data_5U77 # _model_server_result.job_id ZXn7UVdMqdMmh5KNGxBFiQ _model_server_result.datetime_utc '2024-10-28 13:24:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u77 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5U77 # _exptl.entry_id 5U77 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 212.287 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-hydroxyethyl)-N,N-dimethyl-3-sulfopropan-1-aminium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5U77 _cell.length_a 57.079 _cell.length_b 57.079 _cell.length_c 154.949 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U77 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H18 N O4 S 1' _chem_comp.formula_weight 212.287 _chem_comp.id NDB _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-hydroxyethyl)-N,N-dimethyl-3-sulfopropan-1-aminium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA NAL NDB sing 241 n n CAA HAA NDB sing 242 n n CAA HAAA NDB sing 243 n n CAA HAAB NDB sing 244 n n CAB NAL NDB sing 245 n n CAB HAB NDB sing 246 n n CAB HABA NDB sing 247 n n CAB HABB NDB sing 248 n n OAC SAM NDB doub 249 n n OAD SAM NDB sing 250 n n OAE CAG NDB sing 251 n n OAE HOAE NDB sing 252 n n OAF SAM NDB doub 253 n n CAG CAI NDB sing 254 n n CAG HAG NDB sing 255 n n CAG HAGA NDB sing 256 n n CAH CAJ NDB sing 257 n n CAH CAK NDB sing 258 n n CAH HAH NDB sing 259 n n CAH HAHA NDB sing 260 n n CAI NAL NDB sing 261 n n CAI HAI NDB sing 262 n n CAI HAIA NDB sing 263 n n CAJ NAL NDB sing 264 n n CAJ HAJ NDB sing 265 n n CAJ HAJA NDB sing 266 n n CAK SAM NDB sing 267 n n CAK HAK NDB sing 268 n n CAK HAKA NDB sing 269 n n OAD H18 NDB sing 270 n n # _atom_sites.entry_id 5U77 _atom_sites.fract_transf_matrix[1][1] 0.017519 _atom_sites.fract_transf_matrix[1][2] 0.010115 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDB A 1 201 500 NDB NDS . C 3 FMT A 1 202 284 FMT FMT . D 4 HOH A 1 301 15 HOH HOH . D 4 HOH A 2 302 17 HOH HOH . D 4 HOH A 3 303 10 HOH HOH . D 4 HOH A 4 304 20 HOH HOH . D 4 HOH A 5 305 16 HOH HOH . D 4 HOH A 6 306 21 HOH HOH . D 4 HOH A 7 307 8 HOH HOH . D 4 HOH A 8 308 3 HOH HOH . D 4 HOH A 9 309 14 HOH HOH . D 4 HOH A 10 310 19 HOH HOH . D 4 HOH A 11 311 7 HOH HOH . D 4 HOH A 12 312 12 HOH HOH . D 4 HOH A 13 313 6 HOH HOH . D 4 HOH A 14 314 2 HOH HOH . D 4 HOH A 15 315 5 HOH HOH . D 4 HOH A 16 316 1 HOH HOH . D 4 HOH A 17 317 9 HOH HOH . D 4 HOH A 18 318 13 HOH HOH . D 4 HOH A 19 319 4 HOH HOH . D 4 HOH A 20 320 11 HOH HOH . D 4 HOH A 21 321 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA NDB . . . B 2 5.61 5.177 -17.362 1 30.12 ? CAA NDB 201 A 1 HETATM 2 C CAB NDB . . . B 2 6.785 6.24 -15.858 1 46.42 ? CAB NDB 201 A 1 HETATM 3 O OAC NDB . . . B 2 1.666 9.139 -17.025 1 49.59 ? OAC NDB 201 A 1 HETATM 4 O OAD NDB . . . B 2 2.165 11.047 -15.799 1 42.76 ? OAD NDB 201 A 1 HETATM 5 C CAG NDB . . . B 2 5.209 5.818 -13.778 1 42.8 ? CAG NDB 201 A 1 HETATM 6 C CAH NDB . . . B 2 5.073 8.547 -15.849 1 38.95 ? CAH NDB 201 A 1 HETATM 7 C CAI NDB . . . B 2 4.576 5.639 -15.199 1 58.59 ? CAI NDB 201 A 1 HETATM 8 C CAJ NDB . . . B 2 5.059 7.366 -16.845 1 50.29 ? CAJ NDB 201 A 1 HETATM 9 C CAK NDB . . . B 2 4.194 9.619 -16.478 1 38.54 ? CAK NDB 201 A 1 HETATM 10 N NAL NDB . . . B 2 5.457 6.09 -16.257 1 25.99 ? NAL NDB 201 A 1 HETATM 11 S SAM NDB . . . B 2 2.541 9.573 -15.865 1 68.55 ? SAM NDB 201 A 1 HETATM 12 H HAA NDB . . . B 2 4.737 5.002 -17.763 1 36.15 ? HAA NDB 201 A 1 HETATM 13 H HAAA NDB . . . B 2 6.201 5.572 -18.031 1 36.15 ? HAAA NDB 201 A 1 HETATM 14 H HAAB NDB . . . B 2 5.995 4.34 -17.041 1 36.15 ? HAAB NDB 201 A 1 HETATM 15 H HAB NDB . . . B 2 6.981 5.61 -15.139 1 55.7 ? HAB NDB 201 A 1 HETATM 16 H HABA NDB . . . B 2 7.374 6.064 -16.615 1 55.7 ? HABA NDB 201 A 1 HETATM 17 H HABB NDB . . . B 2 6.927 7.152 -15.539 1 55.7 ? HABB NDB 201 A 1 HETATM 18 H HAH NDB . . . B 2 4.703 8.268 -14.99 1 46.74 ? HAH NDB 201 A 1 HETATM 19 H HAHA NDB . . . B 2 5.982 8.881 -15.734 1 46.74 ? HAHA NDB 201 A 1 HETATM 20 H HAI NDB . . . B 2 4.373 4.695 -15.337 1 70.31 ? HAI NDB 201 A 1 HETATM 21 H HAIA NDB . . . B 2 3.745 6.15 -15.241 1 70.31 ? HAIA NDB 201 A 1 HETATM 22 H HAJ NDB . . . B 2 5.668 7.573 -17.579 1 60.34 ? HAJ NDB 201 A 1 HETATM 23 H HAJA NDB . . . B 2 4.157 7.275 -17.205 1 60.34 ? HAJA NDB 201 A 1 HETATM 24 H HAK NDB . . . B 2 4.578 10.495 -16.285 1 46.25 ? HAK NDB 201 A 1 HETATM 25 H HAKA NDB . . . B 2 4.177 9.487 -17.445 1 46.25 ? HAKA NDB 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #