data_5U06 # _model_server_result.job_id tOp5iFvwJNX3d8arCodBbA _model_server_result.datetime_utc '2024-12-26 14:57:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":601}' # _entry.id 5U06 # _exptl.entry_id 5U06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.44 _cell.angle_gamma 90 _cell.entry_id 5U06 _cell.length_a 47.98 _cell.length_b 109.741 _cell.length_c 48.33 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J,K,N,O 1 1 C,D,G,H,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OE1 GLU 27 B GLU 439 1_555 I K K . B K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? covale ? covale1 E N LYS 1 L LYS 1 1_555 E C09 48V 9 L 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale2 E NZ LYS 1 L LYS 1 1_555 E CD GLU 8 L GLU 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale3 E C GLY 4 L GLY 4 1_555 E N 1PA 5 L 1PA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 E C 1PA 5 L 1PA 5 1_555 E N ASP 6 L ASP 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale5 E C GLU 8 L GLU 8 1_555 E N01 48V 9 L 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale6 F N LYS 1 M LYS 1 1_555 F C09 48V 9 M 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.366 ? covale ? covale7 F NZ LYS 1 M LYS 1 1_555 F CD GLU 8 M GLU 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 F C GLY 4 M GLY 4 1_555 F N 1PA 5 M 1PA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale9 F C 1PA 5 M 1PA 5 1_555 F N ASP 6 M ASP 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 F C GLU 8 M GLU 8 1_555 F N01 48V 9 M 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? covale ? covale11 G N LYS 1 N LYS 1 1_555 G C09 48V 9 N 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale12 G NZ LYS 1 N LYS 1 1_555 G CD GLU 8 N GLU 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale13 G C GLY 4 N GLY 4 1_555 G N 1PA 5 N 1PA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale14 G C 1PA 5 N 1PA 5 1_555 G N ASP 6 N ASP 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale15 G C GLU 8 N GLU 8 1_555 G N01 48V 9 N 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale16 H N LYS 1 P LYS 1 1_555 H C09 48V 9 P 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale17 H NZ LYS 1 P LYS 1 1_555 H CD GLU 8 P GLU 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale18 H C GLY 4 P GLY 4 1_555 H N 1PA 5 P 1PA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale19 H C 1PA 5 P 1PA 5 1_555 H N ASP 6 P ASP 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale20 H C GLU 8 P GLU 8 1_555 H N01 48V 9 P 48V 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? metalc ? metalc2 I K K . B K 601 1_555 K O HOH . B HOH 718 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc3 A OG SER 25 A SER 437 1_555 I K K . B K 601 1_454 ? ? ? ? ? ? ? ? ? ? ? ? 3.398 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5U06 _atom_sites.fract_transf_matrix[1][1] 0.020842 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004981 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 K B 1 601 1 K K . J 4 HOH A 1 601 148 HOH HOH . J 4 HOH A 2 602 48 HOH HOH . J 4 HOH A 3 603 130 HOH HOH . J 4 HOH A 4 604 11 HOH HOH . J 4 HOH A 5 605 1 HOH HOH . J 4 HOH A 6 606 5 HOH HOH . J 4 HOH A 7 607 116 HOH HOH . J 4 HOH A 8 608 69 HOH HOH . J 4 HOH A 9 609 117 HOH HOH . J 4 HOH A 10 610 19 HOH HOH . J 4 HOH A 11 611 77 HOH HOH . J 4 HOH A 12 612 141 HOH HOH . J 4 HOH A 13 613 60 HOH HOH . J 4 HOH A 14 614 150 HOH HOH . J 4 HOH A 15 615 27 HOH HOH . J 4 HOH A 16 616 96 HOH HOH . J 4 HOH A 17 617 12 HOH HOH . J 4 HOH A 18 618 62 HOH HOH . J 4 HOH A 19 619 149 HOH HOH . J 4 HOH A 20 620 43 HOH HOH . J 4 HOH A 21 621 111 HOH HOH . J 4 HOH A 22 622 18 HOH HOH . J 4 HOH A 23 623 142 HOH HOH . J 4 HOH A 24 624 39 HOH HOH . J 4 HOH A 25 625 31 HOH HOH . J 4 HOH A 26 626 135 HOH HOH . J 4 HOH A 27 627 97 HOH HOH . J 4 HOH A 28 628 84 HOH HOH . J 4 HOH A 29 629 3 HOH HOH . J 4 HOH A 30 630 98 HOH HOH . J 4 HOH A 31 631 100 HOH HOH . J 4 HOH A 32 632 86 HOH HOH . J 4 HOH A 33 633 51 HOH HOH . J 4 HOH A 34 634 181 HOH HOH . J 4 HOH A 35 635 40 HOH HOH . J 4 HOH A 36 636 87 HOH HOH . J 4 HOH A 37 637 22 HOH HOH . J 4 HOH A 38 638 14 HOH HOH . J 4 HOH A 39 639 65 HOH HOH . J 4 HOH A 40 640 183 HOH HOH . J 4 HOH A 41 641 169 HOH HOH . J 4 HOH A 42 642 6 HOH HOH . J 4 HOH A 43 643 167 HOH HOH . J 4 HOH A 44 644 58 HOH HOH . J 4 HOH A 45 645 151 HOH HOH . J 4 HOH A 46 646 8 HOH HOH . J 4 HOH A 47 647 112 HOH HOH . J 4 HOH A 48 648 153 HOH HOH . J 4 HOH A 49 649 170 HOH HOH . J 4 HOH A 50 650 94 HOH HOH . J 4 HOH A 51 651 187 HOH HOH . J 4 HOH A 52 652 184 HOH HOH . J 4 HOH A 53 653 120 HOH HOH . J 4 HOH A 54 654 171 HOH HOH . J 4 HOH A 55 655 172 HOH HOH . J 4 HOH A 56 656 190 HOH HOH . K 4 HOH B 1 701 128 HOH HOH . K 4 HOH B 2 702 140 HOH HOH . K 4 HOH B 3 703 24 HOH HOH . K 4 HOH B 4 704 73 HOH HOH . K 4 HOH B 5 705 123 HOH HOH . K 4 HOH B 6 706 122 HOH HOH . K 4 HOH B 7 707 64 HOH HOH . K 4 HOH B 8 708 139 HOH HOH . K 4 HOH B 9 709 38 HOH HOH . K 4 HOH B 10 710 59 HOH HOH . K 4 HOH B 11 711 54 HOH HOH . K 4 HOH B 12 712 121 HOH HOH . K 4 HOH B 13 713 110 HOH HOH . K 4 HOH B 14 714 131 HOH HOH . K 4 HOH B 15 715 49 HOH HOH . K 4 HOH B 16 716 23 HOH HOH . K 4 HOH B 17 717 103 HOH HOH . K 4 HOH B 18 718 188 HOH HOH . K 4 HOH B 19 719 179 HOH HOH . K 4 HOH B 20 720 75 HOH HOH . K 4 HOH B 21 721 102 HOH HOH . K 4 HOH B 22 722 47 HOH HOH . K 4 HOH B 23 723 165 HOH HOH . K 4 HOH B 24 724 74 HOH HOH . K 4 HOH B 25 725 25 HOH HOH . K 4 HOH B 26 726 92 HOH HOH . K 4 HOH B 27 727 32 HOH HOH . K 4 HOH B 28 728 68 HOH HOH . K 4 HOH B 29 729 56 HOH HOH . K 4 HOH B 30 730 125 HOH HOH . K 4 HOH B 31 731 81 HOH HOH . K 4 HOH B 32 732 173 HOH HOH . K 4 HOH B 33 733 152 HOH HOH . K 4 HOH B 34 734 168 HOH HOH . L 4 HOH C 1 601 15 HOH HOH . L 4 HOH C 2 602 107 HOH HOH . L 4 HOH C 3 603 126 HOH HOH . L 4 HOH C 4 604 79 HOH HOH . L 4 HOH C 5 605 55 HOH HOH . L 4 HOH C 6 606 144 HOH HOH . L 4 HOH C 7 607 42 HOH HOH . L 4 HOH C 8 608 136 HOH HOH . L 4 HOH C 9 609 13 HOH HOH . L 4 HOH C 10 610 101 HOH HOH . L 4 HOH C 11 611 83 HOH HOH . L 4 HOH C 12 612 155 HOH HOH . L 4 HOH C 13 613 52 HOH HOH . L 4 HOH C 14 614 154 HOH HOH . L 4 HOH C 15 615 46 HOH HOH . L 4 HOH C 16 616 82 HOH HOH . L 4 HOH C 17 617 4 HOH HOH . L 4 HOH C 18 618 10 HOH HOH . L 4 HOH C 19 619 91 HOH HOH . L 4 HOH C 20 620 90 HOH HOH . L 4 HOH C 21 621 88 HOH HOH . L 4 HOH C 22 622 156 HOH HOH . L 4 HOH C 23 623 30 HOH HOH . L 4 HOH C 24 624 66 HOH HOH . L 4 HOH C 25 625 137 HOH HOH . L 4 HOH C 26 626 26 HOH HOH . L 4 HOH C 27 627 63 HOH HOH . L 4 HOH C 28 628 175 HOH HOH . L 4 HOH C 29 629 80 HOH HOH . L 4 HOH C 30 630 104 HOH HOH . L 4 HOH C 31 631 113 HOH HOH . L 4 HOH C 32 632 93 HOH HOH . L 4 HOH C 33 633 124 HOH HOH . L 4 HOH C 34 634 174 HOH HOH . L 4 HOH C 35 635 145 HOH HOH . M 4 HOH D 1 601 71 HOH HOH . M 4 HOH D 2 602 20 HOH HOH . M 4 HOH D 3 603 67 HOH HOH . M 4 HOH D 4 604 61 HOH HOH . M 4 HOH D 5 605 127 HOH HOH . M 4 HOH D 6 606 95 HOH HOH . M 4 HOH D 7 607 29 HOH HOH . M 4 HOH D 8 608 28 HOH HOH . M 4 HOH D 9 609 162 HOH HOH . M 4 HOH D 10 610 160 HOH HOH . M 4 HOH D 11 611 159 HOH HOH . M 4 HOH D 12 612 129 HOH HOH . M 4 HOH D 13 613 189 HOH HOH . M 4 HOH D 14 614 114 HOH HOH . M 4 HOH D 15 615 35 HOH HOH . M 4 HOH D 16 616 7 HOH HOH . M 4 HOH D 17 617 72 HOH HOH . M 4 HOH D 18 618 34 HOH HOH . M 4 HOH D 19 619 44 HOH HOH . M 4 HOH D 20 620 147 HOH HOH . M 4 HOH D 21 621 134 HOH HOH . M 4 HOH D 22 622 161 HOH HOH . M 4 HOH D 23 623 118 HOH HOH . M 4 HOH D 24 624 106 HOH HOH . M 4 HOH D 25 625 105 HOH HOH . M 4 HOH D 26 626 158 HOH HOH . M 4 HOH D 27 627 115 HOH HOH . M 4 HOH D 28 628 166 HOH HOH . M 4 HOH D 29 629 89 HOH HOH . M 4 HOH D 30 630 182 HOH HOH . M 4 HOH D 31 631 132 HOH HOH . M 4 HOH D 32 632 70 HOH HOH . M 4 HOH D 33 633 9 HOH HOH . M 4 HOH D 34 634 53 HOH HOH . M 4 HOH D 35 635 157 HOH HOH . M 4 HOH D 36 636 191 HOH HOH . M 4 HOH D 37 637 119 HOH HOH . M 4 HOH D 38 638 176 HOH HOH . M 4 HOH D 39 639 177 HOH HOH . M 4 HOH D 40 640 85 HOH HOH . M 4 HOH D 41 641 178 HOH HOH . N 4 HOH L 1 101 50 HOH HOH . N 4 HOH L 2 102 185 HOH HOH . N 4 HOH L 3 103 17 HOH HOH . N 4 HOH L 4 104 33 HOH HOH . N 4 HOH L 5 105 146 HOH HOH . N 4 HOH L 6 106 186 HOH HOH . O 4 HOH M 1 101 57 HOH HOH . O 4 HOH M 2 102 36 HOH HOH . O 4 HOH M 3 103 108 HOH HOH . O 4 HOH M 4 104 45 HOH HOH . O 4 HOH M 5 105 78 HOH HOH . O 4 HOH M 6 106 164 HOH HOH . P 4 HOH N 1 101 16 HOH HOH . P 4 HOH N 2 102 41 HOH HOH . P 4 HOH N 3 103 99 HOH HOH . P 4 HOH N 4 104 133 HOH HOH . P 4 HOH N 5 105 76 HOH HOH . P 4 HOH N 6 106 163 HOH HOH . P 4 HOH N 7 107 109 HOH HOH . P 4 HOH N 8 108 143 HOH HOH . Q 4 HOH P 1 101 138 HOH HOH . Q 4 HOH P 2 102 2 HOH HOH . Q 4 HOH P 3 103 180 HOH HOH . Q 4 HOH P 4 104 37 HOH HOH . Q 4 HOH P 5 105 21 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.727 _atom_site.Cartn_y -17.108 _atom_site.Cartn_z 25.494 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #