data_5U6B
#
_model_server_result.job_id            LF-3yywrgK7tH-ljlOaPww 
_model_server_result.datetime_utc      '2025-07-04 21:53:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5u6b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":9001}' 
#
_entry.id    5U6B 
#
_exptl.entry_id    5U6B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              460.889 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (10R)-7-amino-11-chloro-12-fluoro-1-(2-hydroxyethyl)-3,10,16-trimethyl-16,17-dihydro-1H-8,4-(azeno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecin-15(10H)-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.97 
_cell.angle_gamma         90 
_cell.entry_id            5U6B 
_cell.length_a            81.68 
_cell.length_b            100.704 
_cell.length_c            81.921 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5U6B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D,H 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C21 H22 Cl F N6 O3' 
_chem_comp.formula_weight    460.889 
_chem_comp.id                7YS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (10R)-7-amino-11-chloro-12-fluoro-1-(2-hydroxyethyl)-3,10,16-trimethyl-16,17-dihydro-1H-8,4-(azeno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecin-15(10H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F24 C21 7YS sing 1 n n 
CL25 C20 7YS sing 2 n n 
C21 C20 7YS doub 3 n y 
C21 C22 7YS sing 4 n y 
C20 C16 7YS sing 5 n y 
C22 C23 7YS doub 6 n y 
C19 C17 7YS sing 7 n n 
C16 C17 7YS sing 8 n n 
C16 C15 7YS doub 9 n y 
C23 C15 7YS sing 10 n y 
C17 O18 7YS sing 11 n n 
O18 C1 7YS sing 12 n n 
C15 C14 7YS sing 13 n n 
N32 C2 7YS sing 14 n n 
O26 C14 7YS doub 15 n n 
C1 C2 7YS doub 16 n y 
C1 N6 7YS sing 17 n y 
C2 N3 7YS sing 18 n y 
C14 N13 7YS sing 19 n n 
N6 C5 7YS doub 20 n y 
N3 C4 7YS doub 21 n y 
N13 C12 7YS sing 22 n n 
N13 C27 7YS sing 23 n n 
C12 C11 7YS sing 24 n n 
C5 C4 7YS sing 25 n y 
C5 C7 7YS sing 26 n n 
C11 C7 7YS doub 27 n y 
C11 N10 7YS sing 28 n y 
C7 C8 7YS sing 29 n y 
O30 C29 7YS sing 30 n n 
N10 C28 7YS sing 31 n n 
N10 N9 7YS sing 32 n y 
C8 N9 7YS doub 33 n y 
C8 C31 7YS sing 34 n n 
C28 C29 7YS sing 35 n n 
C4 H1 7YS sing 36 n n 
C17 H2 7YS sing 37 n n 
C22 H3 7YS sing 38 n n 
C28 H4 7YS sing 39 n n 
C28 H5 7YS sing 40 n n 
C12 H6 7YS sing 41 n n 
C12 H7 7YS sing 42 n n 
C19 H8 7YS sing 43 n n 
C19 H9 7YS sing 44 n n 
C19 H10 7YS sing 45 n n 
C23 H11 7YS sing 46 n n 
C27 H12 7YS sing 47 n n 
C27 H13 7YS sing 48 n n 
C27 H14 7YS sing 49 n n 
C29 H15 7YS sing 50 n n 
C29 H16 7YS sing 51 n n 
O30 H17 7YS sing 52 n n 
C31 H18 7YS sing 53 n n 
C31 H19 7YS sing 54 n n 
C31 H20 7YS sing 55 n n 
N32 H21 7YS sing 56 n n 
N32 H22 7YS sing 57 n n 
#
_atom_sites.entry_id                     5U6B 
_atom_sites.fract_transf_matrix[1][1]    0.012243 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00085 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00993 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012236 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 7YS A 1 9001 9001 7YS LIG . 
F 2 7YS B 1 9001 9001 7YS LIG . 
G 2 7YS C 1 9001 9001 7YS LIG . 
H 2 7YS D 1 9001 9001 7YS LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N3 7YS . . . G 2 -25.696 -13.817 -30.016 1 41.64 ? N3 7YS 9001 C 1 
HETATM 2 C C4 7YS . . . G 2 -26.263 -14.323 -28.914 1 41.41 ? C4 7YS 9001 C 1 
HETATM 3 C C5 7YS . . . G 2 -25.932 -13.885 -27.636 1 43.55 ? C5 7YS 9001 C 1 
HETATM 4 C C7 7YS . . . G 2 -26.403 -14.589 -26.404 1 45.8 ? C7 7YS 9001 C 1 
HETATM 5 C C8 7YS . . . G 2 -27.59 -15.44 -26.272 1 45.38 ? C8 7YS 9001 C 1 
HETATM 6 C C15 7YS . . . G 2 -22.363 -12.077 -25.16 1 47.93 ? C15 7YS 9001 C 1 
HETATM 7 C C17 7YS . . . G 2 -23.23 -10.81 -27.2 1 46.55 ? C17 7YS 9001 C 1 
HETATM 8 C C20 7YS . . . G 2 -20.965 -12.064 -27.09 1 50.21 ? C20 7YS 9001 C 1 
HETATM 9 C C21 7YS . . . G 2 -20.051 -12.834 -26.453 1 50.74 ? C21 7YS 9001 C 1 
HETATM 10 C C22 7YS . . . G 2 -20.251 -13.246 -25.159 1 51.44 ? C22 7YS 9001 C 1 
HETATM 11 C C28 7YS . . . G 2 -26.454 -15.715 -22.947 1 39.91 ? C28 7YS 9001 C 1 
HETATM 12 C C1 7YS . . . G 2 -24.484 -12.37 -28.574 1 44.82 ? C1 7YS 9001 C 1 
HETATM 13 C C2 7YS . . . G 2 -24.763 -12.847 -29.902 1 43.48 ? C2 7YS 9001 C 1 
HETATM 14 N N6 7YS . . . G 2 -25.064 -12.871 -27.495 1 44.47 ? N6 7YS 9001 C 1 
HETATM 15 N N9 7YS . . . G 2 -27.694 -15.882 -25.033 1 45.5 ? N9 7YS 9001 C 1 
HETATM 16 N N10 7YS . . . G 2 -26.612 -15.369 -24.359 1 44.28 ? N10 7YS 9001 C 1 
HETATM 17 C C11 7YS . . . G 2 -25.819 -14.592 -25.143 1 45.98 ? C11 7YS 9001 C 1 
HETATM 18 C C12 7YS . . . G 2 -24.537 -13.938 -24.68 1 48.07 ? C12 7YS 9001 C 1 
HETATM 19 N N13 7YS . . . G 2 -24.582 -12.558 -24.214 1 50.09 ? N13 7YS 9001 C 1 
HETATM 20 C C14 7YS . . . G 2 -23.59 -11.665 -24.396 1 49.92 ? C14 7YS 9001 C 1 
HETATM 21 C C16 7YS . . . G 2 -22.159 -11.661 -26.483 1 48.24 ? C16 7YS 9001 C 1 
HETATM 22 O O18 7YS . . . G 2 -23.572 -11.378 -28.465 1 45.44 ? O18 7YS 9001 C 1 
HETATM 23 C C19 7YS . . . G 2 -22.796 -9.376 -27.423 1 46.24 ? C19 7YS 9001 C 1 
HETATM 24 C C23 7YS . . . G 2 -21.408 -12.859 -24.507 1 49.29 ? C23 7YS 9001 C 1 
HETATM 25 F F24 7YS . . . G 2 -18.932 -13.232 -27.103 1 48.9 ? F24 7YS 9001 C 1 
HETATM 26 CL CL25 7YS . . . G 2 -20.586 -11.59 -28.704 1 50.57 ? CL25 7YS 9001 C 1 
HETATM 27 O O26 7YS . . . G 2 -23.624 -10.544 -23.932 1 52.08 ? O26 7YS 9001 C 1 
HETATM 28 C C27 7YS . . . G 2 -25.763 -12.156 -23.463 1 49.95 ? C27 7YS 9001 C 1 
HETATM 29 C C29 7YS . . . G 2 -25.971 -17.132 -22.747 1 38.5 ? C29 7YS 9001 C 1 
HETATM 30 O O30 7YS . . . G 2 -24.763 -17.369 -23.435 1 37.57 ? O30 7YS 9001 C 1 
HETATM 31 C C31 7YS . . . G 2 -28.593 -15.864 -27.293 1 43.65 ? C31 7YS 9001 C 1 
HETATM 32 N N32 7YS . . . G 2 -24.165 -12.422 -31.016 1 43.53 ? N32 7YS 9001 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#