data_5U6N # _model_server_result.job_id IQLRBoFdPqbLeNB9jOPfNg _model_server_result.datetime_utc '2024-11-24 17:57:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":504}' # _entry.id 5U6N # _exptl.entry_id 5U6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 138.121 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYBENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U6N _cell.length_a 65.18 _cell.length_b 87.562 _cell.length_c 163.018 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,L 1 1 B,D,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 K N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 BGC _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O3 _pdbx_entity_branch_link.leaving_atom_id_2 HO3 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C BGC 1 C 1 BGC A 502 LB2 2 n C BGC 2 C 2 BGC A 502 LB2 2 n D BGC 1 D 1 BGC B 502 LB2 2 n D BGC 2 D 2 BGC B 502 LB2 # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OH TYR 177 A TYR 177 1_555 F C1 BGC . A BGC 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale2 A OH TYR 180 A TYR 180 1_555 C C1 BGC . C BGC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale3 B OH TYR 177 B TYR 177 1_555 I C1 BGC . B BGC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale4 B OH TYR 180 B TYR 180 1_555 D C1 BGC . D BGC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? covale ? covale5 C O3 BGC . C BGC 1 1_555 C C1 BGC . C BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 sing covale ? covale6 D O3 BGC . D BGC 1 1_555 D C1 BGC . D BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 sing # _chem_comp.formula 'C7 H6 O3' _chem_comp.formula_weight 138.121 _chem_comp.id SAL _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYBENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'SALICYLIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1' O1' SAL doub 301 n n C1' O2' SAL sing 302 n n C1' C1 SAL sing 303 n n O2' HO2' SAL sing 304 n n C1 C2 SAL sing 305 n y C1 C6 SAL doub 306 n y C2 C3 SAL doub 307 n y C2 O2 SAL sing 308 n n C3 C4 SAL sing 309 n y C3 H3 SAL sing 310 n n C4 C5 SAL doub 311 n y C4 H4 SAL sing 312 n n C5 C6 SAL sing 313 n y C5 H5 SAL sing 314 n n C6 H6 SAL sing 315 n n O2 HO2 SAL sing 316 n n # _atom_sites.entry_id 5U6N _atom_sites.fract_transf_matrix[1][1] 0.015342 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GLN A 1 501 447 GLN GLN . F 4 BGC A 1 502 501 BGC BGC . G 5 UDP A 1 504 2 UDP UDP . H 6 SAL A 1 505 3 SAL SAL . I 4 BGC B 1 501 501 BGC BGC . J 5 UDP B 1 503 1 UDP UDP . K 6 SAL B 1 504 4 SAL SAL . L 7 HOH A 1 601 20 HOH HOH . L 7 HOH A 2 602 36 HOH HOH . L 7 HOH A 3 603 34 HOH HOH . L 7 HOH A 4 604 19 HOH HOH . L 7 HOH A 5 605 2 HOH HOH . L 7 HOH A 6 606 43 HOH HOH . L 7 HOH A 7 607 45 HOH HOH . L 7 HOH A 8 608 53 HOH HOH . L 7 HOH A 9 609 23 HOH HOH . L 7 HOH A 10 610 12 HOH HOH . L 7 HOH A 11 611 54 HOH HOH . L 7 HOH A 12 612 24 HOH HOH . L 7 HOH A 13 613 10 HOH HOH . L 7 HOH A 14 614 35 HOH HOH . L 7 HOH A 15 615 31 HOH HOH . L 7 HOH A 16 616 56 HOH HOH . L 7 HOH A 17 617 27 HOH HOH . L 7 HOH A 18 618 13 HOH HOH . L 7 HOH A 19 619 63 HOH HOH . L 7 HOH A 20 620 22 HOH HOH . L 7 HOH A 21 621 66 HOH HOH . L 7 HOH A 22 622 62 HOH HOH . L 7 HOH A 23 623 29 HOH HOH . L 7 HOH A 24 624 59 HOH HOH . L 7 HOH A 25 625 65 HOH HOH . M 7 HOH B 1 601 30 HOH HOH . M 7 HOH B 2 602 51 HOH HOH . M 7 HOH B 3 603 32 HOH HOH . M 7 HOH B 4 604 7 HOH HOH . M 7 HOH B 5 605 41 HOH HOH . M 7 HOH B 6 606 55 HOH HOH . M 7 HOH B 7 607 18 HOH HOH . M 7 HOH B 8 608 4 HOH HOH . M 7 HOH B 9 609 37 HOH HOH . M 7 HOH B 10 610 57 HOH HOH . M 7 HOH B 11 611 1 HOH HOH . M 7 HOH B 12 612 33 HOH HOH . M 7 HOH B 13 613 64 HOH HOH . M 7 HOH B 14 614 5 HOH HOH . M 7 HOH B 15 615 38 HOH HOH . M 7 HOH B 16 616 26 HOH HOH . M 7 HOH B 17 617 6 HOH HOH . M 7 HOH B 18 618 11 HOH HOH . M 7 HOH B 19 619 58 HOH HOH . M 7 HOH B 20 620 9 HOH HOH . M 7 HOH B 21 621 40 HOH HOH . M 7 HOH B 22 622 42 HOH HOH . M 7 HOH B 23 623 21 HOH HOH . M 7 HOH B 24 624 49 HOH HOH . M 7 HOH B 25 625 39 HOH HOH . M 7 HOH B 26 626 25 HOH HOH . M 7 HOH B 27 627 14 HOH HOH . M 7 HOH B 28 628 15 HOH HOH . M 7 HOH B 29 629 67 HOH HOH . M 7 HOH B 30 630 46 HOH HOH . M 7 HOH B 31 631 3 HOH HOH . M 7 HOH B 32 632 28 HOH HOH . M 7 HOH B 33 633 52 HOH HOH . M 7 HOH B 34 634 44 HOH HOH . M 7 HOH B 35 635 60 HOH HOH . M 7 HOH B 36 636 8 HOH HOH . M 7 HOH B 37 637 17 HOH HOH . M 7 HOH B 38 638 16 HOH HOH . M 7 HOH B 39 639 47 HOH HOH . M 7 HOH B 40 640 61 HOH HOH . M 7 HOH B 41 641 48 HOH HOH . M 7 HOH B 42 642 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' SAL . . . K 6 48.554 77.675 80.676 1 79.53 ? C1' SAL 504 B 1 HETATM 2 O O1' SAL . . . K 6 48.601 77.042 79.492 1 58.71 ? O1' SAL 504 B 1 HETATM 3 O O2' SAL . . . K 6 48.391 78.886 80.727 1 81.62 ? O2' SAL 504 B 1 HETATM 4 C C1 SAL . . . K 6 48.703 76.945 82.066 1 84.79 ? C1 SAL 504 B 1 HETATM 5 C C2 SAL . . . K 6 48.583 75.544 82.242 1 86.39 ? C2 SAL 504 B 1 HETATM 6 C C3 SAL . . . K 6 48.728 74.991 83.548 1 76.15 ? C3 SAL 504 B 1 HETATM 7 C C4 SAL . . . K 6 48.981 75.783 84.622 1 75.08 ? C4 SAL 504 B 1 HETATM 8 C C5 SAL . . . K 6 49.087 77.146 84.457 1 78.88 ? C5 SAL 504 B 1 HETATM 9 C C6 SAL . . . K 6 48.94 77.725 83.138 1 92.04 ? C6 SAL 504 B 1 HETATM 10 O O2 SAL . . . K 6 48.332 74.669 81.159 1 82.1 ? O2 SAL 504 B 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 10 #