data_5U9J
#
_model_server_result.job_id            cpbSRIK_ljelQ-GtYW2ABw 
_model_server_result.datetime_utc      '2024-11-07 19:08:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5u9j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":303}' 
#
_entry.id    5U9J 
#
_exptl.entry_id    5U9J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.09 
_cell.angle_gamma         90 
_cell.entry_id            5U9J 
_cell.length_a            69.34 
_cell.length_b            51.17 
_cell.length_c            106.97 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5U9J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,G 1 1 
B,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 160 A GLU 152 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? 
metalc ? metalc2 E NA NA . A NA 303 1_555 B O ARG 54 B ARG 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? 
metalc ? metalc3 E NA NA . A NA 303 1_555 H O HOH . B HOH 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5U9J 
_atom_sites.fract_transf_matrix[1][1]    0.014422 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00078 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019543 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009362 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GER A 1 301 301 GER GRG . 
D 3 IPA A 1 302 302 IPA IPA . 
E 4 NA A 1 303 1 NA NA . 
F 2 GER B 1 301 301 GER GRG . 
G 5 HOH A 1 401 79 HOH HOH . 
G 5 HOH A 2 402 127 HOH HOH . 
G 5 HOH A 3 403 134 HOH HOH . 
G 5 HOH A 4 404 78 HOH HOH . 
G 5 HOH A 5 405 11 HOH HOH . 
G 5 HOH A 6 406 107 HOH HOH . 
G 5 HOH A 7 407 60 HOH HOH . 
G 5 HOH A 8 408 126 HOH HOH . 
G 5 HOH A 9 409 25 HOH HOH . 
G 5 HOH A 10 410 38 HOH HOH . 
G 5 HOH A 11 411 21 HOH HOH . 
G 5 HOH A 12 412 45 HOH HOH . 
G 5 HOH A 13 413 103 HOH HOH . 
G 5 HOH A 14 414 10 HOH HOH . 
G 5 HOH A 15 415 28 HOH HOH . 
G 5 HOH A 16 416 115 HOH HOH . 
G 5 HOH A 17 417 129 HOH HOH . 
G 5 HOH A 18 418 116 HOH HOH . 
G 5 HOH A 19 419 33 HOH HOH . 
G 5 HOH A 20 420 91 HOH HOH . 
G 5 HOH A 21 421 135 HOH HOH . 
G 5 HOH A 22 422 118 HOH HOH . 
G 5 HOH A 23 423 88 HOH HOH . 
G 5 HOH A 24 424 132 HOH HOH . 
G 5 HOH A 25 425 19 HOH HOH . 
G 5 HOH A 26 426 55 HOH HOH . 
G 5 HOH A 27 427 102 HOH HOH . 
G 5 HOH A 28 428 26 HOH HOH . 
G 5 HOH A 29 429 29 HOH HOH . 
G 5 HOH A 30 430 61 HOH HOH . 
G 5 HOH A 31 431 99 HOH HOH . 
G 5 HOH A 32 432 70 HOH HOH . 
G 5 HOH A 33 433 16 HOH HOH . 
G 5 HOH A 34 434 4 HOH HOH . 
G 5 HOH A 35 435 62 HOH HOH . 
G 5 HOH A 36 436 32 HOH HOH . 
G 5 HOH A 37 437 53 HOH HOH . 
G 5 HOH A 38 438 30 HOH HOH . 
G 5 HOH A 39 439 7 HOH HOH . 
G 5 HOH A 40 440 12 HOH HOH . 
G 5 HOH A 41 441 37 HOH HOH . 
G 5 HOH A 42 442 14 HOH HOH . 
G 5 HOH A 43 443 136 HOH HOH . 
G 5 HOH A 44 444 128 HOH HOH . 
G 5 HOH A 45 445 75 HOH HOH . 
G 5 HOH A 46 446 36 HOH HOH . 
G 5 HOH A 47 447 105 HOH HOH . 
G 5 HOH A 48 448 113 HOH HOH . 
G 5 HOH A 49 449 65 HOH HOH . 
G 5 HOH A 50 450 64 HOH HOH . 
G 5 HOH A 51 451 39 HOH HOH . 
G 5 HOH A 52 452 40 HOH HOH . 
G 5 HOH A 53 453 57 HOH HOH . 
G 5 HOH A 54 454 108 HOH HOH . 
G 5 HOH A 55 455 86 HOH HOH . 
G 5 HOH A 56 456 50 HOH HOH . 
G 5 HOH A 57 457 59 HOH HOH . 
G 5 HOH A 58 458 67 HOH HOH . 
G 5 HOH A 59 459 73 HOH HOH . 
G 5 HOH A 60 460 114 HOH HOH . 
G 5 HOH A 61 461 87 HOH HOH . 
G 5 HOH A 62 462 58 HOH HOH . 
G 5 HOH A 63 463 117 HOH HOH . 
G 5 HOH A 64 464 43 HOH HOH . 
G 5 HOH A 65 465 81 HOH HOH . 
G 5 HOH A 66 466 82 HOH HOH . 
H 5 HOH B 1 401 111 HOH HOH . 
H 5 HOH B 2 402 98 HOH HOH . 
H 5 HOH B 3 403 49 HOH HOH . 
H 5 HOH B 4 404 9 HOH HOH . 
H 5 HOH B 5 405 48 HOH HOH . 
H 5 HOH B 6 406 97 HOH HOH . 
H 5 HOH B 7 407 76 HOH HOH . 
H 5 HOH B 8 408 109 HOH HOH . 
H 5 HOH B 9 409 44 HOH HOH . 
H 5 HOH B 10 410 31 HOH HOH . 
H 5 HOH B 11 411 3 HOH HOH . 
H 5 HOH B 12 412 24 HOH HOH . 
H 5 HOH B 13 413 1 HOH HOH . 
H 5 HOH B 14 414 104 HOH HOH . 
H 5 HOH B 15 415 46 HOH HOH . 
H 5 HOH B 16 416 22 HOH HOH . 
H 5 HOH B 17 417 18 HOH HOH . 
H 5 HOH B 18 418 35 HOH HOH . 
H 5 HOH B 19 419 68 HOH HOH . 
H 5 HOH B 20 420 54 HOH HOH . 
H 5 HOH B 21 421 5 HOH HOH . 
H 5 HOH B 22 422 6 HOH HOH . 
H 5 HOH B 23 423 80 HOH HOH . 
H 5 HOH B 24 424 100 HOH HOH . 
H 5 HOH B 25 425 66 HOH HOH . 
H 5 HOH B 26 426 23 HOH HOH . 
H 5 HOH B 27 427 27 HOH HOH . 
H 5 HOH B 28 428 8 HOH HOH . 
H 5 HOH B 29 429 101 HOH HOH . 
H 5 HOH B 30 430 84 HOH HOH . 
H 5 HOH B 31 431 15 HOH HOH . 
H 5 HOH B 32 432 131 HOH HOH . 
H 5 HOH B 33 433 71 HOH HOH . 
H 5 HOH B 34 434 63 HOH HOH . 
H 5 HOH B 35 435 72 HOH HOH . 
H 5 HOH B 36 436 83 HOH HOH . 
H 5 HOH B 37 437 137 HOH HOH . 
H 5 HOH B 38 438 74 HOH HOH . 
H 5 HOH B 39 439 133 HOH HOH . 
H 5 HOH B 40 440 56 HOH HOH . 
H 5 HOH B 41 441 17 HOH HOH . 
H 5 HOH B 42 442 20 HOH HOH . 
H 5 HOH B 43 443 122 HOH HOH . 
H 5 HOH B 44 444 13 HOH HOH . 
H 5 HOH B 45 445 130 HOH HOH . 
H 5 HOH B 46 446 77 HOH HOH . 
H 5 HOH B 47 447 93 HOH HOH . 
H 5 HOH B 48 448 34 HOH HOH . 
H 5 HOH B 49 449 106 HOH HOH . 
H 5 HOH B 50 450 69 HOH HOH . 
H 5 HOH B 51 451 124 HOH HOH . 
H 5 HOH B 52 452 2 HOH HOH . 
H 5 HOH B 53 453 90 HOH HOH . 
H 5 HOH B 54 454 52 HOH HOH . 
H 5 HOH B 55 455 138 HOH HOH . 
H 5 HOH B 56 456 94 HOH HOH . 
H 5 HOH B 57 457 120 HOH HOH . 
H 5 HOH B 58 458 119 HOH HOH . 
H 5 HOH B 59 459 121 HOH HOH . 
H 5 HOH B 60 460 41 HOH HOH . 
H 5 HOH B 61 461 47 HOH HOH . 
H 5 HOH B 62 462 110 HOH HOH . 
H 5 HOH B 63 463 85 HOH HOH . 
H 5 HOH B 64 464 142 HOH HOH . 
H 5 HOH B 65 465 125 HOH HOH . 
H 5 HOH B 66 466 42 HOH HOH . 
H 5 HOH B 67 467 140 HOH HOH . 
H 5 HOH B 68 468 123 HOH HOH . 
H 5 HOH B 69 469 141 HOH HOH . 
H 5 HOH B 70 470 112 HOH HOH . 
H 5 HOH B 71 471 95 HOH HOH . 
H 5 HOH B 72 472 89 HOH HOH . 
H 5 HOH B 73 473 96 HOH HOH . 
H 5 HOH B 74 474 139 HOH HOH . 
H 5 HOH B 75 475 51 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               16.493 
_atom_site.Cartn_y               3.791 
_atom_site.Cartn_z               28.023 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.49 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           303 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#