzyl-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TWO _cell.length_a 56.893 _cell.length_b 88.504 _cell.length_c 122.163 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TWO _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H18 Cl F N2 O' _chem_comp.formula_weight 392.853 _chem_comp.id 7MV _chem_comp.mon_nstd_flag . _chem_comp.name N-benzyl-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C15 7MV sing 1 n n F C23 7MV sing 2 n n C15 C23 7MV doub 3 n y C15 C8 7MV sing 4 n y C23 C21 7MV sing 5 n y C21 C20 7MV doub 6 n y C8 C22 7MV doub 7 n y C22 C20 7MV sing 8 n y C20 C19 7MV sing 9 n n C19 N2 7MV sing 10 n n C18 N2 7MV sing 11 n y C18 C17 7MV doub 12 n y N2 C14 7MV sing 13 n y C17 C13 7MV sing 14 n y C14 C13 7MV doub 15 n y C14 C16 7MV sing 16 n y C13 C12 7MV sing 17 n y C16 C11 7MV doub 18 n y C12 C10 7MV doub 19 n y C11 C10 7MV sing 20 n y C10 C9 7MV sing 21 n n C5 C6 7MV doub 22 n y C5 C3 7MV sing 23 n y C6 C7 7MV sing 24 n y C3 C1 7MV doub 25 n y C7 C2 7MV doub 26 n y N1 C9 7MV sing 27 n n N1 C4 7MV sing 28 n n C9 O 7MV doub 29 n n C1 C2 7MV sing 30 n y C1 C4 7MV sing 31 n n C4 H1 7MV sing 32 n n C4 H2 7MV sing 33 n n C5 H3 7MV sing 34 n n C6 H4 7MV sing 35 n n C3 H5 7MV sing 36 n n C2 H6 7MV sing 37 n n C19 H7 7MV sing 38 n n C19 H8 7MV sing 39 n n C18 H9 7MV sing 40 n n C21 H10 7MV sing 41 n n C22 H11 7MV sing 42 n n C17 H12 7MV sing 43 n n C16 H13 7MV sing 44 n n C7 H14 7MV sing 45 n n C8 H15 7MV sing 46 n n C11 H16 7MV sing 47 n n C12 H17 7MV sing 48 n n N1 H18 7MV sing 49 n n # _atom_sites.entry_id 5TWO _atom_sites.fract_transf_matrix[1][1] 0.017577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008186 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 7MV A 1 501 100 7MV V51 . D 4 HOH A 1 601 81 HOH HOH . D 4 HOH A 2 602 115 HOH HOH . D 4 HOH A 3 603 114 HOH HOH . D 4 HOH A 4 604 124 HOH HOH . D 4 HOH A 5 605 64 HOH HOH . D 4 HOH A 6 606 47 HOH HOH . D 4 HOH A 7 607 53 HOH HOH . D 4 HOH A 8 608 91 HOH HOH . D 4 HOH A 9 609 46 HOH HOH . D 4 HOH A 10 610 54 HOH HOH . D 4 HOH A 11 611 5 HOH HOH . D 4 HOH A 12 612 8 HOH HOH . D 4 HOH A 13 613 92 HOH HOH . D 4 HOH A 14 614 10 HOH HOH . D 4 HOH A 15 615 1 HOH HOH . D 4 HOH A 16 616 59 HOH HOH . D 4 HOH A 17 617 98 HOH HOH . D 4 HOH A 18 618 65 HOH HOH . D 4 HOH A 19 619 14 HOH HOH . D 4 HOH A 20 620 3 HOH HOH . D 4 HOH A 21 621 39 HOH HOH . D 4 HOH A 22 622 15 HOH HOH . D 4 HOH A 23 623 9 HOH HOH . D 4 HOH A 24 624 19 HOH HOH . D 4 HOH A 25 625 63 HOH HOH . D 4 HOH A 26 626 93 HOH HOH . D 4 HOH A 27 627 80 HOH HOH . D 4 HOH A 28 628 23 HOH HOH . D 4 HOH A 29 629 55 HOH HOH . D 4 HOH A 30 630 17 HOH HOH . D 4 HOH A 31 631 31 HOH HOH . D 4 HOH A 32 632 4 HOH HOH . D 4 HOH A 33 633 22 HOH HOH . D 4 HOH A 34 634 106 HOH HOH . D 4 HOH A 35 635 7 HOH HOH . D 4 HOH A 36 636 11 HOH HOH . D 4 HOH A 37 637 21 HOH HOH . D 4 HOH A 38 638 25 HOH HOH . D 4 HOH A 39 639 24 HOH HOH . D 4 HOH A 40 640 40 HOH HOH . D 4 HOH A 41 641 85 HOH HOH . D 4 HOH A 42 642 78 HOH HOH . D 4 HOH A 43 643 32 HOH HOH . D 4 HOH A 44 644 43 HOH HOH . D 4 HOH A 45 645 95 HOH HOH . D 4 HOH A 46 646 60 HOH HOH . D 4 HOH A 47 647 20 HOH HOH . D 4 HOH A 48 648 27 HOH HOH . D 4 HOH A 49 649 90 HOH HOH . D 4 HOH A 50 650 75 HOH HOH . D 4 HOH A 51 651 18 HOH HOH . D 4 HOH A 52 652 13 HOH HOH . D 4 HOH A 53 653 33 HOH HOH . D 4 HOH A 54 654 94 HOH HOH . D 4 HOH A 55 655 84 HOH HOH . D 4 HOH A 56 656 100 HOH HOH . D 4 HOH A 57 657 6 HOH HOH . D 4 HOH A 58 658 86 HOH HOH . D 4 HOH A 59 659 88 HOH HOH . D 4 HOH A 60 660 58 HOH HOH . D 4 HOH A 61 661 105 HOH HOH . D 4 HOH A 62 662 28 HOH HOH . D 4 HOH A 63 663 12 HOH HOH . D 4 HOH A 64 664 122 HOH HOH . D 4 HOH A 65 665 67 HOH HOH . D 4 HOH A 66 666 45 HOH HOH . D 4 HOH A 67 667 44 HOH HOH . D 4 HOH A 68 668 79 HOH HOH . D 4 HOH A 69 669 104 HOH HOH . D 4 HOH A 70 670 2 HOH HOH . D 4 HOH A 71 671 97 HOH HOH . D 4 HOH A 72 672 70 HOH HOH . D 4 HOH A 73 673 107 HOH HOH . D 4 HOH A 74 674 38 HOH HOH . D 4 HOH A 75 675 26 HOH HOH . D 4 HOH A 76 676 41 HOH HOH . D 4 HOH A 77 677 118 HOH HOH . D 4 HOH A 78 678 29 HOH HOH . D 4 HOH A 79 679 30 HOH HOH . D 4 HOH A 80 680 68 HOH HOH . D 4 HOH A 81 681 57 HOH HOH . D 4 HOH A 82 682 119 HOH HOH . D 4 HOH A 83 683 34 HOH HOH . D 4 HOH A 84 684 66 HOH HOH . D 4 HOH A 85 685 102 HOH HOH . D 4 HOH A 86 686 73 HOH HOH . D 4 HOH A 87 687 87 HOH HOH . D 4 HOH A 88 688 56 HOH HOH . D 4 HOH A 89 689 42 HOH HOH . D 4 HOH A 90 690 62 HOH HOH . D 4 HOH A 91 691 61 HOH HOH . D 4 HOH A 92 692 117 HOH HOH . D 4 HOH A 93 693 99 HOH HOH . D 4 HOH A 94 694 121 HOH HOH . D 4 HOH A 95 695 112 HOH HOH . D 4 HOH A 96 696 69 HOH HOH . D 4 HOH A 97 697 123 HOH HOH . D 4 HOH A 98 698 51 HOH HOH . D 4 HOH A 99 699 111 HOH HOH . D 4 HOH A 100 700 96 HOH HOH . D 4 HOH A 101 701 16 HOH HOH . D 4 HOH A 102 702 74 HOH HOH . D 4 HOH A 103 703 36 HOH HOH . D 4 HOH A 104 704 108 HOH HOH . D 4 HOH A 105 705 101 HOH HOH . D 4 HOH A 106 706 48 HOH HOH . D 4 HOH A 107 707 76 HOH HOH . D 4 HOH A 108 708 120 HOH HOH . D 4 HOH A 109 709 83 HOH HOH . D 4 HOH A 110 710 35 HOH HOH . D 4 HOH A 111 711 82 HOH HOH . D 4 HOH A 112 712 71 HOH HOH . D 4 HOH A 113 713 116 HOH HOH . D 4 HOH A 114 714 77 HOH HOH . D 4 HOH A 115 715 109 HOH HOH . D 4 HOH A 116 716 113 HOH HOH . D 4 HOH A 117 717 37 HOH HOH . D 4 HOH A 118 718 50 HOH HOH . D 4 HOH A 119 719 49 HOH HOH . D 4 HOH A 120 720 110 HOH HOH . D 4 HOH A 121 721 103 HOH HOH . D 4 HOH A 122 722 89 HOH HOH . D 4 HOH A 123 723 72 HOH HOH . E 4 HOH B 1 201 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 7MV . . . C 3 -21.315 -20.453 14.366 1 35.56 ? C4 7MV 501 A 1 HETATM 2 C C5 7MV . . . C 3 -21.482 -23.764 12.466 1 42.96 ? C5 7MV 501 A 1 HETATM 3 C C6 7MV . . . C 3 -20.182 -24.234 12.641 1 47.97 ? C6 7MV 501 A 1 HETATM 4 C C1 7MV . . . C 3 -20.929 -21.784 13.749 1 44.49 ? C1 7MV 501 A 1 HETATM 5 C C3 7MV . . . C 3 -21.859 -22.549 13.011 1 41.1 ? C3 7MV 501 A 1 HETATM 6 C C2 7MV . . . C 3 -19.631 -22.267 13.926 1 44.09 ? C2 7MV 501 A 1 HETATM 7 C C19 7MV . . . C 3 -27.717 -17.958 8.529 1 28.13 ? C19 7MV 501 A 1 HETATM 8 C C18 7MV . . . C 3 -25.687 -16.682 8.683 1 33.3 ? C18 7MV 501 A 1 HETATM 9 C C20 7MV . . . C 3 -27.595 -19.152 7.643 1 37.09 ? C20 7MV 501 A 1 HETATM 10 C C23 7MV . . . C 3 -26.369 -20.412 5.992 1 34.86 ? C23 7MV 501 A 1 HETATM 11 C C21 7MV . . . C 3 -26.468 -19.304 6.81 1 32.14 ? C21 7MV 501 A 1 HETATM 12 C C15 7MV . . . C 3 -27.396 -21.385 5.981 1 38.35 ? C15 7MV 501 A 1 HETATM 13 C C22 7MV . . . C 3 -28.626 -20.131 7.623 1 41.61 ? C22 7MV 501 A 1 HETATM 14 C C17 7MV . . . C 3 -24.541 -16.633 9.493 1 30.67 ? C17 7MV 501 A 1 HETATM 15 C C16 7MV . . . C 3 -26.403 -19.351 11.025 1 30.87 ? C16 7MV 501 A 1 HETATM 16 C C7 7MV . . . C 3 -19.252 -23.476 13.381 1 48.66 ? C7 7MV 501 A 1 HETATM 17 C C8 7MV . . . C 3 -28.528 -21.233 6.806 1 35.14 ? C8 7MV 501 A 1 HETATM 18 C C9 7MV . . . C 3 -23.535 -19.707 13.582 1 29.89 ? C9 7MV 501 A 1 HETATM 19 C C10 7MV . . . C 3 -24.406 -19.201 12.372 1 28.18 ? C10 7MV 501 A 1 HETATM 20 C C11 7MV . . . C 3 -25.635 -19.802 12.094 1 31.28 ? C11 7MV 501 A 1 HETATM 21 C C12 7MV . . . C 3 -23.93 -18.126 11.575 1 28.51 ? C12 7MV 501 A 1 HETATM 22 C C13 7MV . . . C 3 -24.711 -17.672 10.487 1 35.03 ? C13 7MV 501 A 1 HETATM 23 C C14 7MV . . . C 3 -25.924 -18.262 10.208 1 29.14 ? C14 7MV 501 A 1 HETATM 24 CL CL 7MV . . . C 3 -27.223 -22.804 4.899 1 47.41 ? CL 7MV 501 A 1 HETATM 25 F F 7MV . . . C 3 -25.332 -20.576 5.214 1 41.35 ? F 7MV 501 A 1 HETATM 26 O O 7MV . . . C 3 -24.097 -20.158 14.556 1 30.34 ? O 7MV 501 A 1 HETATM 27 N N1 7MV . . . C 3 -22.102 -19.643 13.517 1 31.38 ? N1 7MV 501 A 1 HETATM 28 N N2 7MV . . . C 3 -26.476 -17.637 9.115 1 31.78 ? N2 7MV 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #