data_5TZT
#
_model_server_result.job_id            MLsfeUuMnxQCu7a_2tPyag 
_model_server_result.datetime_utc      '2024-12-24 12:27:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tzt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    5TZT 
#
_exptl.entry_id    5TZT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.05 
_cell.angle_gamma         90 
_cell.entry_id            5TZT 
_cell.length_a            74.569 
_cell.length_b            60.974 
_cell.length_c            124.133 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TZT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? trimeric 3 author_defined_assembly 1 
? trimeric 3 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,G,H,M,N,O,P,T 1 1 
C,D,E,I,J,K,L,Q,R,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 B CYS 23 1_555 A SG CYS 93 B CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 A SG CYS 139 B CYS 139 1_555 A SG CYS 199 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 B SG CYS 22 A CYS 22 1_555 B SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 B SG CYS 144 A CYS 144 1_555 B SG CYS 200 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf5 C SG CYS 23 L CYS 23 1_555 C SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf6 C SG CYS 139 L CYS 139 1_555 C SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 D SG CYS 22 H CYS 22 1_555 D SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf8 D SG CYS 144 H CYS 144 1_555 D SG CYS 200 H CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf9 E SG CYS 23 C CYS 23 1_555 E SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf10 F SG CYS 23 D CYS 23 1_555 F SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 B C PCA 1 A PCA 1 1_555 B N VAL 2 A VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 D C PCA 1 H PCA 1 1_555 D N VAL 2 H VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 E C PCA 1 C PCA 1 1_555 E N LEU 2 C LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 E ND2 ASN 93 C ASN 93 1_555 L C1 NAG . C NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale5 F C PCA 1 D PCA 1 1_555 F N LEU 2 D LEU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 F ND2 ASN 5 D ASN 5 1_555 M C1 NAG . D NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? 
covale ? covale7 F ND2 ASN 16 D ASN 16 1_555 N C1 NAG . D NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5TZT 
_atom_sites.fract_transf_matrix[1][1]    0.01341 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000012 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0164 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008056 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 GOL B 1 301 3 GOL GOL . 
H 4 GOL A 1 301 4 GOL GOL . 
I 4 GOL L 1 301 5 GOL GOL . 
J 4 GOL H 1 301 1 GOL GOL . 
K 4 GOL H 1 302 2 GOL GOL . 
L 5 NAG C 1 201 293 NAG NAG . 
M 5 NAG D 1 201 205 NAG NAG . 
N 5 NAG D 1 202 216 NAG NAG . 
O 6 HOH B 1 401 42 HOH HOH . 
O 6 HOH B 2 402 22 HOH HOH . 
O 6 HOH B 3 403 77 HOH HOH . 
O 6 HOH B 4 404 57 HOH HOH . 
O 6 HOH B 5 405 8 HOH HOH . 
O 6 HOH B 6 406 10 HOH HOH . 
O 6 HOH B 7 407 43 HOH HOH . 
O 6 HOH B 8 408 107 HOH HOH . 
O 6 HOH B 9 409 75 HOH HOH . 
O 6 HOH B 10 410 106 HOH HOH . 
O 6 HOH B 11 411 48 HOH HOH . 
O 6 HOH B 12 412 61 HOH HOH . 
O 6 HOH B 13 413 17 HOH HOH . 
O 6 HOH B 14 414 56 HOH HOH . 
O 6 HOH B 15 415 88 HOH HOH . 
O 6 HOH B 16 416 76 HOH HOH . 
O 6 HOH B 17 417 89 HOH HOH . 
O 6 HOH B 18 418 2 HOH HOH . 
O 6 HOH B 19 419 24 HOH HOH . 
O 6 HOH B 20 420 3 HOH HOH . 
O 6 HOH B 21 421 74 HOH HOH . 
O 6 HOH B 22 422 41 HOH HOH . 
O 6 HOH B 23 423 90 HOH HOH . 
O 6 HOH B 24 424 46 HOH HOH . 
O 6 HOH B 25 425 118 HOH HOH . 
O 6 HOH B 26 426 78 HOH HOH . 
O 6 HOH B 27 427 33 HOH HOH . 
P 6 HOH A 1 401 26 HOH HOH . 
P 6 HOH A 2 402 19 HOH HOH . 
P 6 HOH A 3 403 31 HOH HOH . 
P 6 HOH A 4 404 49 HOH HOH . 
P 6 HOH A 5 405 115 HOH HOH . 
P 6 HOH A 6 406 29 HOH HOH . 
P 6 HOH A 7 407 87 HOH HOH . 
P 6 HOH A 8 408 92 HOH HOH . 
P 6 HOH A 9 409 21 HOH HOH . 
P 6 HOH A 10 410 12 HOH HOH . 
P 6 HOH A 11 411 62 HOH HOH . 
P 6 HOH A 12 412 30 HOH HOH . 
P 6 HOH A 13 413 93 HOH HOH . 
P 6 HOH A 14 414 108 HOH HOH . 
P 6 HOH A 15 415 94 HOH HOH . 
P 6 HOH A 16 416 96 HOH HOH . 
P 6 HOH A 17 417 95 HOH HOH . 
P 6 HOH A 18 418 50 HOH HOH . 
P 6 HOH A 19 419 114 HOH HOH . 
P 6 HOH A 20 420 113 HOH HOH . 
P 6 HOH A 21 421 13 HOH HOH . 
P 6 HOH A 22 422 117 HOH HOH . 
P 6 HOH A 23 423 91 HOH HOH . 
P 6 HOH A 24 424 80 HOH HOH . 
Q 6 HOH L 1 401 1 HOH HOH . 
Q 6 HOH L 2 402 37 HOH HOH . 
Q 6 HOH L 3 403 20 HOH HOH . 
Q 6 HOH L 4 404 81 HOH HOH . 
Q 6 HOH L 5 405 100 HOH HOH . 
Q 6 HOH L 6 406 97 HOH HOH . 
Q 6 HOH L 7 407 64 HOH HOH . 
Q 6 HOH L 8 408 11 HOH HOH . 
Q 6 HOH L 9 409 5 HOH HOH . 
Q 6 HOH L 10 410 44 HOH HOH . 
Q 6 HOH L 11 411 40 HOH HOH . 
Q 6 HOH L 12 412 82 HOH HOH . 
Q 6 HOH L 13 413 63 HOH HOH . 
Q 6 HOH L 14 414 23 HOH HOH . 
Q 6 HOH L 15 415 18 HOH HOH . 
Q 6 HOH L 16 416 65 HOH HOH . 
Q 6 HOH L 17 417 38 HOH HOH . 
Q 6 HOH L 18 418 59 HOH HOH . 
Q 6 HOH L 19 419 35 HOH HOH . 
Q 6 HOH L 20 420 109 HOH HOH . 
Q 6 HOH L 21 421 99 HOH HOH . 
Q 6 HOH L 22 422 60 HOH HOH . 
Q 6 HOH L 23 423 83 HOH HOH . 
Q 6 HOH L 24 424 54 HOH HOH . 
Q 6 HOH L 25 425 32 HOH HOH . 
Q 6 HOH L 26 426 55 HOH HOH . 
Q 6 HOH L 27 427 98 HOH HOH . 
R 6 HOH H 1 401 102 HOH HOH . 
R 6 HOH H 2 402 68 HOH HOH . 
R 6 HOH H 3 403 79 HOH HOH . 
R 6 HOH H 4 404 4 HOH HOH . 
R 6 HOH H 5 405 110 HOH HOH . 
R 6 HOH H 6 406 7 HOH HOH . 
R 6 HOH H 7 407 70 HOH HOH . 
R 6 HOH H 8 408 16 HOH HOH . 
R 6 HOH H 9 409 14 HOH HOH . 
R 6 HOH H 10 410 51 HOH HOH . 
R 6 HOH H 11 411 25 HOH HOH . 
R 6 HOH H 12 412 69 HOH HOH . 
R 6 HOH H 13 413 15 HOH HOH . 
R 6 HOH H 14 414 36 HOH HOH . 
R 6 HOH H 15 415 58 HOH HOH . 
R 6 HOH H 16 416 28 HOH HOH . 
R 6 HOH H 17 417 84 HOH HOH . 
R 6 HOH H 18 418 101 HOH HOH . 
R 6 HOH H 19 419 66 HOH HOH . 
R 6 HOH H 20 420 67 HOH HOH . 
R 6 HOH H 21 421 53 HOH HOH . 
R 6 HOH H 22 422 52 HOH HOH . 
R 6 HOH H 23 423 45 HOH HOH . 
R 6 HOH H 24 424 112 HOH HOH . 
R 6 HOH H 25 425 86 HOH HOH . 
R 6 HOH H 26 426 105 HOH HOH . 
S 6 HOH C 1 301 103 HOH HOH . 
S 6 HOH C 2 302 6 HOH HOH . 
S 6 HOH C 3 303 72 HOH HOH . 
S 6 HOH C 4 304 111 HOH HOH . 
S 6 HOH C 5 305 116 HOH HOH . 
S 6 HOH C 6 306 27 HOH HOH . 
S 6 HOH C 7 307 39 HOH HOH . 
S 6 HOH C 8 308 85 HOH HOH . 
S 6 HOH C 9 309 71 HOH HOH . 
T 6 HOH D 1 301 104 HOH HOH . 
T 6 HOH D 2 302 47 HOH HOH . 
T 6 HOH D 3 303 34 HOH HOH . 
T 6 HOH D 4 304 73 HOH HOH . 
T 6 HOH D 5 305 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . J 4 -27.555 -25.703 14.557 1 52.58 ? C1 GOL 301 H 1 
HETATM 2 O O1 GOL . . . J 4 -28.506 -26.576 13.988 1 39.52 ? O1 GOL 301 H 1 
HETATM 3 C C2 GOL . . . J 4 -27.097 -24.7 13.505 1 56.32 ? C2 GOL 301 H 1 
HETATM 4 O O2 GOL . . . J 4 -27.33 -23.39 13.971 1 54.59 ? O2 GOL 301 H 1 
HETATM 5 C C3 GOL . . . J 4 -25.61 -24.885 13.225 1 50.84 ? C3 GOL 301 H 1 
HETATM 6 O O3 GOL . . . J 4 -24.866 -24.471 14.349 1 43.6 ? O3 GOL 301 H 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#