data_5U44 # _model_server_result.job_id 7gDWFUPbthyDIsFzt6Kktw _model_server_result.datetime_utc '2024-11-11 08:40:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 5U44 # _exptl.entry_id 5U44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-1,2-PROPANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.65 _cell.angle_gamma 90 _cell.entry_id 5U44 _cell.length_a 39.57 _cell.length_b 95.41 _cell.length_c 96.18 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PGO _chem_comp.mon_nstd_flag . _chem_comp.name S-1,2-PROPANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGO sing 350 n n C1 O1 PGO sing 351 n n C1 H11 PGO sing 352 n n C1 H12 PGO sing 353 n n C2 C3 PGO sing 354 n n C2 O2 PGO sing 355 n n C2 H2 PGO sing 356 n n C3 H31 PGO sing 357 n n C3 H32 PGO sing 358 n n C3 H33 PGO sing 359 n n O1 HO1 PGO sing 360 n n O2 HO2 PGO sing 361 n n # _atom_sites.entry_id 5U44 _atom_sites.fract_transf_matrix[1][1] 0.025272 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003394 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010491 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B7G A 1 501 442 B7G B7G . D 3 PGO A 1 502 443 PGO PGO . E 3 PGO A 1 503 444 PGO PGO . F 4 7SV A 1 504 464 7SV LIG . G 2 B7G A 1 505 442 B7G B7G . H 3 PGO B 1 501 443 PGO PGO . I 4 7SV B 1 502 464 7SV LIG . J 5 HOH A 1 601 84 HOH HOH . J 5 HOH A 2 602 41 HOH HOH . J 5 HOH A 3 603 22 HOH HOH . J 5 HOH A 4 604 149 HOH HOH . J 5 HOH A 5 605 12 HOH HOH . J 5 HOH A 6 606 43 HOH HOH . J 5 HOH A 7 607 15 HOH HOH . J 5 HOH A 8 608 79 HOH HOH . J 5 HOH A 9 609 28 HOH HOH . J 5 HOH A 10 610 100 HOH HOH . J 5 HOH A 11 611 8 HOH HOH . J 5 HOH A 12 612 34 HOH HOH . J 5 HOH A 13 613 2 HOH HOH . J 5 HOH A 14 614 53 HOH HOH . J 5 HOH A 15 615 44 HOH HOH . J 5 HOH A 16 616 50 HOH HOH . J 5 HOH A 17 617 109 HOH HOH . J 5 HOH A 18 618 55 HOH HOH . J 5 HOH A 19 619 52 HOH HOH . J 5 HOH A 20 620 98 HOH HOH . J 5 HOH A 21 621 21 HOH HOH . J 5 HOH A 22 622 3 HOH HOH . J 5 HOH A 23 623 145 HOH HOH . J 5 HOH A 24 624 137 HOH HOH . J 5 HOH A 25 625 36 HOH HOH . J 5 HOH A 26 626 138 HOH HOH . J 5 HOH A 27 627 113 HOH HOH . J 5 HOH A 28 628 89 HOH HOH . J 5 HOH A 29 629 91 HOH HOH . J 5 HOH A 30 630 24 HOH HOH . J 5 HOH A 31 631 130 HOH HOH . J 5 HOH A 32 632 47 HOH HOH . J 5 HOH A 33 633 51 HOH HOH . J 5 HOH A 34 634 73 HOH HOH . J 5 HOH A 35 635 27 HOH HOH . J 5 HOH A 36 636 59 HOH HOH . J 5 HOH A 37 637 124 HOH HOH . J 5 HOH A 38 638 31 HOH HOH . J 5 HOH A 39 639 151 HOH HOH . J 5 HOH A 40 640 64 HOH HOH . J 5 HOH A 41 641 132 HOH HOH . K 5 HOH B 1 601 1 HOH HOH . K 5 HOH B 2 602 103 HOH HOH . K 5 HOH B 3 603 62 HOH HOH . K 5 HOH B 4 604 77 HOH HOH . K 5 HOH B 5 605 140 HOH HOH . K 5 HOH B 6 606 66 HOH HOH . K 5 HOH B 7 607 101 HOH HOH . K 5 HOH B 8 608 144 HOH HOH . K 5 HOH B 9 609 38 HOH HOH . K 5 HOH B 10 610 148 HOH HOH . K 5 HOH B 11 611 45 HOH HOH . K 5 HOH B 12 612 10 HOH HOH . K 5 HOH B 13 613 61 HOH HOH . K 5 HOH B 14 614 40 HOH HOH . K 5 HOH B 15 615 26 HOH HOH . K 5 HOH B 16 616 4 HOH HOH . K 5 HOH B 17 617 131 HOH HOH . K 5 HOH B 18 618 7 HOH HOH . K 5 HOH B 19 619 13 HOH HOH . K 5 HOH B 20 620 60 HOH HOH . K 5 HOH B 21 621 56 HOH HOH . K 5 HOH B 22 622 35 HOH HOH . K 5 HOH B 23 623 57 HOH HOH . K 5 HOH B 24 624 16 HOH HOH . K 5 HOH B 25 625 11 HOH HOH . K 5 HOH B 26 626 76 HOH HOH . K 5 HOH B 27 627 102 HOH HOH . K 5 HOH B 28 628 6 HOH HOH . K 5 HOH B 29 629 120 HOH HOH . K 5 HOH B 30 630 133 HOH HOH . K 5 HOH B 31 631 142 HOH HOH . K 5 HOH B 32 632 99 HOH HOH . K 5 HOH B 33 633 39 HOH HOH . K 5 HOH B 34 634 106 HOH HOH . K 5 HOH B 35 635 116 HOH HOH . K 5 HOH B 36 636 90 HOH HOH . K 5 HOH B 37 637 85 HOH HOH . K 5 HOH B 38 638 72 HOH HOH . K 5 HOH B 39 639 54 HOH HOH . K 5 HOH B 40 640 37 HOH HOH . K 5 HOH B 41 641 42 HOH HOH . K 5 HOH B 42 642 135 HOH HOH . K 5 HOH B 43 643 117 HOH HOH . K 5 HOH B 44 644 141 HOH HOH . K 5 HOH B 45 645 152 HOH HOH . K 5 HOH B 46 646 93 HOH HOH . K 5 HOH B 47 647 125 HOH HOH . K 5 HOH B 48 648 136 HOH HOH . K 5 HOH B 49 649 128 HOH HOH . K 5 HOH B 50 650 95 HOH HOH . K 5 HOH B 51 651 33 HOH HOH . K 5 HOH B 52 652 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGO . . . D 3 32.823 1.778 122.847 1 62.43 ? C1 PGO 502 A 1 HETATM 2 C C2 PGO . . . D 3 32.037 1.381 124.078 1 82.53 ? C2 PGO 502 A 1 HETATM 3 C C3 PGO . . . D 3 32.551 2.109 125.302 1 90.13 ? C3 PGO 502 A 1 HETATM 4 O O1 PGO . . . D 3 31.981 2.498 121.975 1 53.56 ? O1 PGO 502 A 1 HETATM 5 O O2 PGO . . . D 3 32.154 -0.008 124.28 1 83.96 ? O2 PGO 502 A 1 HETATM 6 H H11 PGO . . . D 3 33.151 0.977 122.397 1 74.92 ? H11 PGO 502 A 1 HETATM 7 H H12 PGO . . . D 3 33.578 2.338 123.109 1 74.92 ? H12 PGO 502 A 1 HETATM 8 H H2 PGO . . . D 3 31.097 1.607 123.943 1 99.04 ? H2 PGO 502 A 1 HETATM 9 H H31 PGO . . . D 3 33.52 2.206 125.239 1 108.16 ? H31 PGO 502 A 1 HETATM 10 H H32 PGO . . . D 3 32.327 1.597 126.102 1 108.16 ? H32 PGO 502 A 1 HETATM 11 H H33 PGO . . . D 3 32.138 2.991 125.353 1 108.16 ? H33 PGO 502 A 1 HETATM 12 H HO1 PGO . . . D 3 31.695 3.235 122.38 1 64.27 ? HO1 PGO 502 A 1 HETATM 13 H HO2 PGO . . . D 3 31.804 -0.438 123.587 1 100.75 ? HO2 PGO 502 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #