data_5U28 # _model_server_result.job_id sAP3KB8Q3EzZ9l0pe8EhjA _model_server_result.datetime_utc '2024-11-22 20:43:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 5U28 # _exptl.entry_id 5U28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U28 _cell.length_a 43.972 _cell.length_b 59.151 _cell.length_c 63.675 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 284 n n C1 C2 PEG sing 285 n n C1 H11 PEG sing 286 n n C1 H12 PEG sing 287 n n O1 HO1 PEG sing 288 n n C2 O2 PEG sing 289 n n C2 H21 PEG sing 290 n n C2 H22 PEG sing 291 n n O2 C3 PEG sing 292 n n C3 C4 PEG sing 293 n n C3 H31 PEG sing 294 n n C3 H32 PEG sing 295 n n C4 O4 PEG sing 296 n n C4 H41 PEG sing 297 n n C4 H42 PEG sing 298 n n O4 HO4 PEG sing 299 n n # _atom_sites.entry_id 5U28 _atom_sites.fract_transf_matrix[1][1] 0.022742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015705 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 82V A 1 201 1 82V LIG . C 3 PEG A 1 202 1 PEG PEG . D 4 SCN A 1 203 1 SCN SCN . E 5 HOH A 1 301 145 HOH HOH . E 5 HOH A 2 302 83 HOH HOH . E 5 HOH A 3 303 103 HOH HOH . E 5 HOH A 4 304 126 HOH HOH . E 5 HOH A 5 305 50 HOH HOH . E 5 HOH A 6 306 1 HOH HOH . E 5 HOH A 7 307 147 HOH HOH . E 5 HOH A 8 308 53 HOH HOH . E 5 HOH A 9 309 24 HOH HOH . E 5 HOH A 10 310 1 HOH HOH . E 5 HOH A 11 311 23 HOH HOH . E 5 HOH A 12 312 68 HOH HOH . E 5 HOH A 13 313 118 HOH HOH . E 5 HOH A 14 314 4 HOH HOH . E 5 HOH A 15 315 106 HOH HOH . E 5 HOH A 16 316 20 HOH HOH . E 5 HOH A 17 317 75 HOH HOH . E 5 HOH A 18 318 149 HOH HOH . E 5 HOH A 19 319 43 HOH HOH . E 5 HOH A 20 320 87 HOH HOH . E 5 HOH A 21 321 116 HOH HOH . E 5 HOH A 22 322 31 HOH HOH . E 5 HOH A 23 323 117 HOH HOH . E 5 HOH A 24 324 108 HOH HOH . E 5 HOH A 25 325 72 HOH HOH . E 5 HOH A 26 326 124 HOH HOH . E 5 HOH A 27 327 28 HOH HOH . E 5 HOH A 28 328 63 HOH HOH . E 5 HOH A 29 329 99 HOH HOH . E 5 HOH A 30 330 81 HOH HOH . E 5 HOH A 31 331 107 HOH HOH . E 5 HOH A 32 332 79 HOH HOH . E 5 HOH A 33 333 25 HOH HOH . E 5 HOH A 34 334 45 HOH HOH . E 5 HOH A 35 335 139 HOH HOH . E 5 HOH A 36 336 12 HOH HOH . E 5 HOH A 37 337 110 HOH HOH . E 5 HOH A 38 338 14 HOH HOH . E 5 HOH A 39 339 96 HOH HOH . E 5 HOH A 40 340 150 HOH HOH . E 5 HOH A 41 341 130 HOH HOH . E 5 HOH A 42 342 30 HOH HOH . E 5 HOH A 43 343 112 HOH HOH . E 5 HOH A 44 344 10 HOH HOH . E 5 HOH A 45 345 18 HOH HOH . E 5 HOH A 46 346 92 HOH HOH . E 5 HOH A 47 347 21 HOH HOH . E 5 HOH A 48 348 15 HOH HOH . E 5 HOH A 49 349 5 HOH HOH . E 5 HOH A 50 350 88 HOH HOH . E 5 HOH A 51 351 33 HOH HOH . E 5 HOH A 52 352 16 HOH HOH . E 5 HOH A 53 353 47 HOH HOH . E 5 HOH A 54 354 77 HOH HOH . E 5 HOH A 55 355 4 HOH HOH . E 5 HOH A 56 356 143 HOH HOH . E 5 HOH A 57 357 26 HOH HOH . E 5 HOH A 58 358 64 HOH HOH . E 5 HOH A 59 359 62 HOH HOH . E 5 HOH A 60 360 58 HOH HOH . E 5 HOH A 61 361 41 HOH HOH . E 5 HOH A 62 362 13 HOH HOH . E 5 HOH A 63 363 59 HOH HOH . E 5 HOH A 64 364 73 HOH HOH . E 5 HOH A 65 365 121 HOH HOH . E 5 HOH A 66 366 2 HOH HOH . E 5 HOH A 67 367 9 HOH HOH . E 5 HOH A 68 368 40 HOH HOH . E 5 HOH A 69 369 119 HOH HOH . E 5 HOH A 70 370 38 HOH HOH . E 5 HOH A 71 371 39 HOH HOH . E 5 HOH A 72 372 27 HOH HOH . E 5 HOH A 73 373 2 HOH HOH . E 5 HOH A 74 374 70 HOH HOH . E 5 HOH A 75 375 55 HOH HOH . E 5 HOH A 76 376 49 HOH HOH . E 5 HOH A 77 377 32 HOH HOH . E 5 HOH A 78 378 74 HOH HOH . E 5 HOH A 79 379 123 HOH HOH . E 5 HOH A 80 380 86 HOH HOH . E 5 HOH A 81 381 136 HOH HOH . E 5 HOH A 82 382 91 HOH HOH . E 5 HOH A 83 383 90 HOH HOH . E 5 HOH A 84 384 11 HOH HOH . E 5 HOH A 85 385 19 HOH HOH . E 5 HOH A 86 386 36 HOH HOH . E 5 HOH A 87 387 34 HOH HOH . E 5 HOH A 88 388 84 HOH HOH . E 5 HOH A 89 389 134 HOH HOH . E 5 HOH A 90 390 8 HOH HOH . E 5 HOH A 91 391 17 HOH HOH . E 5 HOH A 92 392 29 HOH HOH . E 5 HOH A 93 393 61 HOH HOH . E 5 HOH A 94 394 114 HOH HOH . E 5 HOH A 95 395 151 HOH HOH . E 5 HOH A 96 396 35 HOH HOH . E 5 HOH A 97 397 127 HOH HOH . E 5 HOH A 98 398 141 HOH HOH . E 5 HOH A 99 399 146 HOH HOH . E 5 HOH A 100 400 109 HOH HOH . E 5 HOH A 101 401 144 HOH HOH . E 5 HOH A 102 402 122 HOH HOH . E 5 HOH A 103 403 60 HOH HOH . E 5 HOH A 104 404 56 HOH HOH . E 5 HOH A 105 405 6 HOH HOH . E 5 HOH A 106 406 67 HOH HOH . E 5 HOH A 107 407 94 HOH HOH . E 5 HOH A 108 408 69 HOH HOH . E 5 HOH A 109 409 148 HOH HOH . E 5 HOH A 110 410 129 HOH HOH . E 5 HOH A 111 411 101 HOH HOH . E 5 HOH A 112 412 135 HOH HOH . E 5 HOH A 113 413 42 HOH HOH . E 5 HOH A 114 414 132 HOH HOH . E 5 HOH A 115 415 153 HOH HOH . E 5 HOH A 116 416 89 HOH HOH . E 5 HOH A 117 417 44 HOH HOH . E 5 HOH A 118 418 22 HOH HOH . E 5 HOH A 119 419 7 HOH HOH . E 5 HOH A 120 420 137 HOH HOH . E 5 HOH A 121 421 85 HOH HOH . E 5 HOH A 122 422 140 HOH HOH . E 5 HOH A 123 423 131 HOH HOH . E 5 HOH A 124 424 71 HOH HOH . E 5 HOH A 125 425 157 HOH HOH . E 5 HOH A 126 426 57 HOH HOH . E 5 HOH A 127 427 152 HOH HOH . E 5 HOH A 128 428 98 HOH HOH . E 5 HOH A 129 429 154 HOH HOH . E 5 HOH A 130 430 111 HOH HOH . E 5 HOH A 131 431 48 HOH HOH . E 5 HOH A 132 432 78 HOH HOH . E 5 HOH A 133 433 125 HOH HOH . E 5 HOH A 134 434 155 HOH HOH . E 5 HOH A 135 435 3 HOH HOH . E 5 HOH A 136 436 54 HOH HOH . E 5 HOH A 137 437 37 HOH HOH . E 5 HOH A 138 438 76 HOH HOH . E 5 HOH A 139 439 82 HOH HOH . E 5 HOH A 140 440 66 HOH HOH . E 5 HOH A 141 441 3 HOH HOH . E 5 HOH A 142 442 80 HOH HOH . E 5 HOH A 143 443 65 HOH HOH . E 5 HOH A 144 444 51 HOH HOH . E 5 HOH A 145 445 115 HOH HOH . E 5 HOH A 146 446 142 HOH HOH . E 5 HOH A 147 447 95 HOH HOH . E 5 HOH A 148 448 97 HOH HOH . E 5 HOH A 149 449 102 HOH HOH . E 5 HOH A 150 450 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 3 -10.692 -6.773 2.797 0.78 36.3 ? C1 PEG 202 A 1 HETATM 2 O O1 PEG . . . C 3 -10.109 -7.803 3.588 0.78 42.51 ? O1 PEG 202 A 1 HETATM 3 C C2 PEG . . . C 3 -9.628 -5.711 2.417 0.78 31.78 ? C2 PEG 202 A 1 HETATM 4 O O2 PEG . . . C 3 -10.126 -4.795 1.424 0.78 33.29 ? O2 PEG 202 A 1 HETATM 5 C C3 PEG . . . C 3 -10.266 -5.329 0.087 0.78 20.1 ? C3 PEG 202 A 1 HETATM 6 C C4 PEG . . . C 3 -8.986 -6.035 -0.347 0.78 37.7 ? C4 PEG 202 A 1 HETATM 7 O O4 PEG . . . C 3 -8.171 -5.122 -1.056 0.78 24.46 ? O4 PEG 202 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #