data_5U4T # _model_server_result.job_id kU1obKta7qTisZxEWHjPWA _model_server_result.datetime_utc '2024-12-01 17:44:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u4t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":415}' # _entry.id 5U4T # _exptl.entry_id 5U4T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U4T _cell.length_a 66.62 _cell.length_b 66.782 _cell.length_c 69.123 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U4T _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 382 n n C C2 TRS sing 383 n n C C3 TRS sing 384 n n C N TRS sing 385 n n C1 O1 TRS sing 386 n n C1 H11 TRS sing 387 n n C1 H12 TRS sing 388 n n C2 O2 TRS sing 389 n n C2 H21 TRS sing 390 n n C2 H22 TRS sing 391 n n C3 O3 TRS sing 392 n n C3 H31 TRS sing 393 n n C3 H32 TRS sing 394 n n N HN1 TRS sing 395 n n N HN2 TRS sing 396 n n N HN3 TRS sing 397 n n O1 HO1 TRS sing 398 n n O2 HO2 TRS sing 399 n n O3 HO3 TRS sing 400 n n # _atom_sites.entry_id 5U4T _atom_sites.fract_transf_matrix[1][1] 0.015011 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014467 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 401 1 IOD IOD . C 2 IOD A 1 402 2 IOD IOD . D 2 IOD A 1 403 5 IOD IOD . E 2 IOD A 1 404 7 IOD IOD . F 2 IOD A 1 405 22 IOD IOD . G 2 IOD A 1 406 23 IOD IOD . H 2 IOD A 1 407 24 IOD IOD . I 2 IOD A 1 408 25 IOD IOD . J 2 IOD A 1 409 26 IOD IOD . K 2 IOD A 1 410 27 IOD IOD . L 2 IOD A 1 411 29 IOD IOD . M 2 IOD A 1 412 30 IOD IOD . N 2 IOD A 1 413 32 IOD IOD . O 3 SAH A 1 414 1 SAH SAH . P 4 TRS A 1 415 1 TRS TRS . Q 5 HOH A 1 501 151 HOH HOH . Q 5 HOH A 2 502 110 HOH HOH . Q 5 HOH A 3 503 90 HOH HOH . Q 5 HOH A 4 504 111 HOH HOH . Q 5 HOH A 5 505 157 HOH HOH . Q 5 HOH A 6 506 60 HOH HOH . Q 5 HOH A 7 507 172 HOH HOH . Q 5 HOH A 8 508 169 HOH HOH . Q 5 HOH A 9 509 100 HOH HOH . Q 5 HOH A 10 510 89 HOH HOH . Q 5 HOH A 11 511 52 HOH HOH . Q 5 HOH A 12 512 154 HOH HOH . Q 5 HOH A 13 513 70 HOH HOH . Q 5 HOH A 14 514 94 HOH HOH . Q 5 HOH A 15 515 45 HOH HOH . Q 5 HOH A 16 516 97 HOH HOH . Q 5 HOH A 17 517 38 HOH HOH . Q 5 HOH A 18 518 69 HOH HOH . Q 5 HOH A 19 519 55 HOH HOH . Q 5 HOH A 20 520 14 HOH HOH . Q 5 HOH A 21 521 73 HOH HOH . Q 5 HOH A 22 522 36 HOH HOH . Q 5 HOH A 23 523 77 HOH HOH . Q 5 HOH A 24 524 49 HOH HOH . Q 5 HOH A 25 525 59 HOH HOH . Q 5 HOH A 26 526 131 HOH HOH . Q 5 HOH A 27 527 22 HOH HOH . Q 5 HOH A 28 528 71 HOH HOH . Q 5 HOH A 29 529 75 HOH HOH . Q 5 HOH A 30 530 99 HOH HOH . Q 5 HOH A 31 531 3 HOH HOH . Q 5 HOH A 32 532 23 HOH HOH . Q 5 HOH A 33 533 51 HOH HOH . Q 5 HOH A 34 534 76 HOH HOH . Q 5 HOH A 35 535 16 HOH HOH . Q 5 HOH A 36 536 64 HOH HOH . Q 5 HOH A 37 537 13 HOH HOH . Q 5 HOH A 38 538 88 HOH HOH . Q 5 HOH A 39 539 68 HOH HOH . Q 5 HOH A 40 540 11 HOH HOH . Q 5 HOH A 41 541 17 HOH HOH . Q 5 HOH A 42 542 87 HOH HOH . Q 5 HOH A 43 543 57 HOH HOH . Q 5 HOH A 44 544 129 HOH HOH . Q 5 HOH A 45 545 58 HOH HOH . Q 5 HOH A 46 546 12 HOH HOH . Q 5 HOH A 47 547 15 HOH HOH . Q 5 HOH A 48 548 92 HOH HOH . Q 5 HOH A 49 549 127 HOH HOH . Q 5 HOH A 50 550 134 HOH HOH . Q 5 HOH A 51 551 26 HOH HOH . Q 5 HOH A 52 552 120 HOH HOH . Q 5 HOH A 53 553 46 HOH HOH . Q 5 HOH A 54 554 133 HOH HOH . Q 5 HOH A 55 555 91 HOH HOH . Q 5 HOH A 56 556 98 HOH HOH . Q 5 HOH A 57 557 153 HOH HOH . Q 5 HOH A 58 558 50 HOH HOH . Q 5 HOH A 59 559 106 HOH HOH . Q 5 HOH A 60 560 93 HOH HOH . Q 5 HOH A 61 561 147 HOH HOH . Q 5 HOH A 62 562 6 HOH HOH . Q 5 HOH A 63 563 142 HOH HOH . Q 5 HOH A 64 564 28 HOH HOH . Q 5 HOH A 65 565 10 HOH HOH . Q 5 HOH A 66 566 125 HOH HOH . Q 5 HOH A 67 567 79 HOH HOH . Q 5 HOH A 68 568 2 HOH HOH . Q 5 HOH A 69 569 112 HOH HOH . Q 5 HOH A 70 570 19 HOH HOH . Q 5 HOH A 71 571 80 HOH HOH . Q 5 HOH A 72 572 81 HOH HOH . Q 5 HOH A 73 573 47 HOH HOH . Q 5 HOH A 74 574 31 HOH HOH . Q 5 HOH A 75 575 84 HOH HOH . Q 5 HOH A 76 576 34 HOH HOH . Q 5 HOH A 77 577 121 HOH HOH . Q 5 HOH A 78 578 5 HOH HOH . Q 5 HOH A 79 579 105 HOH HOH . Q 5 HOH A 80 580 37 HOH HOH . Q 5 HOH A 81 581 20 HOH HOH . Q 5 HOH A 82 582 126 HOH HOH . Q 5 HOH A 83 583 117 HOH HOH . Q 5 HOH A 84 584 33 HOH HOH . Q 5 HOH A 85 585 18 HOH HOH . Q 5 HOH A 86 586 1 HOH HOH . Q 5 HOH A 87 587 48 HOH HOH . Q 5 HOH A 88 588 44 HOH HOH . Q 5 HOH A 89 589 65 HOH HOH . Q 5 HOH A 90 590 21 HOH HOH . Q 5 HOH A 91 591 32 HOH HOH . Q 5 HOH A 92 592 123 HOH HOH . Q 5 HOH A 93 593 39 HOH HOH . Q 5 HOH A 94 594 173 HOH HOH . Q 5 HOH A 95 595 7 HOH HOH . Q 5 HOH A 96 596 109 HOH HOH . Q 5 HOH A 97 597 152 HOH HOH . Q 5 HOH A 98 598 72 HOH HOH . Q 5 HOH A 99 599 27 HOH HOH . Q 5 HOH A 100 600 9 HOH HOH . Q 5 HOH A 101 601 82 HOH HOH . Q 5 HOH A 102 602 149 HOH HOH . Q 5 HOH A 103 603 30 HOH HOH . Q 5 HOH A 104 604 155 HOH HOH . Q 5 HOH A 105 605 163 HOH HOH . Q 5 HOH A 106 606 130 HOH HOH . Q 5 HOH A 107 607 146 HOH HOH . Q 5 HOH A 108 608 78 HOH HOH . Q 5 HOH A 109 609 166 HOH HOH . Q 5 HOH A 110 610 42 HOH HOH . Q 5 HOH A 111 611 54 HOH HOH . Q 5 HOH A 112 612 8 HOH HOH . Q 5 HOH A 113 613 122 HOH HOH . Q 5 HOH A 114 614 24 HOH HOH . Q 5 HOH A 115 615 115 HOH HOH . Q 5 HOH A 116 616 61 HOH HOH . Q 5 HOH A 117 617 95 HOH HOH . Q 5 HOH A 118 618 35 HOH HOH . Q 5 HOH A 119 619 4 HOH HOH . Q 5 HOH A 120 620 53 HOH HOH . Q 5 HOH A 121 621 29 HOH HOH . Q 5 HOH A 122 622 164 HOH HOH . Q 5 HOH A 123 623 62 HOH HOH . Q 5 HOH A 124 624 43 HOH HOH . Q 5 HOH A 125 625 74 HOH HOH . Q 5 HOH A 126 626 143 HOH HOH . Q 5 HOH A 127 627 113 HOH HOH . Q 5 HOH A 128 628 63 HOH HOH . Q 5 HOH A 129 629 40 HOH HOH . Q 5 HOH A 130 630 67 HOH HOH . Q 5 HOH A 131 631 86 HOH HOH . Q 5 HOH A 132 632 165 HOH HOH . Q 5 HOH A 133 633 139 HOH HOH . Q 5 HOH A 134 634 25 HOH HOH . Q 5 HOH A 135 635 104 HOH HOH . Q 5 HOH A 136 636 174 HOH HOH . Q 5 HOH A 137 637 103 HOH HOH . Q 5 HOH A 138 638 162 HOH HOH . Q 5 HOH A 139 639 170 HOH HOH . Q 5 HOH A 140 640 101 HOH HOH . Q 5 HOH A 141 641 108 HOH HOH . Q 5 HOH A 142 642 148 HOH HOH . Q 5 HOH A 143 643 41 HOH HOH . Q 5 HOH A 144 644 135 HOH HOH . Q 5 HOH A 145 645 140 HOH HOH . Q 5 HOH A 146 646 161 HOH HOH . Q 5 HOH A 147 647 156 HOH HOH . Q 5 HOH A 148 648 144 HOH HOH . Q 5 HOH A 149 649 175 HOH HOH . Q 5 HOH A 150 650 168 HOH HOH . Q 5 HOH A 151 651 158 HOH HOH . Q 5 HOH A 152 652 171 HOH HOH . Q 5 HOH A 153 653 118 HOH HOH . Q 5 HOH A 154 654 145 HOH HOH . Q 5 HOH A 155 655 102 HOH HOH . Q 5 HOH A 156 656 159 HOH HOH . Q 5 HOH A 157 657 85 HOH HOH . Q 5 HOH A 158 658 137 HOH HOH . Q 5 HOH A 159 659 114 HOH HOH . Q 5 HOH A 160 660 141 HOH HOH . Q 5 HOH A 161 661 119 HOH HOH . Q 5 HOH A 162 662 167 HOH HOH . Q 5 HOH A 163 663 132 HOH HOH . Q 5 HOH A 164 664 66 HOH HOH . Q 5 HOH A 165 665 138 HOH HOH . Q 5 HOH A 166 666 107 HOH HOH . Q 5 HOH A 167 667 136 HOH HOH . Q 5 HOH A 168 668 128 HOH HOH . Q 5 HOH A 169 669 56 HOH HOH . Q 5 HOH A 170 670 160 HOH HOH . Q 5 HOH A 171 671 150 HOH HOH . Q 5 HOH A 172 672 124 HOH HOH . Q 5 HOH A 173 673 83 HOH HOH . Q 5 HOH A 174 674 96 HOH HOH . Q 5 HOH A 175 675 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . P 4 26.911 56.985 37.355 1 28.45 ? C TRS 415 A 1 HETATM 2 C C1 TRS . . . P 4 27.64 58.327 37.276 1 28.1 ? C1 TRS 415 A 1 HETATM 3 C C2 TRS . . . P 4 27.609 56.089 38.379 1 27.4 ? C2 TRS 415 A 1 HETATM 4 C C3 TRS . . . P 4 26.835 56.353 35.955 1 34.92 ? C3 TRS 415 A 1 HETATM 5 N N TRS . . . P 4 25.553 57.242 37.81 1 27.97 ? N TRS 415 A 1 HETATM 6 O O1 TRS . . . P 4 28.834 58.201 36.543 1 40.34 ? O1 TRS 415 A 1 HETATM 7 O O2 TRS . . . P 4 27.298 54.728 38.23 1 30.56 ? O2 TRS 415 A 1 HETATM 8 O O3 TRS . . . P 4 26.056 57.125 35.09 1 32.02 ? O3 TRS 415 A 1 HETATM 9 H H11 TRS . . . P 4 27.866 58.679 38.282 1 33.72 ? H11 TRS 415 A 1 HETATM 10 H H12 TRS . . . P 4 26.995 59.064 36.798 1 33.72 ? H12 TRS 415 A 1 HETATM 11 H H21 TRS . . . P 4 27.327 56.41 39.381 1 32.88 ? H21 TRS 415 A 1 HETATM 12 H H22 TRS . . . P 4 28.687 56.218 38.286 1 32.88 ? H22 TRS 415 A 1 HETATM 13 H H31 TRS . . . P 4 26.408 55.353 36.032 1 41.9 ? H31 TRS 415 A 1 HETATM 14 H H32 TRS . . . P 4 27.841 56.256 35.546 1 41.9 ? H32 TRS 415 A 1 HETATM 15 H HN1 TRS . . . P 4 25.501 57.662 38.733 1 33.56 ? HN1 TRS 415 A 1 HETATM 16 H HN2 TRS . . . P 4 24.967 57.696 37.118 1 33.56 ? HN2 TRS 415 A 1 HETATM 17 H HN3 TRS . . . P 4 25.147 56.325 37.926 1 33.56 ? HN3 TRS 415 A 1 HETATM 18 H HO1 TRS . . . P 4 29.286 59.07 36.503 1 48.41 ? HO1 TRS 415 A 1 HETATM 19 H HO2 TRS . . . P 4 27.773 54.208 38.911 1 36.68 ? HO2 TRS 415 A 1 HETATM 20 H HO3 TRS . . . P 4 26.026 56.698 34.208 1 38.42 ? HO3 TRS 415 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 1159 _model_server_stats.encode_time_ms 63 _model_server_stats.element_count 20 #