data_5U3I # _model_server_result.job_id 09tsGImOASTQ7Lxmgn8g2A _model_server_result.datetime_utc '2025-03-05 22:21:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u3i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 5U3I # _exptl.entry_id 5U3I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U3I _cell.length_a 57.385 _cell.length_b 59.04 _cell.length_c 172.637 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U3I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N ? 4 K N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 E FE HEM . A HEM 201 1_555 F O CMO . A CMO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc3 B NE2 HIS 92 B HIS 92 1_555 H FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc4 C NE2 HIS 87 C HIS 87 1_555 J FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc5 J FE HEM . C HEM 201 1_555 K O CMO . C CMO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc6 D NE2 HIS 92 D HIS 92 1_555 L FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc7 L FE HEM . D HEM 201 1_555 M O CMO . D CMO 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 118 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 5U3I _atom_sites.fract_transf_matrix[1][1] 0.017426 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016938 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 201 142 HEM HEM . F 4 CMO A 1 202 143 CMO CMO . G 5 7SJ A 1 203 1 7SJ GBT . H 3 HEM B 1 201 147 HEM HEM . I 4 CMO B 1 202 148 CMO CMO . J 3 HEM C 1 201 142 HEM HEM . K 4 CMO C 1 202 143 CMO CMO . L 3 HEM D 1 201 147 HEM HEM . M 4 CMO D 1 202 148 CMO CMO . N 6 HOH A 1 301 17 HOH HOH . N 6 HOH A 2 302 3 HOH HOH . N 6 HOH A 3 303 16 HOH HOH . N 6 HOH A 4 304 34 HOH HOH . N 6 HOH A 5 305 14 HOH HOH . N 6 HOH A 6 306 10 HOH HOH . N 6 HOH A 7 307 37 HOH HOH . N 6 HOH A 8 308 46 HOH HOH . N 6 HOH A 9 309 18 HOH HOH . N 6 HOH A 10 310 35 HOH HOH . N 6 HOH A 11 311 15 HOH HOH . N 6 HOH A 12 312 49 HOH HOH . O 6 HOH B 1 301 52 HOH HOH . O 6 HOH B 2 302 13 HOH HOH . O 6 HOH B 3 303 36 HOH HOH . O 6 HOH B 4 304 11 HOH HOH . O 6 HOH B 5 305 50 HOH HOH . O 6 HOH B 6 306 51 HOH HOH . O 6 HOH B 7 307 12 HOH HOH . O 6 HOH B 8 308 38 HOH HOH . P 6 HOH C 1 301 32 HOH HOH . P 6 HOH C 2 302 41 HOH HOH . P 6 HOH C 3 303 31 HOH HOH . P 6 HOH C 4 304 25 HOH HOH . P 6 HOH C 5 305 42 HOH HOH . P 6 HOH C 6 306 29 HOH HOH . P 6 HOH C 7 307 28 HOH HOH . P 6 HOH C 8 308 5 HOH HOH . P 6 HOH C 9 309 30 HOH HOH . P 6 HOH C 10 310 23 HOH HOH . P 6 HOH C 11 311 20 HOH HOH . P 6 HOH C 12 312 24 HOH HOH . P 6 HOH C 13 313 21 HOH HOH . P 6 HOH C 14 314 9 HOH HOH . P 6 HOH C 15 315 1 HOH HOH . P 6 HOH C 16 316 54 HOH HOH . P 6 HOH C 17 317 6 HOH HOH . P 6 HOH C 18 318 48 HOH HOH . P 6 HOH C 19 319 53 HOH HOH . P 6 HOH C 20 320 4 HOH HOH . P 6 HOH C 21 321 2 HOH HOH . P 6 HOH C 22 322 47 HOH HOH . Q 6 HOH D 1 301 22 HOH HOH . Q 6 HOH D 2 302 55 HOH HOH . Q 6 HOH D 3 303 33 HOH HOH . Q 6 HOH D 4 304 7 HOH HOH . Q 6 HOH D 5 305 8 HOH HOH . Q 6 HOH D 6 306 19 HOH HOH . Q 6 HOH D 7 307 39 HOH HOH . Q 6 HOH D 8 308 40 HOH HOH . Q 6 HOH D 9 309 26 HOH HOH . Q 6 HOH D 10 310 45 HOH HOH . Q 6 HOH D 11 311 27 HOH HOH . Q 6 HOH D 12 312 44 HOH HOH . Q 6 HOH D 13 313 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . I 4 21.301 17.512 -21.248 1 166.43 ? C CMO 202 B 1 HETATM 2 O O CMO . . . I 4 22.416 17.005 -21.427 1 168.41 ? O CMO 202 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #