data_5U3Y # _model_server_result.job_id 6GUM-GgzA9PZGLe5f88sQw _model_server_result.datetime_utc '2024-11-27 18:04:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u3y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 5U3Y # _exptl.entry_id 5U3Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 447.523 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-[2-({cyclopropyl[4-(furan-2-yl)benzene-1-carbonyl]amino}methyl)phenoxy]hexanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.53 _cell.angle_gamma 90 _cell.entry_id 5U3Y _cell.length_a 39.44 _cell.length_b 94.94 _cell.length_c 96.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U3Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,P 1 1 B,J,K,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 J N N # _chem_comp.formula 'C27 H29 N O5' _chem_comp.formula_weight 447.523 _chem_comp.id 7U7 _chem_comp.mon_nstd_flag . _chem_comp.name '6-[2-({cyclopropyl[4-(furan-2-yl)benzene-1-carbonyl]amino}methyl)phenoxy]hexanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C12 7U7 doub 1 n n O1 C12 7U7 sing 2 n n C12 C11 7U7 sing 3 n n C22 C23 7U7 sing 4 n n C22 C13 7U7 sing 5 n n C2 C1 7U7 doub 6 n y C2 C3 7U7 sing 7 n y C23 C13 7U7 sing 8 n n C1 C 7U7 sing 9 n y C11 C10 7U7 sing 10 n n C13 N 7U7 sing 11 n n C9 C10 7U7 sing 12 n n C9 C8 7U7 sing 13 n n C7 O 7U7 sing 14 n n C7 C8 7U7 sing 15 n n C3 C4 7U7 doub 16 n y C O 7U7 sing 17 n n C C5 7U7 doub 18 n y C4 C5 7U7 sing 19 n y C5 C6 7U7 sing 20 n n N C6 7U7 sing 21 n n N C14 7U7 sing 22 n n O3 C14 7U7 doub 23 n n C14 C15 7U7 sing 24 n n C15 C16 7U7 doub 25 n y C15 C17 7U7 sing 26 n y C16 C20 7U7 sing 27 n y C17 C18 7U7 doub 28 n y C20 C19 7U7 doub 29 n y C18 C19 7U7 sing 30 n y C19 C21 7U7 sing 31 n n C21 O4 7U7 sing 32 n y C21 C24 7U7 doub 33 n y O4 C26 7U7 sing 34 n y C24 C25 7U7 sing 35 n y C26 C25 7U7 doub 36 n y C4 H3 7U7 sing 37 n n C6 H4 7U7 sing 38 n n C6 H5 7U7 sing 39 n n C7 H6 7U7 sing 40 n n C7 H7 7U7 sing 41 n n C8 H8 7U7 sing 42 n n C8 H9 7U7 sing 43 n n C10 H12 7U7 sing 44 n n C10 H13 7U7 sing 45 n n C13 H16 7U7 sing 46 n n C17 H18 7U7 sing 47 n n C20 H20 7U7 sing 48 n n C22 H21 7U7 sing 49 n n C22 H22 7U7 sing 50 n n C24 H25 7U7 sing 51 n n C26 H27 7U7 sing 52 n n C1 H 7U7 sing 53 n n O1 H28 7U7 sing 54 n n C2 H1 7U7 sing 55 n n C3 H2 7U7 sing 56 n n C9 H10 7U7 sing 57 n n C9 H11 7U7 sing 58 n n C11 H15 7U7 sing 59 n n C11 H14 7U7 sing 60 n n C16 H17 7U7 sing 61 n n C18 H19 7U7 sing 62 n n C23 H23 7U7 sing 63 n n C23 H24 7U7 sing 64 n n C25 H26 7U7 sing 65 n n # _atom_sites.entry_id 5U3Y _atom_sites.fract_transf_matrix[1][1] 0.025355 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003352 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B7G A 1 501 464 B7G B7G . D 3 7U7 A 1 502 465 7U7 LIG . E 4 PGO A 1 503 466 PGO PGO . F 4 PGO A 1 504 467 PGO PGO . G 5 PEG A 1 505 468 PEG PEG . H 5 PEG A 1 506 469 PEG PEG . I 2 B7G A 1 507 464 B7G B7G . J 3 7U7 B 1 501 465 7U7 LIG . K 4 PGO B 1 502 466 PGO PGO . L 5 PEG B 1 503 468 PEG PEG . M 5 PEG B 1 504 469 PEG PEG . N 5 PEG B 1 505 467 PEG PEG . O 5 PEG B 1 506 471 PEG PEG . P 6 HOH A 1 601 33 HOH HOH . P 6 HOH A 2 602 17 HOH HOH . P 6 HOH A 3 603 1 HOH HOH . P 6 HOH A 4 604 27 HOH HOH . P 6 HOH A 5 605 48 HOH HOH . P 6 HOH A 6 606 57 HOH HOH . P 6 HOH A 7 607 32 HOH HOH . P 6 HOH A 8 608 4 HOH HOH . P 6 HOH A 9 609 123 HOH HOH . P 6 HOH A 10 610 77 HOH HOH . P 6 HOH A 11 611 7 HOH HOH . P 6 HOH A 12 612 9 HOH HOH . P 6 HOH A 13 613 120 HOH HOH . P 6 HOH A 14 614 12 HOH HOH . P 6 HOH A 15 615 37 HOH HOH . P 6 HOH A 16 616 40 HOH HOH . P 6 HOH A 17 617 47 HOH HOH . P 6 HOH A 18 618 56 HOH HOH . P 6 HOH A 19 619 112 HOH HOH . P 6 HOH A 20 620 14 HOH HOH . P 6 HOH A 21 621 118 HOH HOH . P 6 HOH A 22 622 13 HOH HOH . P 6 HOH A 23 623 52 HOH HOH . P 6 HOH A 24 624 126 HOH HOH . P 6 HOH A 25 625 10 HOH HOH . P 6 HOH A 26 626 8 HOH HOH . P 6 HOH A 27 627 71 HOH HOH . P 6 HOH A 28 628 95 HOH HOH . P 6 HOH A 29 629 50 HOH HOH . P 6 HOH A 30 630 74 HOH HOH . P 6 HOH A 31 631 46 HOH HOH . P 6 HOH A 32 632 21 HOH HOH . P 6 HOH A 33 633 78 HOH HOH . P 6 HOH A 34 634 108 HOH HOH . P 6 HOH A 35 635 28 HOH HOH . P 6 HOH A 36 636 62 HOH HOH . P 6 HOH A 37 637 106 HOH HOH . P 6 HOH A 38 638 105 HOH HOH . P 6 HOH A 39 639 34 HOH HOH . P 6 HOH A 40 640 89 HOH HOH . P 6 HOH A 41 641 125 HOH HOH . P 6 HOH A 42 642 109 HOH HOH . P 6 HOH A 43 643 88 HOH HOH . P 6 HOH A 44 644 24 HOH HOH . P 6 HOH A 45 645 114 HOH HOH . P 6 HOH A 46 646 35 HOH HOH . P 6 HOH A 47 647 72 HOH HOH . P 6 HOH A 48 648 39 HOH HOH . P 6 HOH A 49 649 84 HOH HOH . P 6 HOH A 50 650 76 HOH HOH . P 6 HOH A 51 651 121 HOH HOH . P 6 HOH A 52 652 44 HOH HOH . P 6 HOH A 53 653 83 HOH HOH . P 6 HOH A 54 654 55 HOH HOH . P 6 HOH A 55 655 59 HOH HOH . P 6 HOH A 56 656 68 HOH HOH . P 6 HOH A 57 657 29 HOH HOH . P 6 HOH A 58 658 107 HOH HOH . P 6 HOH A 59 659 110 HOH HOH . Q 6 HOH B 1 601 26 HOH HOH . Q 6 HOH B 2 602 3 HOH HOH . Q 6 HOH B 3 603 119 HOH HOH . Q 6 HOH B 4 604 49 HOH HOH . Q 6 HOH B 5 605 11 HOH HOH . Q 6 HOH B 6 606 67 HOH HOH . Q 6 HOH B 7 607 122 HOH HOH . Q 6 HOH B 8 608 80 HOH HOH . Q 6 HOH B 9 609 87 HOH HOH . Q 6 HOH B 10 610 70 HOH HOH . Q 6 HOH B 11 611 82 HOH HOH . Q 6 HOH B 12 612 92 HOH HOH . Q 6 HOH B 13 613 15 HOH HOH . Q 6 HOH B 14 614 6 HOH HOH . Q 6 HOH B 15 615 91 HOH HOH . Q 6 HOH B 16 616 85 HOH HOH . Q 6 HOH B 17 617 100 HOH HOH . Q 6 HOH B 18 618 20 HOH HOH . Q 6 HOH B 19 619 73 HOH HOH . Q 6 HOH B 20 620 36 HOH HOH . Q 6 HOH B 21 621 22 HOH HOH . Q 6 HOH B 22 622 30 HOH HOH . Q 6 HOH B 23 623 53 HOH HOH . Q 6 HOH B 24 624 102 HOH HOH . Q 6 HOH B 25 625 69 HOH HOH . Q 6 HOH B 26 626 103 HOH HOH . Q 6 HOH B 27 627 116 HOH HOH . Q 6 HOH B 28 628 60 HOH HOH . Q 6 HOH B 29 629 18 HOH HOH . Q 6 HOH B 30 630 63 HOH HOH . Q 6 HOH B 31 631 101 HOH HOH . Q 6 HOH B 32 632 41 HOH HOH . Q 6 HOH B 33 633 31 HOH HOH . Q 6 HOH B 34 634 45 HOH HOH . Q 6 HOH B 35 635 99 HOH HOH . Q 6 HOH B 36 636 38 HOH HOH . Q 6 HOH B 37 637 96 HOH HOH . Q 6 HOH B 38 638 16 HOH HOH . Q 6 HOH B 39 639 117 HOH HOH . Q 6 HOH B 40 640 43 HOH HOH . Q 6 HOH B 41 641 64 HOH HOH . Q 6 HOH B 42 642 94 HOH HOH . Q 6 HOH B 43 643 90 HOH HOH . Q 6 HOH B 44 644 81 HOH HOH . Q 6 HOH B 45 645 93 HOH HOH . Q 6 HOH B 46 646 124 HOH HOH . Q 6 HOH B 47 647 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 7U7 . . . D 3 -17.203 1.599 131.553 1 12.06 ? C4 7U7 502 A 1 HETATM 2 C C5 7U7 . . . D 3 -17.918 2.787 131.693 1 15.49 ? C5 7U7 502 A 1 HETATM 3 C C6 7U7 . . . D 3 -17.29 4.015 132.313 1 18.82 ? C6 7U7 502 A 1 HETATM 4 C C7 7U7 . . . D 3 -21.232 4.233 130.963 1 28.08 ? C7 7U7 502 A 1 HETATM 5 C C8 7U7 . . . D 3 -21.787 5.548 131.483 1 31.08 ? C8 7U7 502 A 1 HETATM 6 C C10 7U7 . . . D 3 -21.909 7.982 131.042 1 32.68 ? C10 7U7 502 A 1 HETATM 7 C C13 7U7 . . . D 3 -15.248 4.069 130.915 1 22.7 ? C13 7U7 502 A 1 HETATM 8 C C15 7U7 . . . D 3 -15.428 3.402 134.665 1 15.35 ? C15 7U7 502 A 1 HETATM 9 C C17 7U7 . . . D 3 -14.893 4.12 135.725 1 20.37 ? C17 7U7 502 A 1 HETATM 10 C C20 7U7 . . . D 3 -16.694 2.073 136.228 1 17.89 ? C20 7U7 502 A 1 HETATM 11 C C21 7U7 . . . D 3 -16.562 2.458 138.682 1 12.83 ? C21 7U7 502 A 1 HETATM 12 C C22 7U7 . . . D 3 -16.078 4.562 129.729 1 22.91 ? C22 7U7 502 A 1 HETATM 13 C C24 7U7 . . . D 3 -16.188 3.125 139.837 1 12.82 ? C24 7U7 502 A 1 HETATM 14 C C26 7U7 . . . D 3 -17.464 1.394 140.42 1 28.85 ? C26 7U7 502 A 1 HETATM 15 N N 7U7 . . . D 3 -15.835 3.932 132.254 1 16.74 ? N 7U7 502 A 1 HETATM 16 C C 7U7 . . . D 3 -19.231 2.86 131.263 1 14.99 ? C 7U7 502 A 1 HETATM 17 O O 7U7 . . . D 3 -19.896 4.049 131.42 1 19.72 ? O 7U7 502 A 1 HETATM 18 C C1 7U7 . . . D 3 -19.835 1.743 130.69 1 14.86 ? C1 7U7 502 A 1 HETATM 19 O O1 7U7 . . . D 3 -20.005 10.183 128.901 1 29.31 ? O1 7U7 502 A 1 HETATM 20 C C2 7U7 . . . D 3 -19.123 0.563 130.554 1 13.56 ? C2 7U7 502 A 1 HETATM 21 O O2 7U7 . . . D 3 -21.854 9.079 128.491 1 18.37 ? O2 7U7 502 A 1 HETATM 22 C C3 7U7 . . . D 3 -17.808 0.486 130.986 1 20.64 ? C3 7U7 502 A 1 HETATM 23 O O3 7U7 . . . D 3 -13.785 3.809 133.079 1 19.03 ? O3 7U7 502 A 1 HETATM 24 O O4 7U7 . . . D 3 -17.337 1.389 139.044 1 24.3 ? O4 7U7 502 A 1 HETATM 25 C C9 7U7 . . . D 3 -21.017 6.751 130.955 1 28.21 ? C9 7U7 502 A 1 HETATM 26 C C11 7U7 . . . D 3 -21.149 9.273 130.765 1 26.13 ? C11 7U7 502 A 1 HETATM 27 C C12 7U7 . . . D 3 -20.993 9.521 129.281 1 28.83 ? C12 7U7 502 A 1 HETATM 28 C C14 7U7 . . . D 3 -14.988 3.735 133.266 1 14.49 ? C14 7U7 502 A 1 HETATM 29 C C16 7U7 . . . D 3 -16.322 2.369 134.923 1 15.57 ? C16 7U7 502 A 1 HETATM 30 C C18 7U7 . . . D 3 -15.261 3.825 137.032 1 22.86 ? C18 7U7 502 A 1 HETATM 31 C C19 7U7 . . . D 3 -16.168 2.802 137.286 1 16.44 ? C19 7U7 502 A 1 HETATM 32 C C23 7U7 . . . D 3 -15.277 5.553 130.562 1 18.85 ? C23 7U7 502 A 1 HETATM 33 C C25 7U7 . . . D 3 -16.751 2.467 140.911 1 17.83 ? C25 7U7 502 A 1 HETATM 34 H H3 7U7 . . . D 3 -16.176 1.542 131.893 1 14.47 ? H3 7U7 502 A 1 HETATM 35 H H4 7U7 . . . D 3 -17.609 4.103 133.354 1 22.58 ? H4 7U7 502 A 1 HETATM 36 H H5 7U7 . . . D 3 -17.627 4.907 131.781 1 22.58 ? H5 7U7 502 A 1 HETATM 37 H H6 7U7 . . . D 3 -21.856 3.407 131.312 1 33.7 ? H6 7U7 502 A 1 HETATM 38 H H7 7U7 . . . D 3 -21.249 4.233 129.871 1 33.7 ? H7 7U7 502 A 1 HETATM 39 H H8 7U7 . . . D 3 -22.836 5.636 131.189 1 37.3 ? H8 7U7 502 A 1 HETATM 40 H H9 7U7 . . . D 3 -21.749 5.548 132.574 1 37.3 ? H9 7U7 502 A 1 HETATM 41 H H12 7U7 . . . D 3 -22.725 7.886 130.324 1 39.22 ? H12 7U7 502 A 1 HETATM 42 H H13 7U7 . . . D 3 -22.351 8.034 132.039 1 39.22 ? H13 7U7 502 A 1 HETATM 43 H H16 7U7 . . . D 3 -14.258 3.641 130.704 1 27.24 ? H16 7U7 502 A 1 HETATM 44 H H18 7U7 . . . D 3 -14.188 4.92 135.532 1 24.44 ? H18 7U7 502 A 1 HETATM 45 H H20 7U7 . . . D 3 -17.396 1.271 136.421 1 21.46 ? H20 7U7 502 A 1 HETATM 46 H H21 7U7 . . . D 3 -15.68 4.336 128.737 1 27.5 ? H21 7U7 502 A 1 HETATM 47 H H22 7U7 . . . D 3 -17.16 4.578 129.873 1 27.5 ? H22 7U7 502 A 1 HETATM 48 H H25 7U7 . . . D 3 -15.568 4.012 139.887 1 15.38 ? H25 7U7 502 A 1 HETATM 49 H H27 7U7 . . . D 3 -18.025 0.679 141.009 1 34.62 ? H27 7U7 502 A 1 HETATM 50 H H 7U7 . . . D 3 -20.863 1.797 130.353 1 17.83 ? H 7U7 502 A 1 HETATM 51 H H1 7U7 . . . D 3 -19.595 -0.304 130.108 1 16.27 ? H1 7U7 502 A 1 HETATM 52 H H2 7U7 . . . D 3 -17.253 -0.437 130.876 1 24.77 ? H2 7U7 502 A 1 HETATM 53 H H10 7U7 . . . D 3 -20.113 6.903 131.547 1 33.85 ? H10 7U7 502 A 1 HETATM 54 H H11 7U7 . . . D 3 -20.723 6.578 129.917 1 33.85 ? H11 7U7 502 A 1 HETATM 55 H H15 7U7 . . . D 3 -21.682 10.111 131.218 1 31.36 ? H15 7U7 502 A 1 HETATM 56 H H14 7U7 . . . D 3 -20.161 9.217 131.228 1 31.36 ? H14 7U7 502 A 1 HETATM 57 H H17 7U7 . . . D 3 -16.739 1.799 134.101 1 18.68 ? H17 7U7 502 A 1 HETATM 58 H H19 7U7 . . . D 3 -14.843 4.394 137.853 1 27.43 ? H19 7U7 502 A 1 HETATM 59 H H23 7U7 . . . D 3 -15.854 6.195 131.231 1 22.62 ? H23 7U7 502 A 1 HETATM 60 H H24 7U7 . . . D 3 -14.374 5.953 130.095 1 22.62 ? H24 7U7 502 A 1 HETATM 61 H H26 7U7 . . . D 3 -16.656 2.747 141.953 1 21.4 ? H26 7U7 502 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 61 #