data_5TZ6 # _model_server_result.job_id 73ameON0Xa8C2mgamdKUjg _model_server_result.datetime_utc '2024-12-21 13:09:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tz6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1301}' # _entry.id 5TZ6 # _exptl.entry_id 5TZ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 158.195 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2E,5R)-5-hydroxy-2-methylhept-2-enoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TZ6 _cell.length_a 47.55 _cell.length_b 70.584 _cell.length_c 176.018 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TZ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H14 O3' _chem_comp.formula_weight 158.195 _chem_comp.id 7OD _chem_comp.mon_nstd_flag . _chem_comp.name '(2E,5R)-5-hydroxy-2-methylhept-2-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAJ CAG 7OD sing 1 n n CAG CAF 7OD sing 2 n n CAF OAH 7OD sing 3 n n CAF CAE 7OD sing 4 n n CAE CAD 7OD sing 5 n n CAD CAC 7OD doub 6 e n CAC CAK 7OD sing 7 n n CAC CAA 7OD sing 8 n n OAB CAA 7OD doub 9 n n CAA OAI 7OD sing 10 n n OAI H1 7OD sing 11 n n CAK HAM 7OD sing 12 n n CAK HAN 7OD sing 13 n n CAK HAO 7OD sing 14 n n CAD HAD 7OD sing 15 n n CAE HAF 7OD sing 16 n n CAE HAE 7OD sing 17 n n CAF HAG 7OD sing 18 n n OAH HAP 7OD sing 19 n n CAG HAH 7OD sing 20 n n CAG HAI 7OD sing 21 n n CAJ HAK 7OD sing 22 n n CAJ HAL 7OD sing 23 n n CAJ HAJ 7OD sing 24 n n # _atom_sites.entry_id 5TZ6 _atom_sites.fract_transf_matrix[1][1] 0.02103 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005681 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7OD A 1 1301 1 7OD WFK . D 3 HOH A 1 1401 36 HOH HOH . D 3 HOH A 2 1402 23 HOH HOH . D 3 HOH A 3 1403 46 HOH HOH . D 3 HOH A 4 1404 3 HOH HOH . D 3 HOH A 5 1405 4 HOH HOH . D 3 HOH A 6 1406 31 HOH HOH . D 3 HOH A 7 1407 39 HOH HOH . D 3 HOH A 8 1408 25 HOH HOH . D 3 HOH A 9 1409 37 HOH HOH . D 3 HOH A 10 1410 40 HOH HOH . D 3 HOH A 11 1411 42 HOH HOH . D 3 HOH A 12 1412 5 HOH HOH . D 3 HOH A 13 1413 18 HOH HOH . D 3 HOH A 14 1414 26 HOH HOH . D 3 HOH A 15 1415 11 HOH HOH . D 3 HOH A 16 1416 9 HOH HOH . D 3 HOH A 17 1417 1 HOH HOH . D 3 HOH A 18 1418 34 HOH HOH . D 3 HOH A 19 1419 12 HOH HOH . D 3 HOH A 20 1420 32 HOH HOH . D 3 HOH A 21 1421 8 HOH HOH . D 3 HOH A 22 1422 29 HOH HOH . D 3 HOH A 23 1423 10 HOH HOH . D 3 HOH A 24 1424 27 HOH HOH . D 3 HOH A 25 1425 2 HOH HOH . D 3 HOH A 26 1426 35 HOH HOH . D 3 HOH A 27 1427 45 HOH HOH . D 3 HOH A 28 1428 22 HOH HOH . D 3 HOH A 29 1429 6 HOH HOH . D 3 HOH A 30 1430 15 HOH HOH . E 3 HOH B 1 1301 41 HOH HOH . E 3 HOH B 2 1302 28 HOH HOH . E 3 HOH B 3 1303 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAB 7OD . . . C 2 -21.458 -10.153 2.951 1 97.06 ? OAB 7OD 1301 A 1 HETATM 2 C CAA 7OD . . . C 2 -20.31 -9.823 3.312 1 99.15 ? CAA 7OD 1301 A 1 HETATM 3 O OAI 7OD . . . C 2 -19.683 -10.541 4.124 1 102.31 ? OAI 7OD 1301 A 1 HETATM 4 C CAC 7OD . . . C 2 -19.671 -8.544 2.759 1 98.78 ? CAC 7OD 1301 A 1 HETATM 5 C CAK 7OD . . . C 2 -18.257 -8.144 3.21 1 98.97 ? CAK 7OD 1301 A 1 HETATM 6 C CAD 7OD . . . C 2 -20.438 -7.661 1.76 1 99.76 ? CAD 7OD 1301 A 1 HETATM 7 C CAE 7OD . . . C 2 -19.754 -6.389 1.233 1 101.78 ? CAE 7OD 1301 A 1 HETATM 8 C CAF 7OD . . . C 2 -20.504 -5.621 0.117 1 103.88 ? CAF 7OD 1301 A 1 HETATM 9 O OAH 7OD . . . C 2 -21.094 -4.445 0.679 1 97.22 ? OAH 7OD 1301 A 1 HETATM 10 C CAG 7OD . . . C 2 -21.602 -6.435 -0.578 1 103.39 ? CAG 7OD 1301 A 1 HETATM 11 C CAJ 7OD . . . C 2 -21.979 -5.715 -1.875 1 104.23 ? CAJ 7OD 1301 A 1 HETATM 12 H HAM 7OD . . . C 2 -18.163 -7.058 3.189 1 118.76 ? HAM 7OD 1301 A 1 HETATM 13 H HAN 7OD . . . C 2 -17.523 -8.585 2.536 1 118.76 ? HAN 7OD 1301 A 1 HETATM 14 H HAO 7OD . . . C 2 -18.084 -8.504 4.223 1 118.76 ? HAO 7OD 1301 A 1 HETATM 15 H HAD 7OD . . . C 2 -21.443 -7.932 1.433 1 119.71 ? HAD 7OD 1301 A 1 HETATM 16 H HAF 7OD . . . C 2 -19.585 -5.706 2.063 1 122.13 ? HAF 7OD 1301 A 1 HETATM 17 H HAE 7OD . . . C 2 -18.787 -6.685 0.832 1 122.13 ? HAE 7OD 1301 A 1 HETATM 18 H HAG 7OD . . . C 2 -19.771 -5.313 -0.628 1 124.65 ? HAG 7OD 1301 A 1 HETATM 19 H HAP 7OD . . . C 2 -20.382 -3.885 1.103 1 116.66 ? HAP 7OD 1301 A 1 HETATM 20 H HAH 7OD . . . C 2 -21.217 -7.425 -0.822 1 124.07 ? HAH 7OD 1301 A 1 HETATM 21 H HAI 7OD . . . C 2 -22.47 -6.528 0.074 1 124.07 ? HAI 7OD 1301 A 1 HETATM 22 H HAK 7OD . . . C 2 -21.099 -5.631 -2.514 1 125.08 ? HAK 7OD 1301 A 1 HETATM 23 H HAL 7OD . . . C 2 -22.354 -4.718 -1.642 1 125.08 ? HAL 7OD 1301 A 1 HETATM 24 H HAJ 7OD . . . C 2 -22.752 -6.282 -2.394 1 125.08 ? HAJ 7OD 1301 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #