data_5U4A
#
_model_server_result.job_id            '_uPjk6cse5eG5yJbTTTwQA' 
_model_server_result.datetime_utc      '2024-11-26 05:52:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5u4a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":200}' 
#
_entry.id    5U4A 
#
_exptl.entry_id    5U4A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              290.507 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '{3-chloro-4-[(E)-2-(3,5-dihydroxyphenyl)ethenyl]phenyl}boronic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5U4A 
_cell.length_a            42.822 
_cell.length_b            84.928 
_cell.length_c            64.19 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5U4A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 85.644 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C14 H12 B Cl O4' 
_chem_comp.formula_weight    290.507 
_chem_comp.id                7VG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '{3-chloro-4-[(E)-2-(3,5-dihydroxyphenyl)ethenyl]phenyl}boronic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C13 7VG sing 1 n n 
C12 C13 7VG doub 2 n y 
C12 C11 7VG sing 3 n y 
O02 C11 7VG sing 4 n n 
C13 C14 7VG sing 5 n y 
C11 C10 7VG doub 6 n y 
C14 C09 7VG doub 7 n y 
C10 C09 7VG sing 8 n y 
C09 C08 7VG sing 9 n n 
C08 C07 7VG doub 10 e n 
C07 C04 7VG sing 11 n n 
C04 C05 7VG doub 12 n y 
C04 C03 7VG sing 13 n y 
CL1 C03 7VG sing 14 n n 
C05 C06 7VG sing 15 n y 
C03 C02 7VG doub 16 n y 
C06 C01 7VG doub 17 n y 
C02 C01 7VG sing 18 n y 
C01 B01 7VG sing 19 n n 
B01 O04 7VG sing 20 n n 
B01 O03 7VG sing 21 n n 
C02 H1 7VG sing 22 n n 
O04 H2 7VG sing 23 n n 
C05 H3 7VG sing 24 n n 
C06 H4 7VG sing 25 n n 
C12 H5 7VG sing 26 n n 
C14 H6 7VG sing 27 n n 
C07 H7 7VG sing 28 n n 
C08 H8 7VG sing 29 n n 
C10 H9 7VG sing 30 n n 
O01 H10 7VG sing 31 n n 
O02 H11 7VG sing 32 n n 
O03 H12 7VG sing 33 n n 
#
_atom_sites.entry_id                     5U4A 
_atom_sites.fract_transf_matrix[1][1]    0.023352 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011775 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015579 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 7VG A 1 200 200 7VG BSL . 
D 2 7VG B 1 200 200 7VG BSL . 
E 3 HOH A 1 301 48 HOH HOH . 
E 3 HOH A 2 302 28 HOH HOH . 
E 3 HOH A 3 303 33 HOH HOH . 
E 3 HOH A 4 304 27 HOH HOH . 
E 3 HOH A 5 305 18 HOH HOH . 
E 3 HOH A 6 306 32 HOH HOH . 
E 3 HOH A 7 307 6 HOH HOH . 
E 3 HOH A 8 308 20 HOH HOH . 
E 3 HOH A 9 309 12 HOH HOH . 
E 3 HOH A 10 310 5 HOH HOH . 
E 3 HOH A 11 311 24 HOH HOH . 
E 3 HOH A 12 312 68 HOH HOH . 
E 3 HOH A 13 313 41 HOH HOH . 
E 3 HOH A 14 314 31 HOH HOH . 
E 3 HOH A 15 315 1 HOH HOH . 
E 3 HOH A 16 316 4 HOH HOH . 
E 3 HOH A 17 317 37 HOH HOH . 
E 3 HOH A 18 318 43 HOH HOH . 
E 3 HOH A 19 319 3 HOH HOH . 
E 3 HOH A 20 320 58 HOH HOH . 
E 3 HOH A 21 321 39 HOH HOH . 
E 3 HOH A 22 322 15 HOH HOH . 
E 3 HOH A 23 323 25 HOH HOH . 
E 3 HOH A 24 324 53 HOH HOH . 
E 3 HOH A 25 325 34 HOH HOH . 
E 3 HOH A 26 326 22 HOH HOH . 
E 3 HOH A 27 327 55 HOH HOH . 
E 3 HOH A 28 328 30 HOH HOH . 
E 3 HOH A 29 329 10 HOH HOH . 
E 3 HOH A 30 330 38 HOH HOH . 
E 3 HOH A 31 331 21 HOH HOH . 
E 3 HOH A 32 332 14 HOH HOH . 
E 3 HOH A 33 333 35 HOH HOH . 
E 3 HOH A 34 334 36 HOH HOH . 
E 3 HOH A 35 335 40 HOH HOH . 
E 3 HOH A 36 336 52 HOH HOH . 
E 3 HOH A 37 337 51 HOH HOH . 
E 3 HOH A 38 338 62 HOH HOH . 
E 3 HOH A 39 339 57 HOH HOH . 
E 3 HOH A 40 340 47 HOH HOH . 
E 3 HOH A 41 341 59 HOH HOH . 
E 3 HOH A 42 342 63 HOH HOH . 
E 3 HOH A 43 343 69 HOH HOH . 
E 3 HOH A 44 344 73 HOH HOH . 
E 3 HOH A 45 345 71 HOH HOH . 
F 3 HOH B 1 301 49 HOH HOH . 
F 3 HOH B 2 302 61 HOH HOH . 
F 3 HOH B 3 303 8 HOH HOH . 
F 3 HOH B 4 304 13 HOH HOH . 
F 3 HOH B 5 305 9 HOH HOH . 
F 3 HOH B 6 306 26 HOH HOH . 
F 3 HOH B 7 307 19 HOH HOH . 
F 3 HOH B 8 308 56 HOH HOH . 
F 3 HOH B 9 309 29 HOH HOH . 
F 3 HOH B 10 310 2 HOH HOH . 
F 3 HOH B 11 311 64 HOH HOH . 
F 3 HOH B 12 312 16 HOH HOH . 
F 3 HOH B 13 313 11 HOH HOH . 
F 3 HOH B 14 314 75 HOH HOH . 
F 3 HOH B 15 315 46 HOH HOH . 
F 3 HOH B 16 316 23 HOH HOH . 
F 3 HOH B 17 317 42 HOH HOH . 
F 3 HOH B 18 318 17 HOH HOH . 
F 3 HOH B 19 319 7 HOH HOH . 
F 3 HOH B 20 320 50 HOH HOH . 
F 3 HOH B 21 321 74 HOH HOH . 
F 3 HOH B 22 322 72 HOH HOH . 
F 3 HOH B 23 323 60 HOH HOH . 
F 3 HOH B 24 324 54 HOH HOH . 
F 3 HOH B 25 325 65 HOH HOH . 
F 3 HOH B 26 326 70 HOH HOH . 
F 3 HOH B 27 327 45 HOH HOH . 
F 3 HOH B 28 328 66 HOH HOH . 
F 3 HOH B 29 329 67 HOH HOH . 
F 3 HOH B 30 330 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 7VG . . . C 2 43.668 -0.961 30.863 0.5 36.77 ? C01 7VG 200 A 1 
HETATM 2 C C02 7VG . . . C 2 42.817 0.032 30.31 0.5 36.1 ? C02 7VG 200 A 1 
HETATM 3 C C03 7VG . . . C 2 42.688 0.28 28.913 0.5 35.41 ? C03 7VG 200 A 1 
HETATM 4 C C04 7VG . . . C 2 43.432 -0.462 27.916 0.5 33.12 ? C04 7VG 200 A 1 
HETATM 5 O O04 7VG . . . C 2 44.763 -2.193 32.866 0.5 41.13 ? O04 7VG 200 A 1 
HETATM 6 C C05 7VG . . . C 2 44.257 -1.443 28.515 0.5 38.44 ? C05 7VG 200 A 1 
HETATM 7 C C06 7VG . . . C 2 44.369 -1.668 29.899 0.5 34.97 ? C06 7VG 200 A 1 
HETATM 8 C C11 7VG . . . C 2 43.03 -1.024 22.057 0.5 23.92 ? C11 7VG 200 A 1 
HETATM 9 C C12 7VG . . . C 2 42.817 0.031 21.161 0.5 24.72 ? C12 7VG 200 A 1 
HETATM 10 C C13 7VG . . . C 2 42.499 1.275 21.711 0.5 24.09 ? C13 7VG 200 A 1 
HETATM 11 C C14 7VG . . . C 2 42.399 1.483 23.105 0.5 25.05 ? C14 7VG 200 A 1 
HETATM 12 C C07 7VG . . . C 2 43.352 -0.284 26.4 0.5 30.26 ? C07 7VG 200 A 1 
HETATM 13 C C08 7VG . . . C 2 42.548 0.403 25.534 0.5 28.98 ? C08 7VG 200 A 1 
HETATM 14 C C09 7VG . . . C 2 42.617 0.411 24.017 0.5 25.58 ? C09 7VG 200 A 1 
HETATM 15 C C10 7VG . . . C 2 42.925 -0.837 23.437 0.5 25.37 ? C10 7VG 200 A 1 
HETATM 16 O O01 7VG . . . C 2 42.286 2.356 20.852 0.5 25.13 ? O01 7VG 200 A 1 
HETATM 17 O O02 7VG . . . C 2 43.345 -2.307 21.624 0.5 26.34 ? O02 7VG 200 A 1 
HETATM 18 O O03 7VG . . . C 2 43.047 -0.663 33.389 0.5 41.28 ? O03 7VG 200 A 1 
HETATM 19 CL CL1 7VG . . . C 2 41.601 1.534 28.464 0.5 39.31 ? CL1 7VG 200 A 1 
HETATM 20 B B01 7VG . . . C 2 43.828 -1.275 32.439 0.5 38.58 ? B01 7VG 200 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           20 
#