data_5U10 # _model_server_result.job_id exzN2hGgOsswwbvM4QMWpw _model_server_result.datetime_utc '2024-11-08 18:37:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u10 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 5U10 # _exptl.entry_id 5U10 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.283 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PTEROIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.03 _cell.angle_gamma 90 _cell.entry_id 5U10 _cell.length_a 96.541 _cell.length_b 83.868 _cell.length_c 83.933 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U10 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -60.239842 0 156.684892 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C14 H12 N6 O3' _chem_comp.formula_weight 312.283 _chem_comp.id PT1 _chem_comp.mon_nstd_flag . _chem_comp.name 'PTEROIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 PT1 sing 281 n y C2 O1 PT1 sing 282 n n C2 N4 PT1 doub 283 n y C3 C5 PT1 doub 284 n y C3 N6 PT1 sing 285 n y C5 N9 PT1 sing 286 n y C5 N8 PT1 sing 287 n y N6 C10 PT1 doub 288 n y C7 N9 PT1 doub 289 n y C7 N11 PT1 sing 290 n n C7 N4 PT1 sing 291 n y C10 C12 PT1 sing 292 n y C10 C13 PT1 sing 293 n n N11 H111 PT1 sing 294 n n N11 H112 PT1 sing 295 n n C12 N8 PT1 doub 296 n y C12 H12 PT1 sing 297 n n C21 O22 PT1 doub 298 n n C21 C20 PT1 sing 299 n n C21 O23 PT1 sing 300 n n O1 HO1 PT1 sing 301 n n C13 N14 PT1 sing 302 n n C13 H131 PT1 sing 303 n n C13 H132 PT1 sing 304 n n N14 C15 PT1 sing 305 n n N14 H14 PT1 sing 306 n n C15 C16 PT1 doub 307 n y C15 C17 PT1 sing 308 n y C16 C18 PT1 sing 309 n y C16 H16 PT1 sing 310 n n C17 C19 PT1 doub 311 n y C17 H17 PT1 sing 312 n n C18 C20 PT1 doub 313 n y C18 H18 PT1 sing 314 n n C19 C20 PT1 sing 315 n y C19 H19 PT1 sing 316 n n O23 H23 PT1 sing 317 n n # _atom_sites.entry_id 5U10 _atom_sites.fract_transf_matrix[1][1] 0.010358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003983 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012765 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 3 PO4 PO4 . D 3 PT1 A 1 302 3 PT1 PT1 . E 2 PO4 B 1 301 4 PO4 PO4 . F 3 PT1 B 1 302 4 PT1 PT1 . G 4 HOH A 1 401 85 HOH HOH . G 4 HOH A 2 402 67 HOH HOH . G 4 HOH A 3 403 65 HOH HOH . G 4 HOH A 4 404 92 HOH HOH . G 4 HOH A 5 405 3 HOH HOH . G 4 HOH A 6 406 8 HOH HOH . G 4 HOH A 7 407 45 HOH HOH . G 4 HOH A 8 408 55 HOH HOH . G 4 HOH A 9 409 7 HOH HOH . G 4 HOH A 10 410 138 HOH HOH . G 4 HOH A 11 411 24 HOH HOH . G 4 HOH A 12 412 32 HOH HOH . G 4 HOH A 13 413 16 HOH HOH . G 4 HOH A 14 414 15 HOH HOH . G 4 HOH A 15 415 4 HOH HOH . G 4 HOH A 16 416 11 HOH HOH . G 4 HOH A 17 417 91 HOH HOH . G 4 HOH A 18 418 103 HOH HOH . G 4 HOH A 19 419 62 HOH HOH . G 4 HOH A 20 420 20 HOH HOH . G 4 HOH A 21 421 9 HOH HOH . G 4 HOH A 22 422 53 HOH HOH . G 4 HOH A 23 423 72 HOH HOH . G 4 HOH A 24 424 102 HOH HOH . G 4 HOH A 25 425 25 HOH HOH . G 4 HOH A 26 426 76 HOH HOH . G 4 HOH A 27 427 81 HOH HOH . G 4 HOH A 28 428 48 HOH HOH . G 4 HOH A 29 429 137 HOH HOH . G 4 HOH A 30 430 86 HOH HOH . G 4 HOH A 31 431 22 HOH HOH . G 4 HOH A 32 432 94 HOH HOH . G 4 HOH A 33 433 26 HOH HOH . G 4 HOH A 34 434 97 HOH HOH . G 4 HOH A 35 435 83 HOH HOH . G 4 HOH A 36 436 5 HOH HOH . G 4 HOH A 37 437 84 HOH HOH . G 4 HOH A 38 438 98 HOH HOH . G 4 HOH A 39 439 59 HOH HOH . G 4 HOH A 40 440 52 HOH HOH . G 4 HOH A 41 441 19 HOH HOH . G 4 HOH A 42 442 70 HOH HOH . G 4 HOH A 43 443 99 HOH HOH . G 4 HOH A 44 444 68 HOH HOH . G 4 HOH A 45 445 60 HOH HOH . G 4 HOH A 46 446 125 HOH HOH . G 4 HOH A 47 447 134 HOH HOH . G 4 HOH A 48 448 17 HOH HOH . G 4 HOH A 49 449 78 HOH HOH . G 4 HOH A 50 450 136 HOH HOH . G 4 HOH A 51 451 89 HOH HOH . G 4 HOH A 52 452 42 HOH HOH . G 4 HOH A 53 453 51 HOH HOH . G 4 HOH A 54 454 63 HOH HOH . G 4 HOH A 55 455 140 HOH HOH . G 4 HOH A 56 456 46 HOH HOH . G 4 HOH A 57 457 33 HOH HOH . G 4 HOH A 58 458 30 HOH HOH . G 4 HOH A 59 459 73 HOH HOH . G 4 HOH A 60 460 90 HOH HOH . G 4 HOH A 61 461 96 HOH HOH . G 4 HOH A 62 462 100 HOH HOH . G 4 HOH A 63 463 95 HOH HOH . G 4 HOH A 64 464 71 HOH HOH . G 4 HOH A 65 465 141 HOH HOH . G 4 HOH A 66 466 87 HOH HOH . G 4 HOH A 67 467 93 HOH HOH . G 4 HOH A 68 468 77 HOH HOH . G 4 HOH A 69 469 37 HOH HOH . G 4 HOH A 70 470 128 HOH HOH . G 4 HOH A 71 471 57 HOH HOH . G 4 HOH A 72 472 56 HOH HOH . H 4 HOH B 1 401 79 HOH HOH . H 4 HOH B 2 402 64 HOH HOH . H 4 HOH B 3 403 129 HOH HOH . H 4 HOH B 4 404 23 HOH HOH . H 4 HOH B 5 405 27 HOH HOH . H 4 HOH B 6 406 54 HOH HOH . H 4 HOH B 7 407 43 HOH HOH . H 4 HOH B 8 408 21 HOH HOH . H 4 HOH B 9 409 50 HOH HOH . H 4 HOH B 10 410 1 HOH HOH . H 4 HOH B 11 411 130 HOH HOH . H 4 HOH B 12 412 115 HOH HOH . H 4 HOH B 13 413 38 HOH HOH . H 4 HOH B 14 414 126 HOH HOH . H 4 HOH B 15 415 12 HOH HOH . H 4 HOH B 16 416 41 HOH HOH . H 4 HOH B 17 417 28 HOH HOH . H 4 HOH B 18 418 47 HOH HOH . H 4 HOH B 19 419 14 HOH HOH . H 4 HOH B 20 420 135 HOH HOH . H 4 HOH B 21 421 109 HOH HOH . H 4 HOH B 22 422 118 HOH HOH . H 4 HOH B 23 423 107 HOH HOH . H 4 HOH B 24 424 80 HOH HOH . H 4 HOH B 25 425 88 HOH HOH . H 4 HOH B 26 426 18 HOH HOH . H 4 HOH B 27 427 69 HOH HOH . H 4 HOH B 28 428 74 HOH HOH . H 4 HOH B 29 429 58 HOH HOH . H 4 HOH B 30 430 49 HOH HOH . H 4 HOH B 31 431 127 HOH HOH . H 4 HOH B 32 432 34 HOH HOH . H 4 HOH B 33 433 2 HOH HOH . H 4 HOH B 34 434 35 HOH HOH . H 4 HOH B 35 435 31 HOH HOH . H 4 HOH B 36 436 132 HOH HOH . H 4 HOH B 37 437 66 HOH HOH . H 4 HOH B 38 438 13 HOH HOH . H 4 HOH B 39 439 10 HOH HOH . H 4 HOH B 40 440 123 HOH HOH . H 4 HOH B 41 441 124 HOH HOH . H 4 HOH B 42 442 131 HOH HOH . H 4 HOH B 43 443 82 HOH HOH . H 4 HOH B 44 444 108 HOH HOH . H 4 HOH B 45 445 75 HOH HOH . H 4 HOH B 46 446 111 HOH HOH . H 4 HOH B 47 447 117 HOH HOH . H 4 HOH B 48 448 119 HOH HOH . H 4 HOH B 49 449 40 HOH HOH . H 4 HOH B 50 450 36 HOH HOH . H 4 HOH B 51 451 105 HOH HOH . H 4 HOH B 52 452 39 HOH HOH . H 4 HOH B 53 453 29 HOH HOH . H 4 HOH B 54 454 120 HOH HOH . H 4 HOH B 55 455 116 HOH HOH . H 4 HOH B 56 456 121 HOH HOH . H 4 HOH B 57 457 104 HOH HOH . H 4 HOH B 58 458 133 HOH HOH . H 4 HOH B 59 459 61 HOH HOH . H 4 HOH B 60 460 110 HOH HOH . H 4 HOH B 61 461 106 HOH HOH . H 4 HOH B 62 462 112 HOH HOH . H 4 HOH B 63 463 6 HOH HOH . H 4 HOH B 64 464 139 HOH HOH . H 4 HOH B 65 465 114 HOH HOH . H 4 HOH B 66 466 101 HOH HOH . H 4 HOH B 67 467 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PT1 . . . D 3 -20.002 1.084 102.156 1 40.66 ? C2 PT1 302 A 1 HETATM 2 C C3 PT1 . . . D 3 -20.934 0.1 102.772 1 37.88 ? C3 PT1 302 A 1 HETATM 3 C C5 PT1 . . . D 3 -20.586 -0.337 104.114 1 36.31 ? C5 PT1 302 A 1 HETATM 4 N N6 PT1 . . . D 3 -22.022 -0.398 102.182 1 39.48 ? N6 PT1 302 A 1 HETATM 5 C C7 PT1 . . . D 3 -18.687 1.014 104.086 1 38.63 ? C7 PT1 302 A 1 HETATM 6 N N9 PT1 . . . D 3 -19.493 0.138 104.701 1 39.32 ? N9 PT1 302 A 1 HETATM 7 C C10 PT1 . . . D 3 -22.817 -1.254 102.844 1 43.31 ? C10 PT1 302 A 1 HETATM 8 N N11 PT1 . . . D 3 -17.596 1.506 104.696 1 35.88 ? N11 PT1 302 A 1 HETATM 9 C C12 PT1 . . . D 3 -22.466 -1.644 104.125 1 42.96 ? C12 PT1 302 A 1 HETATM 10 C C21 PT1 . . . D 3 -27.237 -0.1 96.926 1 40.61 ? C21 PT1 302 A 1 HETATM 11 O O22 PT1 . . . D 3 -27.644 -1.017 96.228 1 36.61 ? O22 PT1 302 A 1 HETATM 12 O O1 PT1 . . . D 3 -20.157 1.569 100.936 1 33.65 ? O1 PT1 302 A 1 HETATM 13 N N4 PT1 . . . D 3 -18.936 1.469 102.857 1 42.43 ? N4 PT1 302 A 1 HETATM 14 N N8 PT1 . . . D 3 -21.38 -1.191 104.728 1 44.17 ? N8 PT1 302 A 1 HETATM 15 C C13 PT1 . . . D 3 -24.075 -1.844 102.229 1 45.07 ? C13 PT1 302 A 1 HETATM 16 N N14 PT1 . . . D 3 -25.147 -0.901 102.062 1 48.75 ? N14 PT1 302 A 1 HETATM 17 C C15 PT1 . . . D 3 -25.651 -0.73 100.838 1 47.59 ? C15 PT1 302 A 1 HETATM 18 C C16 PT1 . . . D 3 -25.921 0.533 100.385 1 45.04 ? C16 PT1 302 A 1 HETATM 19 C C17 PT1 . . . D 3 -25.929 -1.819 100.024 1 48.02 ? C17 PT1 302 A 1 HETATM 20 C C18 PT1 . . . D 3 -26.442 0.702 99.126 1 42.62 ? C18 PT1 302 A 1 HETATM 21 C C19 PT1 . . . D 3 -26.446 -1.65 98.758 1 46.48 ? C19 PT1 302 A 1 HETATM 22 C C20 PT1 . . . D 3 -26.701 -0.366 98.299 1 41.45 ? C20 PT1 302 A 1 HETATM 23 O O23 PT1 . . . D 3 -27.224 1.063 96.539 1 37.65 ? O23 PT1 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #