data_5U45 # _model_server_result.job_id ES-SWADF0Jni-JmD_hKNAg _model_server_result.datetime_utc '2024-11-05 03:59:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 5U45 # _exptl.entry_id 5U45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-1,2-PROPANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.56 _cell.angle_gamma 90 _cell.entry_id 5U45 _cell.length_a 39.53 _cell.length_b 95.26 _cell.length_c 96.44 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,N 1 1 B,G,H,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 K N N # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PGO _chem_comp.mon_nstd_flag . _chem_comp.name S-1,2-PROPANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGO sing 366 n n C1 O1 PGO sing 367 n n C1 H11 PGO sing 368 n n C1 H12 PGO sing 369 n n C2 C3 PGO sing 370 n n C2 O2 PGO sing 371 n n C2 H2 PGO sing 372 n n C3 H31 PGO sing 373 n n C3 H32 PGO sing 374 n n C3 H33 PGO sing 375 n n O1 HO1 PGO sing 376 n n O2 HO2 PGO sing 377 n n # _atom_sites.entry_id 5U45 _atom_sites.fract_transf_matrix[1][1] 0.025297 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003357 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B7G A 1 501 442 B7G B7G . D 3 7SY A 1 502 443 7SY LIG . E 4 PEG A 1 503 444 PEG PEG . F 5 PGO A 1 504 445 PGO PGO . G 2 B7G B 1 501 442 B7G B7G . H 3 7SY B 1 502 443 7SY LIG . I 4 PEG B 1 503 444 PEG PEG . J 2 B7G B 1 504 445 B7G B7G . K 5 PGO B 1 505 446 PGO PGO . L 4 PEG B 1 506 447 PEG PEG . M 4 PEG B 1 507 448 PEG PEG . N 6 HOH A 1 601 65 HOH HOH . N 6 HOH A 2 602 152 HOH HOH . N 6 HOH A 3 603 23 HOH HOH . N 6 HOH A 4 604 178 HOH HOH . N 6 HOH A 5 605 327 HOH HOH . N 6 HOH A 6 606 44 HOH HOH . N 6 HOH A 7 607 85 HOH HOH . N 6 HOH A 8 608 105 HOH HOH . N 6 HOH A 9 609 92 HOH HOH . N 6 HOH A 10 610 58 HOH HOH . N 6 HOH A 11 611 43 HOH HOH . N 6 HOH A 12 612 93 HOH HOH . N 6 HOH A 13 613 162 HOH HOH . N 6 HOH A 14 614 148 HOH HOH . N 6 HOH A 15 615 156 HOH HOH . N 6 HOH A 16 616 398 HOH HOH . N 6 HOH A 17 617 2 HOH HOH . N 6 HOH A 18 618 110 HOH HOH . N 6 HOH A 19 619 7 HOH HOH . N 6 HOH A 20 620 166 HOH HOH . N 6 HOH A 21 621 229 HOH HOH . N 6 HOH A 22 622 39 HOH HOH . N 6 HOH A 23 623 265 HOH HOH . N 6 HOH A 24 624 97 HOH HOH . N 6 HOH A 25 625 86 HOH HOH . N 6 HOH A 26 626 263 HOH HOH . N 6 HOH A 27 627 189 HOH HOH . N 6 HOH A 28 628 163 HOH HOH . N 6 HOH A 29 629 67 HOH HOH . N 6 HOH A 30 630 211 HOH HOH . N 6 HOH A 31 631 50 HOH HOH . N 6 HOH A 32 632 397 HOH HOH . N 6 HOH A 33 633 188 HOH HOH . N 6 HOH A 34 634 182 HOH HOH . N 6 HOH A 35 635 21 HOH HOH . N 6 HOH A 36 636 27 HOH HOH . N 6 HOH A 37 637 62 HOH HOH . N 6 HOH A 38 638 201 HOH HOH . N 6 HOH A 39 639 32 HOH HOH . N 6 HOH A 40 640 56 HOH HOH . N 6 HOH A 41 641 230 HOH HOH . N 6 HOH A 42 642 385 HOH HOH . N 6 HOH A 43 643 204 HOH HOH . N 6 HOH A 44 644 237 HOH HOH . N 6 HOH A 45 645 6 HOH HOH . N 6 HOH A 46 646 246 HOH HOH . N 6 HOH A 47 647 4 HOH HOH . N 6 HOH A 48 648 311 HOH HOH . N 6 HOH A 49 649 268 HOH HOH . N 6 HOH A 50 650 90 HOH HOH . N 6 HOH A 51 651 72 HOH HOH . N 6 HOH A 52 652 181 HOH HOH . N 6 HOH A 53 653 384 HOH HOH . N 6 HOH A 54 654 60 HOH HOH . N 6 HOH A 55 655 376 HOH HOH . N 6 HOH A 56 656 207 HOH HOH . N 6 HOH A 57 657 127 HOH HOH . N 6 HOH A 58 658 51 HOH HOH . N 6 HOH A 59 659 114 HOH HOH . N 6 HOH A 60 660 55 HOH HOH . N 6 HOH A 61 661 59 HOH HOH . N 6 HOH A 62 662 417 HOH HOH . N 6 HOH A 63 663 34 HOH HOH . N 6 HOH A 64 664 209 HOH HOH . N 6 HOH A 65 665 233 HOH HOH . N 6 HOH A 66 666 355 HOH HOH . N 6 HOH A 67 667 378 HOH HOH . N 6 HOH A 68 668 216 HOH HOH . N 6 HOH A 69 669 52 HOH HOH . N 6 HOH A 70 670 26 HOH HOH . N 6 HOH A 71 671 164 HOH HOH . N 6 HOH A 72 672 66 HOH HOH . N 6 HOH A 73 673 136 HOH HOH . N 6 HOH A 74 674 373 HOH HOH . N 6 HOH A 75 675 35 HOH HOH . N 6 HOH A 76 676 394 HOH HOH . N 6 HOH A 77 677 77 HOH HOH . N 6 HOH A 78 678 125 HOH HOH . N 6 HOH A 79 679 38 HOH HOH . N 6 HOH A 80 680 190 HOH HOH . N 6 HOH A 81 681 161 HOH HOH . N 6 HOH A 82 682 49 HOH HOH . N 6 HOH A 83 683 48 HOH HOH . N 6 HOH A 84 684 420 HOH HOH . N 6 HOH A 85 685 64 HOH HOH . N 6 HOH A 86 686 354 HOH HOH . N 6 HOH A 87 687 241 HOH HOH . N 6 HOH A 88 688 89 HOH HOH . N 6 HOH A 89 689 400 HOH HOH . N 6 HOH A 90 690 151 HOH HOH . N 6 HOH A 91 691 102 HOH HOH . N 6 HOH A 92 692 316 HOH HOH . N 6 HOH A 93 693 87 HOH HOH . N 6 HOH A 94 694 227 HOH HOH . N 6 HOH A 95 695 11 HOH HOH . N 6 HOH A 96 696 236 HOH HOH . N 6 HOH A 97 697 390 HOH HOH . N 6 HOH A 98 698 160 HOH HOH . N 6 HOH A 99 699 179 HOH HOH . N 6 HOH A 100 700 343 HOH HOH . N 6 HOH A 101 701 389 HOH HOH . N 6 HOH A 102 702 377 HOH HOH . N 6 HOH A 103 703 205 HOH HOH . N 6 HOH A 104 704 279 HOH HOH . N 6 HOH A 105 705 218 HOH HOH . N 6 HOH A 106 706 357 HOH HOH . N 6 HOH A 107 707 112 HOH HOH . N 6 HOH A 108 708 364 HOH HOH . N 6 HOH A 109 709 319 HOH HOH . N 6 HOH A 110 710 371 HOH HOH . N 6 HOH A 111 711 298 HOH HOH . N 6 HOH A 112 712 381 HOH HOH . O 6 HOH B 1 601 22 HOH HOH . O 6 HOH B 2 602 144 HOH HOH . O 6 HOH B 3 603 196 HOH HOH . O 6 HOH B 4 604 70 HOH HOH . O 6 HOH B 5 605 31 HOH HOH . O 6 HOH B 6 606 315 HOH HOH . O 6 HOH B 7 607 295 HOH HOH . O 6 HOH B 8 608 25 HOH HOH . O 6 HOH B 9 609 40 HOH HOH . O 6 HOH B 10 610 131 HOH HOH . O 6 HOH B 11 611 115 HOH HOH . O 6 HOH B 12 612 84 HOH HOH . O 6 HOH B 13 613 24 HOH HOH . O 6 HOH B 14 614 170 HOH HOH . O 6 HOH B 15 615 18 HOH HOH . O 6 HOH B 16 616 153 HOH HOH . O 6 HOH B 17 617 121 HOH HOH . O 6 HOH B 18 618 46 HOH HOH . O 6 HOH B 19 619 325 HOH HOH . O 6 HOH B 20 620 9 HOH HOH . O 6 HOH B 21 621 210 HOH HOH . O 6 HOH B 22 622 10 HOH HOH . O 6 HOH B 23 623 217 HOH HOH . O 6 HOH B 24 624 15 HOH HOH . O 6 HOH B 25 625 54 HOH HOH . O 6 HOH B 26 626 78 HOH HOH . O 6 HOH B 27 627 129 HOH HOH . O 6 HOH B 28 628 198 HOH HOH . O 6 HOH B 29 629 212 HOH HOH . O 6 HOH B 30 630 106 HOH HOH . O 6 HOH B 31 631 221 HOH HOH . O 6 HOH B 32 632 407 HOH HOH . O 6 HOH B 33 633 130 HOH HOH . O 6 HOH B 34 634 75 HOH HOH . O 6 HOH B 35 635 111 HOH HOH . O 6 HOH B 36 636 17 HOH HOH . O 6 HOH B 37 637 301 HOH HOH . O 6 HOH B 38 638 28 HOH HOH . O 6 HOH B 39 639 3 HOH HOH . O 6 HOH B 40 640 53 HOH HOH . O 6 HOH B 41 641 120 HOH HOH . O 6 HOH B 42 642 240 HOH HOH . O 6 HOH B 43 643 8 HOH HOH . O 6 HOH B 44 644 146 HOH HOH . O 6 HOH B 45 645 19 HOH HOH . O 6 HOH B 46 646 399 HOH HOH . O 6 HOH B 47 647 107 HOH HOH . O 6 HOH B 48 648 45 HOH HOH . O 6 HOH B 49 649 157 HOH HOH . O 6 HOH B 50 650 128 HOH HOH . O 6 HOH B 51 651 165 HOH HOH . O 6 HOH B 52 652 57 HOH HOH . O 6 HOH B 53 653 96 HOH HOH . O 6 HOH B 54 654 108 HOH HOH . O 6 HOH B 55 655 197 HOH HOH . O 6 HOH B 56 656 61 HOH HOH . O 6 HOH B 57 657 103 HOH HOH . O 6 HOH B 58 658 232 HOH HOH . O 6 HOH B 59 659 95 HOH HOH . O 6 HOH B 60 660 104 HOH HOH . O 6 HOH B 61 661 271 HOH HOH . O 6 HOH B 62 662 13 HOH HOH . O 6 HOH B 63 663 137 HOH HOH . O 6 HOH B 64 664 16 HOH HOH . O 6 HOH B 65 665 366 HOH HOH . O 6 HOH B 66 666 402 HOH HOH . O 6 HOH B 67 667 63 HOH HOH . O 6 HOH B 68 668 183 HOH HOH . O 6 HOH B 69 669 37 HOH HOH . O 6 HOH B 70 670 392 HOH HOH . O 6 HOH B 71 671 172 HOH HOH . O 6 HOH B 72 672 195 HOH HOH . O 6 HOH B 73 673 94 HOH HOH . O 6 HOH B 74 674 167 HOH HOH . O 6 HOH B 75 675 36 HOH HOH . O 6 HOH B 76 676 74 HOH HOH . O 6 HOH B 77 677 149 HOH HOH . O 6 HOH B 78 678 154 HOH HOH . O 6 HOH B 79 679 199 HOH HOH . O 6 HOH B 80 680 81 HOH HOH . O 6 HOH B 81 681 109 HOH HOH . O 6 HOH B 82 682 83 HOH HOH . O 6 HOH B 83 683 341 HOH HOH . O 6 HOH B 84 684 47 HOH HOH . O 6 HOH B 85 685 5 HOH HOH . O 6 HOH B 86 686 113 HOH HOH . O 6 HOH B 87 687 302 HOH HOH . O 6 HOH B 88 688 42 HOH HOH . O 6 HOH B 89 689 409 HOH HOH . O 6 HOH B 90 690 100 HOH HOH . O 6 HOH B 91 691 169 HOH HOH . O 6 HOH B 92 692 88 HOH HOH . O 6 HOH B 93 693 177 HOH HOH . O 6 HOH B 94 694 122 HOH HOH . O 6 HOH B 95 695 395 HOH HOH . O 6 HOH B 96 696 289 HOH HOH . O 6 HOH B 97 697 208 HOH HOH . O 6 HOH B 98 698 76 HOH HOH . O 6 HOH B 99 699 101 HOH HOH . O 6 HOH B 100 700 20 HOH HOH . O 6 HOH B 101 701 33 HOH HOH . O 6 HOH B 102 702 82 HOH HOH . O 6 HOH B 103 703 352 HOH HOH . O 6 HOH B 104 704 267 HOH HOH . O 6 HOH B 105 705 29 HOH HOH . O 6 HOH B 106 706 324 HOH HOH . O 6 HOH B 107 707 259 HOH HOH . O 6 HOH B 108 708 206 HOH HOH . O 6 HOH B 109 709 403 HOH HOH . O 6 HOH B 110 710 143 HOH HOH . O 6 HOH B 111 711 147 HOH HOH . O 6 HOH B 112 712 68 HOH HOH . O 6 HOH B 113 713 258 HOH HOH . O 6 HOH B 114 714 416 HOH HOH . O 6 HOH B 115 715 176 HOH HOH . O 6 HOH B 116 716 293 HOH HOH . O 6 HOH B 117 717 140 HOH HOH . O 6 HOH B 118 718 360 HOH HOH . O 6 HOH B 119 719 79 HOH HOH . O 6 HOH B 120 720 361 HOH HOH . O 6 HOH B 121 721 123 HOH HOH . O 6 HOH B 122 722 142 HOH HOH . O 6 HOH B 123 723 401 HOH HOH . O 6 HOH B 124 724 228 HOH HOH . O 6 HOH B 125 725 251 HOH HOH . O 6 HOH B 126 726 239 HOH HOH . O 6 HOH B 127 727 185 HOH HOH . O 6 HOH B 128 728 238 HOH HOH . O 6 HOH B 129 729 180 HOH HOH . O 6 HOH B 130 730 1 HOH HOH . O 6 HOH B 131 731 141 HOH HOH . O 6 HOH B 132 732 270 HOH HOH . O 6 HOH B 133 733 321 HOH HOH . O 6 HOH B 134 734 362 HOH HOH . O 6 HOH B 135 735 393 HOH HOH . O 6 HOH B 136 736 426 HOH HOH . O 6 HOH B 137 737 406 HOH HOH . O 6 HOH B 138 738 214 HOH HOH . O 6 HOH B 139 739 159 HOH HOH . O 6 HOH B 140 740 414 HOH HOH . O 6 HOH B 141 741 73 HOH HOH . O 6 HOH B 142 742 213 HOH HOH . O 6 HOH B 143 743 138 HOH HOH . O 6 HOH B 144 744 158 HOH HOH . O 6 HOH B 145 745 275 HOH HOH . O 6 HOH B 146 746 192 HOH HOH . O 6 HOH B 147 747 231 HOH HOH . O 6 HOH B 148 748 291 HOH HOH . O 6 HOH B 149 749 226 HOH HOH . O 6 HOH B 150 750 132 HOH HOH . O 6 HOH B 151 751 224 HOH HOH . O 6 HOH B 152 752 155 HOH HOH . O 6 HOH B 153 753 174 HOH HOH . O 6 HOH B 154 754 356 HOH HOH . O 6 HOH B 155 755 303 HOH HOH . O 6 HOH B 156 756 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGO . . . F 5 34.852 -1.085 126.797 1 81.65 ? C1 PGO 504 A 1 HETATM 2 C C2 PGO . . . F 5 35.925 -0.683 127.788 1 78.33 ? C2 PGO 504 A 1 HETATM 3 C C3 PGO . . . F 5 35.485 0.509 128.61 1 104.71 ? C3 PGO 504 A 1 HETATM 4 O O1 PGO . . . F 5 33.706 -0.274 126.943 1 80.46 ? O1 PGO 504 A 1 HETATM 5 O O2 PGO . . . F 5 37.101 -0.349 127.088 1 40.95 ? O2 PGO 504 A 1 HETATM 6 H H11 PGO . . . F 5 35.199 -0.989 125.89 1 97.98 ? H11 PGO 504 A 1 HETATM 7 H H12 PGO . . . F 5 34.607 -2.017 126.95 1 97.98 ? H12 PGO 504 A 1 HETATM 8 H H2 PGO . . . F 5 36.109 -1.433 128.384 1 94 ? H2 PGO 504 A 1 HETATM 9 H H31 PGO . . . F 5 36.2 0.763 129.224 1 125.66 ? H31 PGO 504 A 1 HETATM 10 H H32 PGO . . . F 5 34.687 0.276 129.12 1 125.66 ? H32 PGO 504 A 1 HETATM 11 H H33 PGO . . . F 5 35.285 1.258 128.016 1 125.66 ? H33 PGO 504 A 1 HETATM 12 H HO1 PGO . . . F 5 32.996 -0.706 126.631 1 96.55 ? HO1 PGO 504 A 1 HETATM 13 H HO2 PGO . . . F 5 37.767 -0.237 127.665 1 49.14 ? HO2 PGO 504 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 225 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #