data_5U6C
#
_model_server_result.job_id            NykTBe18wRPFaAAIJmUMSw 
_model_server_result.datetime_utc      '2024-11-14 14:50:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5u6c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":9001}' 
#
_entry.id    5U6C 
#
_exptl.entry_id    5U6C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              460.889 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (10R)-7-amino-11-chloro-12-fluoro-1-(2-hydroxyethyl)-3,10,16-trimethyl-16,17-dihydro-1H-8,4-(azeno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecin-15(10H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.8 
_cell.angle_gamma         90 
_cell.entry_id            5U6C 
_cell.length_a            51.692 
_cell.length_b            92.33 
_cell.length_c            69.269 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5U6C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H22 Cl F N6 O3' 
_chem_comp.formula_weight    460.889 
_chem_comp.id                7YS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (10R)-7-amino-11-chloro-12-fluoro-1-(2-hydroxyethyl)-3,10,16-trimethyl-16,17-dihydro-1H-8,4-(azeno)pyrazolo[4,3-h][2,5,11]benzoxadiazacyclotetradecin-15(10H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F24 C21 7YS sing 1 n n 
CL25 C20 7YS sing 2 n n 
C21 C20 7YS doub 3 n y 
C21 C22 7YS sing 4 n y 
C20 C16 7YS sing 5 n y 
C22 C23 7YS doub 6 n y 
C19 C17 7YS sing 7 n n 
C16 C17 7YS sing 8 n n 
C16 C15 7YS doub 9 n y 
C23 C15 7YS sing 10 n y 
C17 O18 7YS sing 11 n n 
O18 C1 7YS sing 12 n n 
C15 C14 7YS sing 13 n n 
N32 C2 7YS sing 14 n n 
O26 C14 7YS doub 15 n n 
C1 C2 7YS doub 16 n y 
C1 N6 7YS sing 17 n y 
C2 N3 7YS sing 18 n y 
C14 N13 7YS sing 19 n n 
N6 C5 7YS doub 20 n y 
N3 C4 7YS doub 21 n y 
N13 C12 7YS sing 22 n n 
N13 C27 7YS sing 23 n n 
C12 C11 7YS sing 24 n n 
C5 C4 7YS sing 25 n y 
C5 C7 7YS sing 26 n n 
C11 C7 7YS doub 27 n y 
C11 N10 7YS sing 28 n y 
C7 C8 7YS sing 29 n y 
O30 C29 7YS sing 30 n n 
N10 C28 7YS sing 31 n n 
N10 N9 7YS sing 32 n y 
C8 N9 7YS doub 33 n y 
C8 C31 7YS sing 34 n n 
C28 C29 7YS sing 35 n n 
C4 H1 7YS sing 36 n n 
C17 H2 7YS sing 37 n n 
C22 H3 7YS sing 38 n n 
C28 H4 7YS sing 39 n n 
C28 H5 7YS sing 40 n n 
C12 H6 7YS sing 41 n n 
C12 H7 7YS sing 42 n n 
C19 H8 7YS sing 43 n n 
C19 H9 7YS sing 44 n n 
C19 H10 7YS sing 45 n n 
C23 H11 7YS sing 46 n n 
C27 H12 7YS sing 47 n n 
C27 H13 7YS sing 48 n n 
C27 H14 7YS sing 49 n n 
C29 H15 7YS sing 50 n n 
C29 H16 7YS sing 51 n n 
O30 H17 7YS sing 52 n n 
C31 H18 7YS sing 53 n n 
C31 H19 7YS sing 54 n n 
C31 H20 7YS sing 55 n n 
N32 H21 7YS sing 56 n n 
N32 H22 7YS sing 57 n n 
#
_atom_sites.entry_id                     5U6C 
_atom_sites.fract_transf_matrix[1][1]    0.019345 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00369 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010831 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014697 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 7YS A 1 9001 9001 7YS LIG . 
D 2 7YS B 1 9001 9001 7YS LIG . 
E 3 HOH A 1 9101 47 HOH HOH . 
E 3 HOH A 2 9102 16 HOH HOH . 
E 3 HOH A 3 9103 21 HOH HOH . 
E 3 HOH A 4 9104 70 HOH HOH . 
E 3 HOH A 5 9105 32 HOH HOH . 
E 3 HOH A 6 9106 13 HOH HOH . 
E 3 HOH A 7 9107 164 HOH HOH . 
E 3 HOH A 8 9108 105 HOH HOH . 
E 3 HOH A 9 9109 102 HOH HOH . 
E 3 HOH A 10 9110 68 HOH HOH . 
E 3 HOH A 11 9111 76 HOH HOH . 
E 3 HOH A 12 9112 114 HOH HOH . 
E 3 HOH A 13 9113 6 HOH HOH . 
E 3 HOH A 14 9114 115 HOH HOH . 
E 3 HOH A 15 9115 112 HOH HOH . 
E 3 HOH A 16 9116 78 HOH HOH . 
E 3 HOH A 17 9117 85 HOH HOH . 
E 3 HOH A 18 9118 63 HOH HOH . 
E 3 HOH A 19 9119 69 HOH HOH . 
E 3 HOH A 20 9120 106 HOH HOH . 
E 3 HOH A 21 9121 125 HOH HOH . 
E 3 HOH A 22 9122 84 HOH HOH . 
E 3 HOH A 23 9123 36 HOH HOH . 
E 3 HOH A 24 9124 133 HOH HOH . 
E 3 HOH A 25 9125 147 HOH HOH . 
E 3 HOH A 26 9126 55 HOH HOH . 
E 3 HOH A 27 9127 166 HOH HOH . 
E 3 HOH A 28 9128 111 HOH HOH . 
E 3 HOH A 29 9129 28 HOH HOH . 
E 3 HOH A 30 9130 80 HOH HOH . 
E 3 HOH A 31 9131 110 HOH HOH . 
E 3 HOH A 32 9132 158 HOH HOH . 
E 3 HOH A 33 9133 42 HOH HOH . 
E 3 HOH A 34 9134 22 HOH HOH . 
E 3 HOH A 35 9135 5 HOH HOH . 
E 3 HOH A 36 9136 45 HOH HOH . 
E 3 HOH A 37 9137 74 HOH HOH . 
E 3 HOH A 38 9138 87 HOH HOH . 
E 3 HOH A 39 9139 103 HOH HOH . 
E 3 HOH A 40 9140 23 HOH HOH . 
E 3 HOH A 41 9141 119 HOH HOH . 
E 3 HOH A 42 9142 140 HOH HOH . 
E 3 HOH A 43 9143 171 HOH HOH . 
E 3 HOH A 44 9144 165 HOH HOH . 
E 3 HOH A 45 9145 113 HOH HOH . 
E 3 HOH A 46 9146 57 HOH HOH . 
E 3 HOH A 47 9147 96 HOH HOH . 
E 3 HOH A 48 9148 73 HOH HOH . 
E 3 HOH A 49 9149 4 HOH HOH . 
E 3 HOH A 50 9150 14 HOH HOH . 
E 3 HOH A 51 9151 39 HOH HOH . 
E 3 HOH A 52 9152 123 HOH HOH . 
E 3 HOH A 53 9153 46 HOH HOH . 
E 3 HOH A 54 9154 126 HOH HOH . 
E 3 HOH A 55 9155 65 HOH HOH . 
E 3 HOH A 56 9156 77 HOH HOH . 
E 3 HOH A 57 9157 34 HOH HOH . 
E 3 HOH A 58 9158 99 HOH HOH . 
E 3 HOH A 59 9159 88 HOH HOH . 
E 3 HOH A 60 9160 12 HOH HOH . 
E 3 HOH A 61 9161 75 HOH HOH . 
