data_5U43 # _model_server_result.job_id R4om8_07dY_5ICx7QsDr0w _model_server_result.datetime_utc '2024-11-27 18:15:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":504}' # _entry.id 5U43 # _exptl.entry_id 5U43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.6 _cell.angle_gamma 90 _cell.entry_id 5U43 _cell.length_a 39.64 _cell.length_b 95.01 _cell.length_c 96.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 L N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 354 n n C1 C2 PEG sing 355 n n C1 H11 PEG sing 356 n n C1 H12 PEG sing 357 n n O1 HO1 PEG sing 358 n n C2 O2 PEG sing 359 n n C2 H21 PEG sing 360 n n C2 H22 PEG sing 361 n n O2 C3 PEG sing 362 n n C3 C4 PEG sing 363 n n C3 H31 PEG sing 364 n n C3 H32 PEG sing 365 n n C4 O4 PEG sing 366 n n C4 H41 PEG sing 367 n n C4 H42 PEG sing 368 n n O4 HO4 PEG sing 369 n n # _atom_sites.entry_id 5U43 _atom_sites.fract_transf_matrix[1][1] 0.025227 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003366 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010525 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010474 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7SS A 1 501 443 7SS LIG . D 3 PGO A 1 502 444 PGO PGO . E 4 PEG A 1 503 445 PEG PEG . F 4 PEG A 1 504 446 PEG PEG . G 5 B7G A 1 505 447 B7G B7G . H 5 B7G A 1 506 442 B7G B7G . I 5 B7G B 1 501 442 B7G B7G . J 2 7SS B 1 502 443 7SS LIG . K 3 PGO B 1 503 444 PGO PGO . L 4 PEG B 1 504 445 PEG PEG . M 3 PGO B 1 505 446 PGO PGO . N 6 HOH A 1 601 275 HOH HOH . N 6 HOH A 2 602 61 HOH HOH . N 6 HOH A 3 603 97 HOH HOH . N 6 HOH A 4 604 90 HOH HOH . N 6 HOH A 5 605 66 HOH HOH . N 6 HOH A 6 606 43 HOH HOH . N 6 HOH A 7 607 271 HOH HOH . N 6 HOH A 8 608 259 HOH HOH . N 6 HOH A 9 609 112 HOH HOH . N 6 HOH A 10 610 77 HOH HOH . N 6 HOH A 11 611 234 HOH HOH . N 6 HOH A 12 612 27 HOH HOH . N 6 HOH A 13 613 72 HOH HOH . N 6 HOH A 14 614 17 HOH HOH . N 6 HOH A 15 615 183 HOH HOH . N 6 HOH A 16 616 145 HOH HOH . N 6 HOH A 17 617 53 HOH HOH . N 6 HOH A 18 618 189 HOH HOH . N 6 HOH A 19 619 63 HOH HOH . N 6 HOH A 20 620 170 HOH HOH . N 6 HOH A 21 621 243 HOH HOH . N 6 HOH A 22 622 40 HOH HOH . N 6 HOH A 23 623 264 HOH HOH . N 6 HOH A 24 624 8 HOH HOH . N 6 HOH A 25 625 15 HOH HOH . N 6 HOH A 26 626 255 HOH HOH . N 6 HOH A 27 627 24 HOH HOH . N 6 HOH A 28 628 28 HOH HOH . N 6 HOH A 29 629 106 HOH HOH . N 6 HOH A 30 630 171 HOH HOH . N 6 HOH A 31 631 29 HOH HOH . N 6 HOH A 32 632 14 HOH HOH . N 6 HOH A 33 633 216 HOH HOH . N 6 HOH A 34 634 204 HOH HOH . N 6 HOH A 35 635 4 HOH HOH . N 6 HOH A 36 636 126 HOH HOH . N 6 HOH A 37 637 133 HOH HOH . N 6 HOH A 38 638 220 HOH HOH . N 6 HOH A 39 639 32 HOH HOH . N 6 HOH A 40 640 206 HOH HOH . N 6 HOH A 41 641 114 HOH HOH . N 6 HOH A 42 642 75 HOH HOH . N 6 HOH A 43 643 20 HOH HOH . N 6 HOH A 44 644 118 HOH HOH . N 6 HOH A 45 645 30 HOH HOH . N 6 HOH A 46 646 268 HOH HOH . N 6 HOH A 47 647 3 HOH HOH . N 6 HOH A 48 648 282 HOH HOH . N 6 HOH A 49 649 241 HOH HOH . N 6 HOH A 50 650 54 HOH HOH . N 6 HOH A 51 651 7 HOH HOH . N 6 HOH A 52 652 49 HOH HOH . N 6 HOH A 53 653 237 HOH HOH . N 6 HOH A 54 654 214 HOH HOH . N 6 HOH A 55 655 180 HOH HOH . N 6 HOH A 56 656 64 HOH HOH . N 6 HOH A 57 657 101 HOH HOH . N 6 HOH A 58 658 21 HOH HOH . N 6 HOH A 59 659 257 HOH HOH . N 6 HOH A 60 660 13 HOH HOH . N 6 HOH A 61 661 110 HOH HOH . N 6 HOH A 62 662 141 HOH HOH . N 6 HOH A 63 663 136 HOH HOH . N 6 HOH A 64 664 215 HOH HOH . N 6 HOH A 65 665 130 HOH HOH . N 6 HOH A 66 666 42 HOH HOH . N 6 HOH A 67 667 172 HOH HOH . N 6 HOH A 68 668 98 HOH HOH . N 6 HOH A 69 669 313 HOH HOH . N 6 HOH A 70 670 124 HOH HOH . N 6 HOH A 71 671 127 HOH HOH . N 6 HOH A 72 672 132 HOH HOH . N 6 HOH A 73 673 44 HOH HOH . N 6 HOH A 74 674 125 HOH HOH . N 6 HOH A 75 675 209 HOH HOH . N 6 HOH A 76 676 91 HOH HOH . N 6 HOH A 77 677 69 HOH HOH . N 6 HOH A 78 678 79 HOH HOH . N 6 HOH A 79 679 92 HOH HOH . N 6 HOH A 80 680 107 HOH HOH . N 6 HOH A 81 681 26 HOH HOH . N 6 HOH A 82 682 103 HOH HOH . N 6 HOH A 83 683 113 HOH HOH . N 6 HOH A 84 684 224 HOH HOH . N 6 HOH A 85 685 221 HOH HOH . N 6 HOH A 86 686 120 HOH HOH . N 6 HOH A 87 687 82 HOH HOH . N 6 HOH A 88 688 48 HOH HOH . N 6 HOH A 89 689 10 HOH HOH . N 6 HOH A 90 690 102 HOH HOH . N 6 HOH A 91 691 108 HOH HOH . N 6 HOH A 92 692 205 HOH HOH . N 6 HOH A 93 693 22 HOH HOH . N 6 HOH A 94 694 76 HOH HOH . N 6 HOH A 95 695 252 HOH HOH . N 6 HOH A 96 696 167 HOH HOH . N 6 HOH A 97 697 34 HOH HOH . N 6 HOH A 98 698 334 HOH HOH . N 6 HOH A 99 699 84 HOH HOH . N 6 HOH A 100 700 302 HOH HOH . N 6 HOH A 101 701 154 HOH HOH . N 6 HOH A 102 702 11 HOH HOH . N 6 HOH A 103 703 5 HOH HOH . N 6 HOH A 104 704 281 HOH HOH . N 6 HOH A 105 705 36 HOH HOH . N 6 HOH A 106 706 60 HOH HOH . N 6 HOH A 107 707 182 HOH HOH . N 6 HOH A 108 708 223 HOH HOH . N 6 HOH A 109 709 38 HOH HOH . N 6 HOH A 110 710 18 HOH HOH . N 6 HOH A 111 711 46 HOH HOH . N 6 HOH A 112 712 267 HOH HOH . N 6 HOH A 113 713 58 HOH HOH . N 6 HOH A 114 714 193 HOH HOH . N 6 HOH A 115 715 152 HOH HOH . N 6 HOH A 116 716 51 HOH HOH . N 6 HOH A 117 717 174 HOH HOH . N 6 HOH A 118 718 67 HOH HOH . N 6 HOH A 119 719 74 HOH HOH . N 6 HOH A 120 720 331 HOH HOH . N 6 HOH A 121 721 89 HOH HOH . N 6 HOH A 122 722 168 HOH HOH . N 6 HOH A 123 723 332 HOH HOH . N 6 HOH A 124 724 295 HOH HOH . N 6 HOH A 125 725 307 HOH HOH . N 6 HOH A 126 726 333 HOH HOH . N 6 HOH A 127 727 217 HOH HOH . N 6 HOH A 128 728 175 HOH HOH . N 6 HOH A 129 729 1 HOH HOH . N 6 HOH A 130 730 293 HOH HOH . N 6 HOH A 131 731 177 HOH HOH . N 6 HOH A 132 732 100 HOH HOH . N 6 HOH A 133 733 298 HOH HOH . N 6 HOH A 134 734 155 HOH HOH . N 6 HOH A 135 735 294 HOH HOH . N 6 HOH A 136 736 242 HOH HOH . N 6 HOH A 137 737 200 HOH HOH . N 6 HOH A 138 738 337 HOH HOH . N 6 HOH A 139 739 104 HOH HOH . N 6 HOH A 140 740 246 HOH HOH . N 6 HOH A 141 741 115 HOH HOH . N 6 HOH A 142 742 219 HOH HOH . N 6 HOH A 143 743 164 HOH HOH . N 6 HOH A 144 744 129 HOH HOH . N 6 HOH A 145 745 250 HOH HOH . N 6 HOH A 146 746 78 HOH HOH . N 6 HOH A 147 747 285 HOH HOH . N 6 HOH A 148 748 287 HOH HOH . N 6 HOH A 149 749 303 HOH HOH . N 6 HOH A 150 750 289 HOH HOH . N 6 HOH A 151 751 121 HOH HOH . N 6 HOH A 152 752 283 HOH HOH . N 6 HOH A 153 753 142 HOH HOH . N 6 HOH A 154 754 80 HOH HOH . N 6 HOH A 155 755 196 HOH HOH . N 6 HOH A 156 756 163 HOH HOH . N 6 HOH A 157 757 297 HOH HOH . N 6 HOH A 158 758 160 HOH HOH . N 6 HOH A 159 759 213 HOH HOH . N 6 HOH A 160 760 202 HOH HOH . N 6 HOH A 161 761 240 HOH HOH . N 6 HOH A 162 762 137 HOH HOH . N 6 HOH A 163 763 199 HOH HOH . O 6 HOH B 1 601 173 HOH HOH . O 6 HOH B 2 602 210 HOH HOH . O 6 HOH B 3 603 143 HOH HOH . O 6 HOH B 4 604 235 HOH HOH . O 6 HOH B 5 605 94 HOH HOH . O 6 HOH B 6 606 288 HOH HOH . O 6 HOH B 7 607 37 HOH HOH . O 6 HOH B 8 608 329 HOH HOH . O 6 HOH B 9 609 95 HOH HOH . O 6 HOH B 10 610 256 HOH HOH . O 6 HOH B 11 611 59 HOH HOH . O 6 HOH B 12 612 57 HOH HOH . O 6 HOH B 13 613 73 HOH HOH . O 6 HOH B 14 614 229 HOH HOH . O 6 HOH B 15 615 248 HOH HOH . O 6 HOH B 16 616 68 HOH HOH . O 6 HOH B 17 617 2 HOH HOH . O 6 HOH B 18 618 308 HOH HOH . O 6 HOH B 19 619 45 HOH HOH . O 6 HOH B 20 620 123 HOH HOH . O 6 HOH B 21 621 156 HOH HOH . O 6 HOH B 22 622 316 HOH HOH . O 6 HOH B 23 623 144 HOH HOH . O 6 HOH B 24 624 16 HOH HOH . O 6 HOH B 25 625 9 HOH HOH . O 6 HOH B 26 626 158 HOH HOH . O 6 HOH B 27 627 276 HOH HOH . O 6 HOH B 28 628 324 HOH HOH . O 6 HOH B 29 629 304 HOH HOH . O 6 HOH B 30 630 315 HOH HOH . O 6 HOH B 31 631 25 HOH HOH . O 6 HOH B 32 632 169 HOH HOH . O 6 HOH B 33 633 62 HOH HOH . O 6 HOH B 34 634 310 HOH HOH . O 6 HOH B 35 635 81 HOH HOH . O 6 HOH B 36 636 292 HOH HOH . O 6 HOH B 37 637 138 HOH HOH . O 6 HOH B 38 638 278 HOH HOH . O 6 HOH B 39 639 300 HOH HOH . O 6 HOH B 40 640 12 HOH HOH . O 6 HOH B 41 641 286 HOH HOH . O 6 HOH B 42 642 33 HOH HOH . O 6 HOH B 43 643 96 HOH HOH . O 6 HOH B 44 644 165 HOH HOH . O 6 HOH B 45 645 176 HOH HOH . O 6 HOH B 46 646 150 HOH HOH . O 6 HOH B 47 647 207 HOH HOH . O 6 HOH B 48 648 35 HOH HOH . O 6 HOH B 49 649 87 HOH HOH . O 6 HOH B 50 650 147 HOH HOH . O 6 HOH B 51 651 39 HOH HOH . O 6 HOH B 52 652 23 HOH HOH . O 6 HOH B 53 653 232 HOH HOH . O 6 HOH B 54 654 55 HOH HOH . O 6 HOH B 55 655 109 HOH HOH . O 6 HOH B 56 656 178 HOH HOH . O 6 HOH B 57 657 157 HOH HOH . O 6 HOH B 58 658 31 HOH HOH . O 6 HOH B 59 659 262 HOH HOH . O 6 HOH B 60 660 309 HOH HOH . O 6 HOH B 61 661 83 HOH HOH . O 6 HOH B 62 662 249 HOH HOH . O 6 HOH B 63 663 119 HOH HOH . O 6 HOH B 64 664 56 HOH HOH . O 6 HOH B 65 665 86 HOH HOH . O 6 HOH B 66 666 312 HOH HOH . O 6 HOH B 67 667 211 HOH HOH . O 6 HOH B 68 668 330 HOH HOH . O 6 HOH B 69 669 105 HOH HOH . O 6 HOH B 70 670 191 HOH HOH . O 6 HOH B 71 671 65 HOH HOH . O 6 HOH B 72 672 231 HOH HOH . O 6 HOH B 73 673 181 HOH HOH . O 6 HOH B 74 674 47 HOH HOH . O 6 HOH B 75 675 131 HOH HOH . O 6 HOH B 76 676 139 HOH HOH . O 6 HOH B 77 677 314 HOH HOH . O 6 HOH B 78 678 111 HOH HOH . O 6 HOH B 79 679 50 HOH HOH . O 6 HOH B 80 680 317 HOH HOH . O 6 HOH B 81 681 321 HOH HOH . O 6 HOH B 82 682 128 HOH HOH . O 6 HOH B 83 683 149 HOH HOH . O 6 HOH B 84 684 322 HOH HOH . O 6 HOH B 85 685 134 HOH HOH . O 6 HOH B 86 686 311 HOH HOH . O 6 HOH B 87 687 225 HOH HOH . O 6 HOH B 88 688 70 HOH HOH . O 6 HOH B 89 689 85 HOH HOH . O 6 HOH B 90 690 226 HOH HOH . O 6 HOH B 91 691 6 HOH HOH . O 6 HOH B 92 692 320 HOH HOH . O 6 HOH B 93 693 253 HOH HOH . O 6 HOH B 94 694 146 HOH HOH . O 6 HOH B 95 695 328 HOH HOH . O 6 HOH B 96 696 261 HOH HOH . O 6 HOH B 97 697 135 HOH HOH . O 6 HOH B 98 698 284 HOH HOH . O 6 HOH B 99 699 41 HOH HOH . O 6 HOH B 100 700 116 HOH HOH . O 6 HOH B 101 701 263 HOH HOH . O 6 HOH B 102 702 277 HOH HOH . O 6 HOH B 103 703 239 HOH HOH . O 6 HOH B 104 704 305 HOH HOH . O 6 HOH B 105 705 266 HOH HOH . O 6 HOH B 106 706 290 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . L 4 -19.671 45.934 129.632 1 71.12 ? C1 PEG 504 B 1 HETATM 2 O O1 PEG . . . L 4 -18.885 46.788 130.433 1 70.27 ? O1 PEG 504 B 1 HETATM 3 C C2 PEG . . . L 4 -20.691 46.765 128.848 1 76.6 ? C2 PEG 504 B 1 HETATM 4 O O2 PEG . . . L 4 -21.717 45.93 128.319 1 87.55 ? O2 PEG 504 B 1 HETATM 5 C C3 PEG . . . L 4 -23.08 46.185 128.759 1 94.63 ? C3 PEG 504 B 1 HETATM 6 C C4 PEG . . . L 4 -24.015 45.89 127.68 1 81.51 ? C4 PEG 504 B 1 HETATM 7 O O4 PEG . . . L 4 -25.316 46.224 128.059 1 80.61 ? O4 PEG 504 B 1 HETATM 8 H H11 PEG . . . L 4 -20.143 45.292 130.203 1 85.34 ? H11 PEG 504 B 1 HETATM 9 H H12 PEG . . . L 4 -19.091 45.449 129.003 1 85.34 ? H12 PEG 504 B 1 HETATM 10 H HO1 PEG . . . L 4 -18.458 46.314 131.032 1 84.32 ? HO1 PEG 504 B 1 HETATM 11 H H21 PEG . . . L 4 -21.088 47.423 129.438 1 91.92 ? H21 PEG 504 B 1 HETATM 12 H H22 PEG . . . L 4 -20.239 47.221 128.116 1 91.92 ? H22 PEG 504 B 1 HETATM 13 H H31 PEG . . . L 4 -23.284 45.62 129.525 1 113.56 ? H31 PEG 504 B 1 HETATM 14 H H32 PEG . . . L 4 -23.168 47.119 129.015 1 113.56 ? H32 PEG 504 B 1 HETATM 15 H H41 PEG . . . L 4 -23.975 44.943 127.473 1 97.81 ? H41 PEG 504 B 1 HETATM 16 H H42 PEG . . . L 4 -23.771 46.397 126.899 1 97.81 ? H42 PEG 504 B 1 HETATM 17 H HO4 PEG . . . L 4 -25.831 46.115 127.409 1 96.73 ? HO4 PEG 504 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 17 #