data_5U6P # _model_server_result.job_id 0OqLZ3u2dGOwTb5ZLM0Uiw _model_server_result.datetime_utc '2025-02-05 07:45:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u6p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":901}' # _entry.id 5U6P # _exptl.entry_id 5U6P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.206 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U6P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U6P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 5U6P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 CMP A 1 901 901 CMP CMP . J 3 CMP B 1 901 901 CMP CMP . K 3 CMP C 1 901 901 CMP CMP . L 3 CMP D 1 901 901 CMP CMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . L 3 180.359 166.875 201.843 1 327.61 ? P CMP 901 D 1 HETATM 2 O O1P CMP . . . L 3 179.086 166.15 201.486 1 337.12 ? O1P CMP 901 D 1 HETATM 3 O O2P CMP . . . L 3 180.483 167.529 203.198 1 326.09 ? O2P CMP 901 D 1 HETATM 4 O O5' CMP . . . L 3 180.613 168.026 200.731 1 326.66 ? O5' CMP 901 D 1 HETATM 5 C C5' CMP . . . L 3 181.909 168.371 200.225 1 326.26 ? C5' CMP 901 D 1 HETATM 6 C C4' CMP . . . L 3 182.681 167.09 199.981 1 327.85 ? C4' CMP 901 D 1 HETATM 7 O O4' CMP . . . L 3 184.007 167.247 199.479 1 329.82 ? O4' CMP 901 D 1 HETATM 8 C C3' CMP . . . L 3 182.841 166.354 201.292 1 330.55 ? C3' CMP 901 D 1 HETATM 9 O O3' CMP . . . L 3 181.574 165.825 201.656 1 327.81 ? O3' CMP 901 D 1 HETATM 10 C C2' CMP . . . L 3 183.955 165.378 200.977 1 337.97 ? C2' CMP 901 D 1 HETATM 11 O O2' CMP . . . L 3 183.449 164.144 200.456 1 341.52 ? O2' CMP 901 D 1 HETATM 12 C C1' CMP . . . L 3 184.784 166.131 199.937 1 338.38 ? C1' CMP 901 D 1 HETATM 13 N N9 CMP . . . L 3 186.035 166.621 200.56 1 343.69 ? N9 CMP 901 D 1 HETATM 14 C C8 CMP . . . L 3 186.118 167.576 201.508 1 349.09 ? C8 CMP 901 D 1 HETATM 15 N N7 CMP . . . L 3 187.41 167.783 201.868 1 354.06 ? N7 CMP 901 D 1 HETATM 16 C C5 CMP . . . L 3 188.171 166.948 201.142 1 352.82 ? C5 CMP 901 D 1 HETATM 17 C C6 CMP . . . L 3 189.619 166.65 201.025 1 355.28 ? C6 CMP 901 D 1 HETATM 18 N N6 CMP . . . L 3 190.517 167.315 201.785 1 359.02 ? N6 CMP 901 D 1 HETATM 19 N N1 CMP . . . L 3 190.005 165.697 200.139 1 350.85 ? N1 CMP 901 D 1 HETATM 20 C C2 CMP . . . L 3 189.113 165.025 199.374 1 346.77 ? C2 CMP 901 D 1 HETATM 21 N N3 CMP . . . L 3 187.782 165.25 199.433 1 345.49 ? N3 CMP 901 D 1 HETATM 22 C C4 CMP . . . L 3 187.26 166.181 200.278 1 347.71 ? C4 CMP 901 D 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #