data_5TYQ # _model_server_result.job_id A8OSc6LoxdHXdnU8xPN5MA _model_server_result.datetime_utc '2024-12-01 09:39:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tyq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5TYQ # _exptl.entry_id 5TYQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TYQ _cell.length_a 66.692 _cell.length_b 66.922 _cell.length_c 68.849 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TYQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 118 A GLU 98 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc2 A OE2 GLU 118 A GLU 98 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc3 A OD1 ASP 226 A ASP 206 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc4 A OD2 ASP 226 A ASP 206 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc5 C MG MG . A MG 402 1_555 D O HOH . A HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc6 C MG MG . A MG 402 1_555 D O HOH . A HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TYQ _atom_sites.fract_transf_matrix[1][1] 0.014994 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014943 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH A 1 401 1 SAH SAM . C 3 MG A 1 402 1 MG MG . D 4 HOH A 1 501 143 HOH HOH . D 4 HOH A 2 502 142 HOH HOH . D 4 HOH A 3 503 111 HOH HOH . D 4 HOH A 4 504 104 HOH HOH . D 4 HOH A 5 505 116 HOH HOH . D 4 HOH A 6 506 83 HOH HOH . D 4 HOH A 7 507 97 HOH HOH . D 4 HOH A 8 508 57 HOH HOH . D 4 HOH A 9 509 130 HOH HOH . D 4 HOH A 10 510 68 HOH HOH . D 4 HOH A 11 511 69 HOH HOH . D 4 HOH A 12 512 30 HOH HOH . D 4 HOH A 13 513 129 HOH HOH . D 4 HOH A 14 514 125 HOH HOH . D 4 HOH A 15 515 124 HOH HOH . D 4 HOH A 16 516 64 HOH HOH . D 4 HOH A 17 517 23 HOH HOH . D 4 HOH A 18 518 82 HOH HOH . D 4 HOH A 19 519 84 HOH HOH . D 4 HOH A 20 520 93 HOH HOH . D 4 HOH A 21 521 19 HOH HOH . D 4 HOH A 22 522 60 HOH HOH . D 4 HOH A 23 523 100 HOH HOH . D 4 HOH A 24 524 41 HOH HOH . D 4 HOH A 25 525 33 HOH HOH . D 4 HOH A 26 526 102 HOH HOH . D 4 HOH A 27 527 3 HOH HOH . D 4 HOH A 28 528 90 HOH HOH . D 4 HOH A 29 529 134 HOH HOH . D 4 HOH A 30 530 118 HOH HOH . D 4 HOH A 31 531 113 HOH HOH . D 4 HOH A 32 532 8 HOH HOH . D 4 HOH A 33 533 37 HOH HOH . D 4 HOH A 34 534 11 HOH HOH . D 4 HOH A 35 535 12 HOH HOH . D 4 HOH A 36 536 39 HOH HOH . D 4 HOH A 37 537 133 HOH HOH . D 4 HOH A 38 538 4 HOH HOH . D 4 HOH A 39 539 65 HOH HOH . D 4 HOH A 40 540 29 HOH HOH . D 4 HOH A 41 541 76 HOH HOH . D 4 HOH A 42 542 25 HOH HOH . D 4 HOH A 43 543 26 HOH HOH . D 4 HOH A 44 544 49 HOH HOH . D 4 HOH A 45 545 14 HOH HOH . D 4 HOH A 46 546 48 HOH HOH . D 4 HOH A 47 547 7 HOH HOH . D 4 HOH A 48 548 13 HOH HOH . D 4 HOH A 49 549 18 HOH HOH . D 4 HOH A 50 550 43 HOH HOH . D 4 HOH A 51 551 105 HOH HOH . D 4 HOH A 52 552 17 HOH HOH . D 4 HOH A 53 553 34 HOH HOH . D 4 HOH A 54 554 75 HOH HOH . D 4 HOH A 55 555 132 HOH HOH . D 4 HOH A 56 556 52 HOH HOH . D 4 HOH A 57 557 115 HOH HOH . D 4 HOH A 58 558 139 HOH HOH . D 4 HOH A 59 559 15 HOH HOH . D 4 HOH A 60 560 108 HOH HOH . D 4 HOH A 61 561 35 HOH HOH . D 4 HOH A 62 562 119 HOH HOH . D 4 HOH A 63 563 85 HOH HOH . D 4 HOH A 64 564 70 HOH HOH . D 4 HOH A 65 565 120 HOH HOH . D 4 HOH A 66 566 27 HOH HOH . D 4 HOH A 67 567 131 HOH HOH . D 4 HOH A 68 568 136 HOH HOH . D 4 HOH A 69 569 112 HOH HOH . D 4 HOH A 70 570 47 HOH HOH . D 4 HOH A 71 571 89 HOH HOH . D 4 HOH A 72 572 141 HOH HOH . D 4 HOH A 73 573 92 HOH HOH . D 4 HOH A 74 574 88 HOH HOH . D 4 HOH A 75 575 20 HOH HOH . D 4 HOH A 76 576 61 HOH HOH . D 4 HOH A 77 577 2 HOH HOH . D 4 HOH A 78 578 67 HOH HOH . D 4 HOH A 79 579 91 HOH HOH . D 4 HOH A 80 580 121 HOH HOH . D 4 HOH A 81 581 6 HOH HOH . D 4 HOH A 82 582 55 HOH HOH . D 4 HOH A 83 583 99 HOH HOH . D 4 HOH A 84 584 54 HOH HOH . D 4 HOH A 85 585 44 HOH HOH . D 4 HOH A 86 586 135 HOH HOH . D 4 HOH A 87 587 138 HOH HOH . D 4 HOH A 88 588 137 HOH HOH . D 4 HOH A 89 589 51 HOH HOH . D 4 HOH A 90 590 122 HOH HOH . D 4 HOH A 91 591 50 HOH HOH . D 4 HOH A 92 592 63 HOH HOH . D 4 HOH A 93 593 79 HOH HOH . D 4 HOH A 94 594 80 HOH HOH . D 4 HOH A 95 595 40 HOH HOH . D 4 HOH A 96 596 106 HOH HOH . D 4 HOH A 97 597 66 HOH HOH . D 4 HOH A 98 598 117 HOH HOH . D 4 HOH A 99 599 123 HOH HOH . D 4 HOH A 100 600 114 HOH HOH . D 4 HOH A 101 601 46 HOH HOH . D 4 HOH A 102 602 98 HOH HOH . D 4 HOH A 103 603 36 HOH HOH . D 4 HOH A 104 604 140 HOH HOH . D 4 HOH A 105 605 28 HOH HOH . D 4 HOH A 106 606 53 HOH HOH . D 4 HOH A 107 607 56 HOH HOH . D 4 HOH A 108 608 110 HOH HOH . D 4 HOH A 109 609 62 HOH HOH . D 4 HOH A 110 610 86 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 4.192 _atom_site.Cartn_y -9.855 _atom_site.Cartn_z 7.03 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #