data_5U6V
#
_model_server_result.job_id            wfUkrpuqY6kjYpbbHpY0wQ 
_model_server_result.datetime_utc      '2024-11-21 23:44:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5u6v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":504}' 
#
_entry.id    5U6V 
#
_exptl.entry_id    5U6V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5U6V 
_cell.length_a            52.617 
_cell.length_b            71.743 
_cell.length_c            31.935 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5U6V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 135 n n 
C1 C2 EDO sing 136 n n 
C1 H11 EDO sing 137 n n 
C1 H12 EDO sing 138 n n 
O1 HO1 EDO sing 139 n n 
C2 O2 EDO sing 140 n n 
C2 H21 EDO sing 141 n n 
C2 H22 EDO sing 142 n n 
O2 HO2 EDO sing 143 n n 
#
_atom_sites.entry_id                     5U6V 
_atom_sites.fract_transf_matrix[1][1]    0.019005 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013939 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031314 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 7WY A 1 501 1 7WY LIG . 
C 3 EDO A 1 502 1 EDO EDO . 
D 3 EDO A 1 503 2 EDO EDO . 
E 3 EDO A 1 504 3 EDO EDO . 
F 3 EDO A 1 505 4 EDO EDO . 
G 3 EDO A 1 506 5 EDO EDO . 
H 4 HOH A 1 601 133 HOH HOH . 
H 4 HOH A 2 602 118 HOH HOH . 
H 4 HOH A 3 603 25 HOH HOH . 
H 4 HOH A 4 604 3 HOH HOH . 
H 4 HOH A 5 605 13 HOH HOH . 
H 4 HOH A 6 606 35 HOH HOH . 
H 4 HOH A 7 607 100 HOH HOH . 
H 4 HOH A 8 608 17 HOH HOH . 
H 4 HOH A 9 609 128 HOH HOH . 
H 4 HOH A 10 610 7 HOH HOH . 
H 4 HOH A 11 611 8 HOH HOH . 
H 4 HOH A 12 612 38 HOH HOH . 
H 4 HOH A 13 613 18 HOH HOH . 
H 4 HOH A 14 614 16 HOH HOH . 
H 4 HOH A 15 615 140 HOH HOH . 
H 4 HOH A 16 616 56 HOH HOH . 
H 4 HOH A 17 617 15 HOH HOH . 
H 4 HOH A 18 618 39 HOH HOH . 
H 4 HOH A 19 619 76 HOH HOH . 
H 4 HOH A 20 620 61 HOH HOH . 
H 4 HOH A 21 621 116 HOH HOH . 
H 4 HOH A 22 622 131 HOH HOH . 
H 4 HOH A 23 623 42 HOH HOH . 
H 4 HOH A 24 624 72 HOH HOH . 
H 4 HOH A 25 625 12 HOH HOH . 
H 4 HOH A 26 626 111 HOH HOH . 
H 4 HOH A 27 627 36 HOH HOH . 
H 4 HOH A 28 628 45 HOH HOH . 
H 4 HOH A 29 629 10 HOH HOH . 
H 4 HOH A 30 630 47 HOH HOH . 
H 4 HOH A 31 631 27 HOH HOH . 
H 4 HOH A 32 632 144 HOH HOH . 
H 4 HOH A 33 633 124 HOH HOH . 
H 4 HOH A 34 634 20 HOH HOH . 
H 4 HOH A 35 635 37 HOH HOH . 
H 4 HOH A 36 636 65 HOH HOH . 
H 4 HOH A 37 637 2 HOH HOH . 
H 4 HOH A 38 638 121 HOH HOH . 
H 4 HOH A 39 639 117 HOH HOH . 
H 4 HOH A 40 640 24 HOH HOH . 
H 4 HOH A 41 641 51 HOH HOH . 
H 4 HOH A 42 642 6 HOH HOH . 
H 4 HOH A 43 643 99 HOH HOH . 
H 4 HOH A 44 644 83 HOH HOH . 
H 4 HOH A 45 645 127 HOH HOH . 
H 4 HOH A 46 646 23 HOH HOH . 
H 4 HOH A 47 647 119 HOH HOH . 
H 4 HOH A 48 648 43 HOH HOH . 
H 4 HOH A 49 649 71 HOH HOH . 
H 4 HOH A 50 650 77 HOH HOH . 
H 4 HOH A 51 651 95 HOH HOH . 
H 4 HOH A 52 652 97 HOH HOH . 
H 4 HOH A 53 653 62 HOH HOH . 
H 4 HOH A 54 654 9 HOH HOH . 
H 4 HOH A 55 655 1 HOH HOH . 
H 4 HOH A 56 656 22 HOH HOH . 
H 4 HOH A 57 657 57 HOH HOH . 
H 4 HOH A 58 658 14 HOH HOH . 
H 4 HOH A 59 659 91 HOH HOH . 
H 4 HOH A 60 660 55 HOH HOH . 
H 4 HOH A 61 661 34 HOH HOH . 
H 4 HOH A 62 662 32 HOH HOH . 
H 4 HOH A 63 663 28 HOH HOH . 
H 4 HOH A 64 664 104 HOH HOH . 
H 4 HOH A 65 665 11 HOH HOH . 
H 4 HOH A 66 666 78 HOH HOH . 
H 4 HOH A 67 667 41 HOH HOH . 
H 4 HOH A 68 668 5 HOH HOH . 
H 4 HOH A 69 669 21 HOH HOH . 
H 4 HOH A 70 670 49 HOH HOH . 
H 4 HOH A 71 671 33 HOH HOH . 
H 4 HOH A 72 672 54 HOH HOH . 
H 4 HOH A 73 673 87 HOH HOH . 
H 4 HOH A 74 674 29 HOH HOH . 
H 4 HOH A 75 675 143 HOH HOH . 
H 4 HOH A 76 676 81 HOH HOH . 
H 4 HOH A 77 677 60 HOH HOH . 
H 4 HOH A 78 678 46 HOH HOH . 
H 4 HOH A 79 679 48 HOH HOH . 
H 4 HOH A 80 680 26 HOH HOH . 
H 4 HOH A 81 681 4 HOH HOH . 
H 4 HOH A 82 682 52 HOH HOH . 
H 4 HOH A 83 683 90 HOH HOH . 
H 4 HOH A 84 684 44 HOH HOH . 
H 4 HOH A 85 685 63 HOH HOH . 
H 4 HOH A 86 686 19 HOH HOH . 
H 4 HOH A 87 687 96 HOH HOH . 
H 4 HOH A 88 688 31 HOH HOH . 
H 4 HOH A 89 689 98 HOH HOH . 
H 4 HOH A 90 690 88 HOH HOH . 
H 4 HOH A 91 691 70 HOH HOH . 
H 4 HOH A 92 692 122 HOH HOH . 
H 4 HOH A 93 693 110 HOH HOH . 
H 4 HOH A 94 694 50 HOH HOH . 
H 4 HOH A 95 695 84 HOH HOH . 
H 4 HOH A 96 696 94 HOH HOH . 
H 4 HOH A 97 697 114 HOH HOH . 
H 4 HOH A 98 698 141 HOH HOH . 
H 4 HOH A 99 699 101 HOH HOH . 
H 4 HOH A 100 700 138 HOH HOH . 
H 4 HOH A 101 701 92 HOH HOH . 
H 4 HOH A 102 702 142 HOH HOH . 
H 4 HOH A 103 703 123 HOH HOH . 
H 4 HOH A 104 704 125 HOH HOH . 
H 4 HOH A 105 705 66 HOH HOH . 
H 4 HOH A 106 706 145 HOH HOH . 
H 4 HOH A 107 707 74 HOH HOH . 
H 4 HOH A 108 708 79 HOH HOH . 
H 4 HOH A 109 709 64 HOH HOH . 
H 4 HOH A 110 710 139 HOH HOH . 
H 4 HOH A 111 711 120 HOH HOH . 
H 4 HOH A 112 712 58 HOH HOH . 
H 4 HOH A 113 713 147 HOH HOH . 
H 4 HOH A 114 714 73 HOH HOH . 
H 4 HOH A 115 715 69 HOH HOH . 
H 4 HOH A 116 716 85 HOH HOH . 
H 4 HOH A 117 717 135 HOH HOH . 
H 4 HOH A 118 718 126 HOH HOH . 
H 4 HOH A 119 719 89 HOH HOH . 
H 4 HOH A 120 720 40 HOH HOH . 
H 4 HOH A 121 721 102 HOH HOH . 
H 4 HOH A 122 722 86 HOH HOH . 
H 4 HOH A 123 723 53 HOH HOH . 
H 4 HOH A 124 724 30 HOH HOH . 
H 4 HOH A 125 725 136 HOH HOH . 
H 4 HOH A 126 726 82 HOH HOH . 
H 4 HOH A 127 727 68 HOH HOH . 
H 4 HOH A 128 728 146 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 3 -14.165 -17.878 8.582 1 34.79 ? C1 EDO 504 A 1 
HETATM 2 O O1 EDO . . . E 3 -15.493 -18.367 8.797 1 43.39 ? O1 EDO 504 A 1 
HETATM 3 C C2 EDO . . . E 3 -13.319 -18.093 9.83 1 18.24 ? C2 EDO 504 A 1 
HETATM 4 O O2 EDO . . . E 3 -12.754 -19.411 9.811 1 21.97 ? O2 EDO 504 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#