data_5TY0 # _model_server_result.job_id BxZmguaIPv20lPgDI5bHwg _model_server_result.datetime_utc '2024-12-26 21:59:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ty0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5TY0 # _exptl.entry_id 5TY0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TY0 _cell.length_a 53.399 _cell.length_b 89.853 _cell.length_c 117.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TY0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 104 A LEU 101 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc2 A O LEU 107 A LEU 104 1_555 B NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc3 B NA NA . A NA 501 1_555 D O HOH . A HOH 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc4 B NA NA . A NA 501 1_555 D O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.835 ? metalc ? metalc5 B NA NA . A NA 501 1_555 D O HOH . A HOH 790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 5TY0 _atom_sites.fract_transf_matrix[1][1] 0.018727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011129 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 501 1 NA NA . C 3 BGC A 1 502 2 BGC BGC . D 4 HOH A 1 601 66 HOH HOH . D 4 HOH A 2 602 164 HOH HOH . D 4 HOH A 3 603 42 HOH HOH . D 4 HOH A 4 604 144 HOH HOH . D 4 HOH A 5 605 108 HOH HOH . D 4 HOH A 6 606 52 HOH HOH . D 4 HOH A 7 607 16 HOH HOH . D 4 HOH A 8 608 32 HOH HOH . D 4 HOH A 9 609 7 HOH HOH . D 4 HOH A 10 610 218 HOH HOH . D 4 HOH A 11 611 49 HOH HOH . D 4 HOH A 12 612 209 HOH HOH . D 4 HOH A 13 613 96 HOH HOH . D 4 HOH A 14 614 118 HOH HOH . D 4 HOH A 15 615 213 HOH HOH . D 4 HOH A 16 616 30 HOH HOH . D 4 HOH A 17 617 92 HOH HOH . D 4 HOH A 18 618 93 HOH HOH . D 4 HOH A 19 619 204 HOH HOH . D 4 HOH A 20 620 217 HOH HOH . D 4 HOH A 21 621 145 HOH HOH . D 4 HOH A 22 622 41 HOH HOH . D 4 HOH A 23 623 100 HOH HOH . D 4 HOH A 24 624 138 HOH HOH . D 4 HOH A 25 625 35 HOH HOH . D 4 HOH A 26 626 78 HOH HOH . D 4 HOH A 27 627 139 HOH HOH . D 4 HOH A 28 628 203 HOH HOH . D 4 HOH A 29 629 97 HOH HOH . D 4 HOH A 30 630 34 HOH HOH . D 4 HOH A 31 631 15 HOH HOH . D 4 HOH A 32 632 196 HOH HOH . D 4 HOH A 33 633 27 HOH HOH . D 4 HOH A 34 634 11 HOH HOH . D 4 HOH A 35 635 199 HOH HOH . D 4 HOH A 36 636 219 HOH HOH . D 4 HOH A 37 637 143 HOH HOH . D 4 HOH A 38 638 47 HOH HOH . D 4 HOH A 39 639 86 HOH HOH . D 4 HOH A 40 640 176 HOH HOH . D 4 HOH A 41 641 165 HOH HOH . D 4 HOH A 42 642 125 HOH HOH . D 4 HOH A 43 643 3 HOH HOH . D 4 HOH A 44 644 63 HOH HOH . D 4 HOH A 45 645 90 HOH HOH . D 4 HOH A 46 646 148 HOH HOH . D 4 HOH A 47 647 4 HOH HOH . D 4 HOH A 48 648 48 HOH HOH . D 4 HOH A 49 649 44 HOH HOH . D 4 HOH A 50 650 57 HOH HOH . D 4 HOH A 51 651 6 HOH HOH . D 4 HOH A 52 652 31 HOH HOH . D 4 HOH A 53 653 98 HOH HOH . D 4 HOH A 54 654 150 HOH HOH . D 4 HOH A 55 655 79 HOH HOH . D 4 HOH A 56 656 58 HOH HOH . D 4 HOH A 57 657 104 HOH HOH . D 4 HOH A 58 658 36 HOH HOH . D 4 HOH A 59 659 39 HOH HOH . D 4 HOH A 60 660 20 HOH HOH . D 4 HOH A 61 661 161 HOH HOH . D 4 HOH A 62 662 38 HOH HOH . D 4 HOH A 63 663 179 HOH HOH . D 4 HOH A 64 664 152 HOH HOH . D 4 HOH A 65 665 89 HOH HOH . D 4 HOH A 66 666 43 HOH HOH . D 4 HOH A 67 667 5 HOH HOH . D 4 HOH A 68 668 163 HOH HOH . D 4 HOH A 69 669 62 HOH HOH . D 4 HOH A 70 670 174 HOH HOH . D 4 HOH A 71 671 130 HOH HOH . D 4 HOH A 72 672 53 HOH HOH . D 4 HOH A 73 673 65 HOH HOH . D 4 HOH A 74 674 84 HOH HOH . D 4 HOH A 75 675 10 HOH HOH . D 4 HOH A 76 676 46 HOH HOH . D 4 HOH A 77 677 68 HOH HOH . D 4 HOH A 78 678 71 HOH HOH . D 4 HOH A 79 679 175 HOH HOH . D 4 HOH A 80 680 210 HOH HOH . D 4 HOH A 81 681 112 HOH HOH . D 4 HOH A 82 682 82 HOH HOH . D 4 HOH A 83 683 216 HOH HOH . D 4 HOH A 84 684 212 HOH HOH . D 4 HOH A 85 685 37 HOH HOH . D 4 HOH A 86 686 170 HOH HOH . D 4 HOH A 87 687 173 HOH HOH . D 4 HOH A 88 688 28 HOH HOH . D 4 HOH A 89 689 168 HOH HOH . D 4 HOH A 90 690 67 HOH HOH . D 4 HOH A 91 691 115 HOH HOH . D 4 HOH A 92 692 25 HOH HOH . D 4 HOH A 93 693 87 HOH HOH . D 4 HOH A 94 694 94 HOH HOH . D 4 HOH A 95 695 77 HOH HOH . D 4 HOH A 96 696 24 HOH HOH . D 4 HOH A 97 697 107 HOH HOH . D 4 HOH A 98 698 18 HOH HOH . D 4 HOH A 99 699 29 HOH HOH . D 4 HOH A 100 700 192 HOH HOH . D 4 HOH A 101 701 153 HOH HOH . D 4 HOH A 102 702 126 HOH HOH . D 4 HOH A 103 703 120 HOH HOH . D 4 HOH A 104 704 19 HOH HOH . D 4 HOH A 105 705 12 HOH HOH . D 4 HOH A 106 706 184 HOH HOH . D 4 HOH A 107 707 76 HOH HOH . D 4 HOH A 108 708 22 HOH HOH . D 4 HOH A 109 709 9 HOH HOH . D 4 HOH A 110 710 45 HOH HOH . D 4 HOH A 111 711 111 HOH HOH . D 4 HOH A 112 712 13 HOH HOH . D 4 HOH A 113 713 191 HOH HOH . D 4 HOH A 114 714 110 HOH HOH . D 4 HOH A 115 715 124 HOH HOH . D 4 HOH A 116 716 64 HOH HOH . D 4 HOH A 117 717 61 HOH HOH . D 4 HOH A 118 718 72 HOH HOH . D 4 HOH A 119 719 50 HOH HOH . D 4 HOH A 120 720 157 HOH HOH . D 4 HOH A 121 721 88 HOH HOH . D 4 HOH A 122 722 214 HOH HOH . D 4 HOH A 123 723 151 HOH HOH . D 4 HOH A 124 724 162 HOH HOH . D 4 HOH A 125 725 119 HOH HOH . D 4 HOH A 126 726 56 HOH HOH . D 4 HOH A 127 727 128 HOH HOH . D 4 HOH A 128 728 127 HOH HOH . D 4 HOH A 129 729 101 HOH HOH . D 4 HOH A 130 730 85 HOH HOH . D 4 HOH A 131 731 14 HOH HOH . D 4 HOH A 132 732 169 HOH HOH . D 4 HOH A 133 733 177 HOH HOH . D 4 HOH A 134 734 51 HOH HOH . D 4 HOH A 135 735 183 HOH HOH . D 4 HOH A 136 736 26 HOH HOH . D 4 HOH A 137 737 60 HOH HOH . D 4 HOH A 138 738 99 HOH HOH . D 4 HOH A 139 739 156 HOH HOH . D 4 HOH A 140 740 95 HOH HOH . D 4 HOH A 141 741 197 HOH HOH . D 4 HOH A 142 742 106 HOH HOH . D 4 HOH A 143 743 21 HOH HOH . D 4 HOH A 144 744 190 HOH HOH . D 4 HOH A 145 745 55 HOH HOH . D 4 HOH A 146 746 123 HOH HOH . D 4 HOH A 147 747 109 HOH HOH . D 4 HOH A 148 748 59 HOH HOH . D 4 HOH A 149 749 102 HOH HOH . D 4 HOH A 150 750 198 HOH HOH . D 4 HOH A 151 751 133 HOH HOH . D 4 HOH A 152 752 114 HOH HOH . D 4 HOH A 153 753 54 HOH HOH . D 4 HOH A 154 754 105 HOH HOH . D 4 HOH A 155 755 116 HOH HOH . D 4 HOH A 156 756 8 HOH HOH . D 4 HOH A 157 757 73 HOH HOH . D 4 HOH A 158 758 166 HOH HOH . D 4 HOH A 159 759 140 HOH HOH . D 4 HOH A 160 760 75 HOH HOH . D 4 HOH A 161 761 131 HOH HOH . D 4 HOH A 162 762 146 HOH HOH . D 4 HOH A 163 763 70 HOH HOH . D 4 HOH A 164 764 135 HOH HOH . D 4 HOH A 165 765 69 HOH HOH . D 4 HOH A 166 766 171 HOH HOH . D 4 HOH A 167 767 134 HOH HOH . D 4 HOH A 168 768 129 HOH HOH . D 4 HOH A 169 769 23 HOH HOH . D 4 HOH A 170 770 193 HOH HOH . D 4 HOH A 171 771 180 HOH HOH . D 4 HOH A 172 772 194 HOH HOH . D 4 HOH A 173 773 158 HOH HOH . D 4 HOH A 174 774 172 HOH HOH . D 4 HOH A 175 775 40 HOH HOH . D 4 HOH A 176 776 142 HOH HOH . D 4 HOH A 177 777 117 HOH HOH . D 4 HOH A 178 778 83 HOH HOH . D 4 HOH A 179 779 80 HOH HOH . D 4 HOH A 180 780 132 HOH HOH . D 4 HOH A 181 781 113 HOH HOH . D 4 HOH A 182 782 187 HOH HOH . D 4 HOH A 183 783 17 HOH HOH . D 4 HOH A 184 784 202 HOH HOH . D 4 HOH A 185 785 207 HOH HOH . D 4 HOH A 186 786 211 HOH HOH . D 4 HOH A 187 787 159 HOH HOH . D 4 HOH A 188 788 74 HOH HOH . D 4 HOH A 189 789 103 HOH HOH . D 4 HOH A 190 790 147 HOH HOH . D 4 HOH A 191 791 206 HOH HOH . D 4 HOH A 192 792 160 HOH HOH . D 4 HOH A 193 793 181 HOH HOH . D 4 HOH A 194 794 178 HOH HOH . D 4 HOH A 195 795 205 HOH HOH . D 4 HOH A 196 796 208 HOH HOH . D 4 HOH A 197 797 121 HOH HOH . D 4 HOH A 198 798 155 HOH HOH . D 4 HOH A 199 799 195 HOH HOH . D 4 HOH A 200 800 91 HOH HOH . D 4 HOH A 201 801 185 HOH HOH . D 4 HOH A 202 802 154 HOH HOH . D 4 HOH A 203 803 81 HOH HOH . D 4 HOH A 204 804 220 HOH HOH . D 4 HOH A 205 805 201 HOH HOH . D 4 HOH A 206 806 122 HOH HOH . D 4 HOH A 207 807 33 HOH HOH . D 4 HOH A 208 808 141 HOH HOH . D 4 HOH A 209 809 200 HOH HOH . D 4 HOH A 210 810 189 HOH HOH . D 4 HOH A 211 811 188 HOH HOH . D 4 HOH A 212 812 186 HOH HOH . D 4 HOH A 213 813 215 HOH HOH . D 4 HOH A 214 814 137 HOH HOH . D 4 HOH A 215 815 167 HOH HOH . D 4 HOH A 216 816 149 HOH HOH . D 4 HOH A 217 817 136 HOH HOH . D 4 HOH A 218 818 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . C 3 59.774 60.786 43.896 1 68.83 ? C2 BGC 502 A 1 HETATM 2 C C3 BGC . . . C 3 60.091 61.069 42.427 1 72.55 ? C3 BGC 502 A 1 HETATM 3 C C4 BGC . . . C 3 61.156 60.112 41.901 1 74.03 ? C4 BGC 502 A 1 HETATM 4 C C5 BGC . . . C 3 60.811 58.674 42.26 1 71.09 ? C5 BGC 502 A 1 HETATM 5 C C6 BGC . . . C 3 61.937 57.74 41.883 1 73.23 ? C6 BGC 502 A 1 HETATM 6 C C1 BGC . . . C 3 59.441 59.3 44.079 1 72.62 ? C1 BGC 502 A 1 HETATM 7 O O1 BGC . . . C 3 59.127 58.955 45.44 1 63.38 ? O1 BGC 502 A 1 HETATM 8 O O2 BGC . . . C 3 58.681 61.61 44.312 1 60.84 ? O2 BGC 502 A 1 HETATM 9 O O3 BGC . . . C 3 60.555 62.416 42.277 1 75.39 ? O3 BGC 502 A 1 HETATM 10 O O4 BGC . . . C 3 61.268 60.212 40.474 1 78.49 ? O4 BGC 502 A 1 HETATM 11 O O5 BGC . . . C 3 60.563 58.53 43.659 1 69.04 ? O5 BGC 502 A 1 HETATM 12 O O6 BGC . . . C 3 63.135 58.066 42.596 1 76.03 ? O6 BGC 502 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 12 #