E 3 HOH A 62 9162 146 HOH HOH . 
E 3 HOH A 63 9163 64 HOH HOH . 
E 3 HOH A 64 9164 72 HOH HOH . 
E 3 HOH A 65 9165 37 HOH HOH . 
E 3 HOH A 66 9166 58 HOH HOH . 
E 3 HOH A 67 9167 20 HOH HOH . 
E 3 HOH A 68 9168 61 HOH HOH . 
E 3 HOH A 69 9169 33 HOH HOH . 
E 3 HOH A 70 9170 124 HOH HOH . 
E 3 HOH A 71 9171 54 HOH HOH . 
E 3 HOH A 72 9172 116 HOH HOH . 
E 3 HOH A 73 9173 51 HOH HOH . 
E 3 HOH A 74 9174 19 HOH HOH . 
E 3 HOH A 75 9175 98 HOH HOH . 
E 3 HOH A 76 9176 127 HOH HOH . 
E 3 HOH A 77 9177 1 HOH HOH . 
E 3 HOH A 78 9178 137 HOH HOH . 
E 3 HOH A 79 9179 121 HOH HOH . 
E 3 HOH A 80 9180 92 HOH HOH . 
E 3 HOH A 81 9181 143 HOH HOH . 
E 3 HOH A 82 9182 24 HOH HOH . 
E 3 HOH A 83 9183 138 HOH HOH . 
E 3 HOH A 84 9184 117 HOH HOH . 
E 3 HOH A 85 9185 152 HOH HOH . 
E 3 HOH A 86 9186 130 HOH HOH . 
E 3 HOH A 87 9187 48 HOH HOH . 
E 3 HOH A 88 9188 134 HOH HOH . 
E 3 HOH A 89 9189 157 HOH HOH . 
E 3 HOH A 90 9190 172 HOH HOH . 
F 3 HOH B 1 9101 44 HOH HOH . 
F 3 HOH B 2 9102 162 HOH HOH . 
F 3 HOH B 3 9103 136 HOH HOH . 
F 3 HOH B 4 9104 66 HOH HOH . 
F 3 HOH B 5 9105 38 HOH HOH . 
F 3 HOH B 6 9106 62 HOH HOH . 
F 3 HOH B 7 9107 95 HOH HOH . 
F 3 HOH B 8 9108 17 HOH HOH . 
F 3 HOH B 9 9109 8 HOH HOH . 
F 3 HOH B 10 9110 27 HOH HOH . 
F 3 HOH B 11 9111 79 HOH HOH . 
F 3 HOH B 12 9112 86 HOH HOH . 
F 3 HOH B 13 9113 82 HOH HOH . 
F 3 HOH B 14 9114 148 HOH HOH . 
F 3 HOH B 15 9115 30 HOH HOH . 
F 3 HOH B 16 9116 49 HOH HOH . 
F 3 HOH B 17 9117 50 HOH HOH . 
F 3 HOH B 18 9118 120 HOH HOH . 
F 3 HOH B 19 9119 94 HOH HOH . 
F 3 HOH B 20 9120 118 HOH HOH . 
F 3 HOH B 21 9121 40 HOH HOH . 
F 3 HOH B 22 9122 18 HOH HOH . 
F 3 HOH B 23 9123 174 HOH HOH . 
F 3 HOH B 24 9124 159 HOH HOH . 
F 3 HOH B 25 9125 97 HOH HOH . 
F 3 HOH B 26 9126 91 HOH HOH . 
F 3 HOH B 27 9127 53 HOH HOH . 
F 3 HOH B 28 9128 67 HOH HOH . 
F 3 HOH B 29 9129 10 HOH HOH . 
F 3 HOH B 30 9130 161 HOH HOH . 
F 3 HOH B 31 9131 100 HOH HOH . 
F 3 HOH B 32 9132 59 HOH HOH . 
F 3 HOH B 33 9133 52 HOH HOH . 
F 3 HOH B 34 9134 168 HOH HOH . 
F 3 HOH B 35 9135 25 HOH HOH . 
F 3 HOH B 36 9136 35 HOH HOH . 
F 3 HOH B 37 9137 128 HOH HOH . 
F 3 HOH B 38 9138 145 HOH HOH . 
F 3 HOH B 39 9139 7 HOH HOH . 
F 3 HOH B 40 9140 11 HOH HOH . 
F 3 HOH B 41 9141 167 HOH HOH . 
F 3 HOH B 42 9142 122 HOH HOH . 
F 3 HOH B 43 9143 104 HOH HOH . 
F 3 HOH B 44 9144 151 HOH HOH . 
F 3 HOH B 45 9145 129 HOH HOH . 
F 3 HOH B 46 9146 60 HOH HOH . 
F 3 HOH B 47 9147 41 HOH HOH . 
F 3 HOH B 48 9148 135 HOH HOH . 
F 3 HOH B 49 9149 163 HOH HOH . 
F 3 HOH B 50 9150 142 HOH HOH . 
F 3 HOH B 51 9151 144 HOH HOH . 
F 3 HOH B 52 9152 43 HOH HOH . 
F 3 HOH B 53 9153 109 HOH HOH . 
F 3 HOH B 54 9154 153 HOH HOH . 
F 3 HOH B 55 9155 56 HOH HOH . 
F 3 HOH B 56 9156 169 HOH HOH . 
F 3 HOH B 57 9157 107 HOH HOH . 
F 3 HOH B 58 9158 31 HOH HOH . 
F 3 HOH B 59 9159 89 HOH HOH . 
F 3 HOH B 60 9160 71 HOH HOH . 
F 3 HOH B 61 9161 108 HOH HOH . 
F 3 HOH B 62 9162 9 HOH HOH . 
F 3 HOH B 63 9163 90 HOH HOH . 
F 3 HOH B 64 9164 93 HOH HOH . 
F 3 HOH B 65 9165 26 HOH HOH . 
F 3 HOH B 66 9166 101 HOH HOH . 
F 3 HOH B 67 9167 149 HOH HOH . 
F 3 HOH B 68 9168 29 HOH HOH . 
F 3 HOH B 69 9169 15 HOH HOH . 
F 3 HOH B 70 9170 2 HOH HOH . 
F 3 HOH B 71 9171 156 HOH HOH . 
F 3 HOH B 72 9172 83 HOH HOH . 
F 3 HOH B 73 9173 173 HOH HOH . 
F 3 HOH B 74 9174 3 HOH HOH . 
F 3 HOH B 75 9175 141 HOH HOH . 
F 3 HOH B 76 9176 154 HOH HOH . 
F 3 HOH B 77 9177 81 HOH HOH . 
F 3 HOH B 78 9178 132 HOH HOH . 
F 3 HOH B 79 9179 160 HOH HOH . 
F 3 HOH B 80 9180 150 HOH HOH . 
F 3 HOH B 81 9181 170 HOH HOH . 
F 3 HOH B 82 9182 155 HOH HOH . 
F 3 HOH B 83 9183 139 HOH HOH . 
F 3 HOH B 84 9184 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N3 7YS . . . D 2 -2.744 21.613 -18.146 1 30.71 ? N3 7YS 9001 B 1 
HETATM 2 C C4 7YS . . . D 2 -2.416 20.703 -19.078 1 29.92 ? C4 7YS 9001 B 1 
HETATM 3 C C5 7YS . . . D 2 -3.161 19.544 -19.286 1 27.67 ? C5 7YS 9001 B 1 
HETATM 4 C C7 7YS . . . D 2 -2.725 18.463 -20.227 1 27.98 ? C7 7YS 9001 B 1 
HETATM 5 C C8 7YS . . . D 2 -1.92 18.601 -21.452 1 29.54 ? C8 7YS 9001 B 1 
HETATM 6 C C15 7YS . . . D 2 -5.819 16.451 -16.988 1 31.34 ? C15 7YS 9001 B 1 
HETATM 7 C C17 7YS . . . D 2 -6.545 18.9 -17.046 1 29.78 ? C17 7YS 9001 B 1 
HETATM 8 C C20 7YS . . . D 2 -5.63 17.672 -14.95 1 34.56 ? C20 7YS 9001 B 1 
HETATM 9 C C21 7YS . . . D 2 -5.127 16.538 -14.318 1 32.57 ? C21 7YS 9001 B 1 
HETATM 10 C C22 7YS . . . D 2 -4.995 15.35 -14.994 1 31.6 ? C22 7YS 9001 B 1 
HETATM 11 C C28 7YS . . . D 2 -2.277 15.099 -21.531 1 31.12 ? C28 7YS 9001 B 1 
HETATM 12 C C1 7YS . . . D 2 -4.607 20.228 -17.63 1 30.44 ? C1 7YS 9001 B 1 
HETATM 13 C C2 7YS . . . D 2 -3.827 21.411 -17.361 1 30.08 ? C2 7YS 9001 B 1 
HETATM 14 N N6 7YS . . . D 2 -4.277 19.35 -18.567 1 28.61 ? N6 7YS 9001 B 1 
HETATM 15 N N9 7YS . . . D 2 -1.768 17.42 -22.02 1 30.67 ? N9 7YS 9001 B 1 
HETATM 16 N N10 7YS . . . D 2 -2.406 16.52 -21.206 1 29.94 ? N10 7YS 9001 B 1 
HETATM 17 C C11 7YS . . . D 2 -3.008 17.103 -20.137 1 27.67 ? C11 7YS 9001 B 1 
HETATM 18 C C12 7YS . . . D 2 -3.836 16.345 -19.106 1 23.17 ? C12 7YS 9001 B 1 
HETATM 19 N N13 7YS . . . D 2 -5.267 16.238 -19.371 1 25.8 ? N13 7YS 9001 B 1 
HETATM 20 C C14 7YS . . . D 2 -6.225 16.322 -18.432 1 27.07 ? C14 7YS 9001 B 1 
HETATM 21 C C16 7YS . . . D 2 -5.979 17.666 -16.303 1 30.65 ? C16 7YS 9001 B 1 
HETATM 22 O O18 7YS . . . D 2 -5.7 20.034 -16.856 1 29.02 ? O18 7YS 9001 B 1 
HETATM 23 C C19 7YS . . . D 2 -7.956 19.272 -16.636 1 28.45 ? C19 7YS 9001 B 1 
HETATM 24 C C23 7YS . . . D 2 -5.342 15.306 -16.332 1 31.74 ? C23 7YS 9001 B 1 
HETATM 25 F F24 7YS . . . D 2 -4.669 16.619 -13.051 1 30.01 ? F24 7YS 9001 B 1 
HETATM 26 CL CL25 7YS . . . D 2 -5.842 19.086 -13.985 1 41.86 ? CL25 7YS 9001 B 1 
HETATM 27 O O26 7YS . . . D 2 -7.41 16.326 -18.708 1 27.11 ? O26 7YS 9001 B 1 
HETATM 28 C C27 7YS . . . D 2 -5.674 15.968 -20.746 1 25.4 ? C27 7YS 9001 B 1 
HETATM 29 C C29 7YS . . . D 2 -0.928 14.536 -21.131 1 30.05 ? C29 7YS 9001 B 1 
HETATM 30 O O30 7YS . . . D 2 -0.744 14.711 -19.743 1 28.56 ? O30 7YS 9001 B 1 
HETATM 31 C C31 7YS . . . D 2 -1.275 19.801 -22.068 1 25.15 ? C31 7YS 9001 B 1 
HETATM 32 N N32 7YS . . . D 2 -4.077 22.298 -16.39 1 30.18 ? N32 7YS 9001 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           368 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#