data_5U26 # _model_server_result.job_id 3wU8N6vF6X2OuizykuDTnQ _model_server_result.datetime_utc '2024-11-25 03:01:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u26 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5U26 # _exptl.entry_id 5U26 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.408 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U26 _cell.length_a 29.05 _cell.length_b 66.98 _cell.length_c 77.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U26 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H24 N4 O4' _chem_comp.formula_weight 360.408 _chem_comp.id MMV _chem_comp.mon_nstd_flag . _chem_comp.name '3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C3 MMV sing 246 n n C3 N4 MMV doub 247 n y C3 N2 MMV sing 248 n y N4 C5 MMV sing 249 n y N2 C1 MMV doub 250 n y C10 C9 MMV sing 251 n n C5 C9 MMV sing 252 n n C5 C6 MMV doub 253 n y O26 C24 MMV doub 254 n n O25 C24 MMV sing 255 n n C1 C6 MMV sing 256 n y C1 N7 MMV sing 257 n n C24 C23 MMV sing 258 n n C6 O11 MMV sing 259 n n C23 C22 MMV sing 260 n n O11 C12 MMV sing 261 n n C12 C13 MMV sing 262 n n C22 C17 MMV sing 263 n n C17 C18 MMV doub 264 n y C17 C16 MMV sing 265 n y C18 C19 MMV sing 266 n y O15 C16 MMV sing 267 n n O15 C14 MMV sing 268 n n C13 C14 MMV sing 269 n n C16 C21 MMV doub 270 n y C19 C20 MMV doub 271 n y C21 C20 MMV sing 272 n y N7 H1 MMV sing 273 n n N7 H2 MMV sing 274 n n N8 H3 MMV sing 275 n n N8 H4 MMV sing 276 n n C9 H5 MMV sing 277 n n C9 H6 MMV sing 278 n n C10 H7 MMV sing 279 n n C10 H8 MMV sing 280 n n C10 H9 MMV sing 281 n n C12 H10 MMV sing 282 n n C12 H11 MMV sing 283 n n C13 H12 MMV sing 284 n n C13 H13 MMV sing 285 n n C14 H14 MMV sing 286 n n C14 H15 MMV sing 287 n n C18 H16 MMV sing 288 n n C19 H17 MMV sing 289 n n C20 H18 MMV sing 290 n n C21 H19 MMV sing 291 n n C22 H20 MMV sing 292 n n C22 H21 MMV sing 293 n n C23 H22 MMV sing 294 n n C23 H23 MMV sing 295 n n O25 H24 MMV sing 296 n n # _atom_sites.entry_id 5U26 _atom_sites.fract_transf_matrix[1][1] 0.034423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012943 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MMV A 1 201 1 MMV 218 . C 3 NAP A 1 202 1 NAP NAP . D 4 EDO A 1 203 2 EDO EDO . E 5 SO4 A 1 204 1 SO4 SO4 . F 5 SO4 A 1 205 2 SO4 SO4 . G 6 HOH A 1 301 97 HOH HOH . G 6 HOH A 2 302 114 HOH HOH . G 6 HOH A 3 303 76 HOH HOH . G 6 HOH A 4 304 103 HOH HOH . G 6 HOH A 5 305 34 HOH HOH . G 6 HOH A 6 306 122 HOH HOH . G 6 HOH A 7 307 75 HOH HOH . G 6 HOH A 8 308 7 HOH HOH . G 6 HOH A 9 309 46 HOH HOH . G 6 HOH A 10 310 80 HOH HOH . G 6 HOH A 11 311 2 HOH HOH . G 6 HOH A 12 312 16 HOH HOH . G 6 HOH A 13 313 88 HOH HOH . G 6 HOH A 14 314 21 HOH HOH . G 6 HOH A 15 315 15 HOH HOH . G 6 HOH A 16 316 20 HOH HOH . G 6 HOH A 17 317 84 HOH HOH . G 6 HOH A 18 318 6 HOH HOH . G 6 HOH A 19 319 109 HOH HOH . G 6 HOH A 20 320 86 HOH HOH . G 6 HOH A 21 321 56 HOH HOH . G 6 HOH A 22 322 49 HOH HOH . G 6 HOH A 23 323 69 HOH HOH . G 6 HOH A 24 324 113 HOH HOH . G 6 HOH A 25 325 107 HOH HOH . G 6 HOH A 26 326 12 HOH HOH . G 6 HOH A 27 327 94 HOH HOH . G 6 HOH A 28 328 65 HOH HOH . G 6 HOH A 29 329 5 HOH HOH . G 6 HOH A 30 330 66 HOH HOH . G 6 HOH A 31 331 51 HOH HOH . G 6 HOH A 32 332 120 HOH HOH . G 6 HOH A 33 333 11 HOH HOH . G 6 HOH A 34 334 4 HOH HOH . G 6 HOH A 35 335 48 HOH HOH . G 6 HOH A 36 336 70 HOH HOH . G 6 HOH A 37 337 92 HOH HOH . G 6 HOH A 38 338 67 HOH HOH . G 6 HOH A 39 339 14 HOH HOH . G 6 HOH A 40 340 19 HOH HOH . G 6 HOH A 41 341 95 HOH HOH . G 6 HOH A 42 342 10 HOH HOH . G 6 HOH A 43 343 110 HOH HOH . G 6 HOH A 44 344 98 HOH HOH . G 6 HOH A 45 345 81 HOH HOH . G 6 HOH A 46 346 52 HOH HOH . G 6 HOH A 47 347 3 HOH HOH . G 6 HOH A 48 348 108 HOH HOH . G 6 HOH A 49 349 36 HOH HOH . G 6 HOH A 50 350 82 HOH HOH . G 6 HOH A 51 351 42 HOH HOH . G 6 HOH A 52 352 60 HOH HOH . G 6 HOH A 53 353 123 HOH HOH . G 6 HOH A 54 354 41 HOH HOH . G 6 HOH A 55 355 55 HOH HOH . G 6 HOH A 56 356 38 HOH HOH . G 6 HOH A 57 357 119 HOH HOH . G 6 HOH A 58 358 24 HOH HOH . G 6 HOH A 59 359 62 HOH HOH . G 6 HOH A 60 360 72 HOH HOH . G 6 HOH A 61 361 77 HOH HOH . G 6 HOH A 62 362 37 HOH HOH . G 6 HOH A 63 363 44 HOH HOH . G 6 HOH A 64 364 33 HOH HOH . G 6 HOH A 65 365 27 HOH HOH . G 6 HOH A 66 366 104 HOH HOH . G 6 HOH A 67 367 31 HOH HOH . G 6 HOH A 68 368 1 HOH HOH . G 6 HOH A 69 369 8 HOH HOH . G 6 HOH A 70 370 47 HOH HOH . G 6 HOH A 71 371 40 HOH HOH . G 6 HOH A 72 372 96 HOH HOH . G 6 HOH A 73 373 68 HOH HOH . G 6 HOH A 74 374 13 HOH HOH . G 6 HOH A 75 375 71 HOH HOH . G 6 HOH A 76 376 32 HOH HOH . G 6 HOH A 77 377 63 HOH HOH . G 6 HOH A 78 378 87 HOH HOH . G 6 HOH A 79 379 112 HOH HOH . G 6 HOH A 80 380 74 HOH HOH . G 6 HOH A 81 381 28 HOH HOH . G 6 HOH A 82 382 91 HOH HOH . G 6 HOH A 83 383 117 HOH HOH . G 6 HOH A 84 384 50 HOH HOH . G 6 HOH A 85 385 23 HOH HOH . G 6 HOH A 86 386 18 HOH HOH . G 6 HOH A 87 387 54 HOH HOH . G 6 HOH A 88 388 90 HOH HOH . G 6 HOH A 89 389 64 HOH HOH . G 6 HOH A 90 390 101 HOH HOH . G 6 HOH A 91 391 22 HOH HOH . G 6 HOH A 92 392 43 HOH HOH . G 6 HOH A 93 393 45 HOH HOH . G 6 HOH A 94 394 26 HOH HOH . G 6 HOH A 95 395 85 HOH HOH . G 6 HOH A 96 396 100 HOH HOH . G 6 HOH A 97 397 83 HOH HOH . G 6 HOH A 98 398 78 HOH HOH . G 6 HOH A 99 399 58 HOH HOH . G 6 HOH A 100 400 17 HOH HOH . G 6 HOH A 101 401 53 HOH HOH . G 6 HOH A 102 402 39 HOH HOH . G 6 HOH A 103 403 25 HOH HOH . G 6 HOH A 104 404 29 HOH HOH . G 6 HOH A 105 405 35 HOH HOH . G 6 HOH A 106 406 116 HOH HOH . G 6 HOH A 107 407 124 HOH HOH . G 6 HOH A 108 408 106 HOH HOH . G 6 HOH A 109 409 9 HOH HOH . G 6 HOH A 110 410 73 HOH HOH . G 6 HOH A 111 411 105 HOH HOH . G 6 HOH A 112 412 59 HOH HOH . G 6 HOH A 113 413 121 HOH HOH . G 6 HOH A 114 414 61 HOH HOH . G 6 HOH A 115 415 57 HOH HOH . G 6 HOH A 116 416 79 HOH HOH . G 6 HOH A 117 417 111 HOH HOH . G 6 HOH A 118 418 93 HOH HOH . G 6 HOH A 119 419 30 HOH HOH . G 6 HOH A 120 420 115 HOH HOH . G 6 HOH A 121 421 89 HOH HOH . G 6 HOH A 122 422 102 HOH HOH . G 6 HOH A 123 423 99 HOH HOH . G 6 HOH A 124 424 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MMV . . . B 2 -5.987 -2.646 12.986 1 5.36 ? C1 MMV 201 A 1 HETATM 2 N N2 MMV . . . B 2 -5.886 -3.838 13.621 1 5.57 ? N2 MMV 201 A 1 HETATM 3 C C3 MMV . . . B 2 -4.981 -3.96 14.613 1 6.26 ? C3 MMV 201 A 1 HETATM 4 N N4 MMV . . . B 2 -4.198 -2.926 14.974 1 7.12 ? N4 MMV 201 A 1 HETATM 5 C C5 MMV . . . B 2 -4.277 -1.729 14.368 1 6.45 ? C5 MMV 201 A 1 HETATM 6 C C6 MMV . . . B 2 -5.196 -1.561 13.36 1 7.01 ? C6 MMV 201 A 1 HETATM 7 N N7 MMV . . . B 2 -6.983 -2.532 11.929 1 4.48 ? N7 MMV 201 A 1 HETATM 8 N N8 MMV . . . B 2 -4.807 -5.221 15.337 1 7.72 ? N8 MMV 201 A 1 HETATM 9 C C9 MMV . . . B 2 -3.368 -0.595 14.818 1 9.97 ? C9 MMV 201 A 1 HETATM 10 C C10 MMV . . . B 2 -1.919 -0.997 14.55 1 13.19 ? C10 MMV 201 A 1 HETATM 11 O O11 MMV . . . B 2 -5.288 -0.349 12.717 1 8.68 ? O11 MMV 201 A 1 HETATM 12 C C12 MMV . . . B 2 -4.689 -0.207 11.423 1 9.08 ? C12 MMV 201 A 1 HETATM 13 C C13 MMV . . . B 2 -4.711 1.266 11.002 1 9.34 ? C13 MMV 201 A 1 HETATM 14 C C14 MMV . . . B 2 -3.847 2.124 11.917 1 8.97 ? C14 MMV 201 A 1 HETATM 15 O O15 MMV . . . B 2 -2.513 1.668 11.778 1 14.92 ? O15 MMV 201 A 1 HETATM 16 C C16 MMV . . . B 2 -1.515 2.115 12.609 1 17.09 ? C16 MMV 201 A 1 HETATM 17 C C17 MMV . . . B 2 -0.239 1.6 12.446 1 18.34 ? C17 MMV 201 A 1 HETATM 18 C C18 MMV . . . B 2 0.791 2.028 13.276 1 17.35 ? C18 MMV 201 A 1 HETATM 19 C C19 MMV . . . B 2 0.534 2.985 14.252 1 14.88 ? C19 MMV 201 A 1 HETATM 20 C C20 MMV . . . B 2 -0.747 3.511 14.407 1 17.39 ? C20 MMV 201 A 1 HETATM 21 C C21 MMV . . . B 2 -1.785 3.082 13.583 1 16.32 ? C21 MMV 201 A 1 HETATM 22 C C22 MMV . . . B 2 0.009 0.555 11.373 1 19.45 ? C22 MMV 201 A 1 HETATM 23 C C23 MMV . . . B 2 1.478 0.403 10.997 1 21.12 ? C23 MMV 201 A 1 HETATM 24 C C24 MMV . . . B 2 1.632 -0.427 9.737 1 22.33 ? C24 MMV 201 A 1 HETATM 25 O O25 MMV . . . B 2 0.838 -1.369 9.541 1 16.56 ? O25 MMV 201 A 1 HETATM 26 O O26 MMV . . . B 2 2.562 -0.163 8.929 1 25.73 ? O26 MMV 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #