data_5TX6 # _model_server_result.job_id hdyYf0uV2MCahaUoVjltWg _model_server_result.datetime_utc '2024-12-22 17:40:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 5TX6 # _exptl.entry_id 5TX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TX6 _cell.length_a 81.744 _cell.length_b 81.744 _cell.length_c 80.926 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,D,F 1 1 A,E 2 1 C,G 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 B CYS 7 1_555 A SG CYS 17 B CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 16 B CYS 15 1_555 A SG CYS 59 B CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf3 A SG CYS 45 B CYS 44 1_555 A SG CYS 90 B CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 A SG CYS 49 B CYS 48 1_555 A SG CYS 92 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 B SG CYS 8 A CYS 7 1_555 B SG CYS 17 A CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 16 A CYS 15 1_555 B SG CYS 59 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 45 A CYS 44 1_555 B SG CYS 90 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 B SG CYS 49 A CYS 48 1_555 B SG CYS 92 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf9 C SG CYS 8 C CYS 7 1_555 C SG CYS 17 C CYS 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 C SG CYS 16 C CYS 15 1_555 C SG CYS 59 C CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 C SG CYS 45 C CYS 44 1_555 C SG CYS 90 C CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OE1 GLU 80 B GLU 99 1_555 D CA CA . A CA 201 5_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A O GLN 81 B GLN 100 1_555 D CA CA . A CA 201 5_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc3 B OE1 GLU 80 A GLU 99 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc4 B OE2 GLU 80 A GLU 99 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc5 B O GLN 81 A GLN 100 1_555 D CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TX6 _atom_sites.fract_transf_matrix[1][1] 0.012233 _atom_sites.fract_transf_matrix[1][2] 0.007063 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014126 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012357 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CA A 1 201 1 CA CA . E 3 HOH B 1 201 14 HOH HOH . E 3 HOH B 2 202 10 HOH HOH . E 3 HOH B 3 203 45 HOH HOH . E 3 HOH B 4 204 9 HOH HOH . E 3 HOH B 5 205 2 HOH HOH . E 3 HOH B 6 206 81 HOH HOH . E 3 HOH B 7 207 78 HOH HOH . E 3 HOH B 8 208 69 HOH HOH . E 3 HOH B 9 209 13 HOH HOH . E 3 HOH B 10 210 21 HOH HOH . E 3 HOH B 11 211 8 HOH HOH . E 3 HOH B 12 212 12 HOH HOH . E 3 HOH B 13 213 17 HOH HOH . E 3 HOH B 14 214 24 HOH HOH . E 3 HOH B 15 215 60 HOH HOH . E 3 HOH B 16 216 68 HOH HOH . E 3 HOH B 17 217 16 HOH HOH . E 3 HOH B 18 218 27 HOH HOH . E 3 HOH B 19 219 31 HOH HOH . E 3 HOH B 20 220 75 HOH HOH . E 3 HOH B 21 221 71 HOH HOH . E 3 HOH B 22 222 89 HOH HOH . E 3 HOH B 23 223 28 HOH HOH . E 3 HOH B 24 224 88 HOH HOH . E 3 HOH B 25 225 23 HOH HOH . E 3 HOH B 26 226 83 HOH HOH . E 3 HOH B 27 227 6 HOH HOH . E 3 HOH B 28 228 97 HOH HOH . E 3 HOH B 29 229 74 HOH HOH . E 3 HOH B 30 230 96 HOH HOH . E 3 HOH B 31 231 86 HOH HOH . E 3 HOH B 32 232 49 HOH HOH . F 3 HOH A 1 301 32 HOH HOH . F 3 HOH A 2 302 99 HOH HOH . F 3 HOH A 3 303 57 HOH HOH . F 3 HOH A 4 304 25 HOH HOH . F 3 HOH A 5 305 1 HOH HOH . F 3 HOH A 6 306 56 HOH HOH . F 3 HOH A 7 307 4 HOH HOH . F 3 HOH A 8 308 7 HOH HOH . F 3 HOH A 9 309 79 HOH HOH . F 3 HOH A 10 310 92 HOH HOH . F 3 HOH A 11 311 40 HOH HOH . F 3 HOH A 12 312 90 HOH HOH . F 3 HOH A 13 313 5 HOH HOH . F 3 HOH A 14 314 15 HOH HOH . F 3 HOH A 15 315 19 HOH HOH . F 3 HOH A 16 316 91 HOH HOH . F 3 HOH A 17 317 20 HOH HOH . F 3 HOH A 18 318 51 HOH HOH . F 3 HOH A 19 319 84 HOH HOH . F 3 HOH A 20 320 53 HOH HOH . G 3 HOH C 1 201 18 HOH HOH . G 3 HOH C 2 202 94 HOH HOH . G 3 HOH C 3 203 11 HOH HOH . G 3 HOH C 4 204 34 HOH HOH . G 3 HOH C 5 205 66 HOH HOH . G 3 HOH C 6 206 3 HOH HOH . G 3 HOH C 7 207 93 HOH HOH . G 3 HOH C 8 208 33 HOH HOH . G 3 HOH C 9 209 67 HOH HOH . G 3 HOH C 10 210 73 HOH HOH . G 3 HOH C 11 211 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 61.759 _atom_site.Cartn_y -46.998 _atom_site.Cartn_z -10.187 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #