data_5U9U # _model_server_result.job_id qYCz3QERd1XMKEZ2ExH4Ow _model_server_result.datetime_utc '2024-11-12 23:51:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5u9u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":102}' # _entry.id 5U9U # _exptl.entry_id 5U9U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5U9U _cell.length_a 32.327 _cell.length_b 67.517 _cell.length_c 69.034 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5U9U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLU 2 A GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C LYS 16 A LYS 15 1_555 A N DCY 17 A DCY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale3 A C DCY 17 A DCY 16 1_555 A N GLN 18 A GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale4 A C GLY 30 A GLY 29 1_555 A N NH2 31 A NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 B C ACE 1 B ACE 0 1_555 B N GLU 2 B GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 B C LYS 16 B LYS 15 1_555 B N DCY 17 B DCY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? covale ? covale7 B C DCY 17 B DCY 16 1_555 B N GLN 18 B GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 B C GLY 30 B GLY 29 1_555 B N NH2 31 B NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 C C ACE 1 C ACE 0 1_555 C N GLU 2 C GLU 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale10 C C LYS 16 C LYS 15 1_555 C N DCY 17 C DCY 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale11 C C DCY 17 C DCY 16 1_555 C N GLN 18 C GLN 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale12 C C GLY 30 C GLY 29 1_555 C N NH2 31 C NH2 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? metalc ? metalc1 A OE1 GLU 2 A GLU 1 1_555 G ZN ZN . B ZN 103 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc2 A OE1 GLU 4 A GLU 3 1_555 D ZN ZN . A ZN 101 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc3 A OE2 GLU 4 A GLU 3 1_555 D ZN ZN . A ZN 101 2_454 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc4 A OE1 GLU 25 A GLU 24 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc5 A OE1 GLU 28 A GLU 27 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? metalc ? metalc6 A NE2 HIS 29 A HIS 28 1_555 D ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc7 B OE1 GLU 4 B GLU 3 1_555 F ZN ZN . B ZN 102 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc8 B OE2 GLU 7 B GLU 6 1_555 G ZN ZN . B ZN 103 3_444 ? A ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc9 B OE2 GLU 25 B GLU 24 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc10 B OE1 GLU 28 B GLU 27 1_555 E ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc11 B NE2 HIS 29 B HIS 28 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc12 B ND1 HIS 29 B HIS 28 1_555 G ZN ZN . B ZN 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc13 E ZN ZN . B ZN 101 4_455 C OE1 GLU 28 C GLU 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc14 E ZN ZN . B ZN 101 4_455 C ND1 HIS 29 C HIS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc15 E ZN ZN . B ZN 101 1_555 M O HOH . C HOH 219 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc16 F ZN ZN . B ZN 102 4_455 C NE2 HIS 29 C HIS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc17 G ZN ZN . B ZN 103 1_555 L O HOH . B HOH 204 3_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5U9U _atom_sites.fract_transf_matrix[1][1] 0.030934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014486 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 101 101 ZN ZN . E 2 ZN B 1 101 101 ZN ZN . F 2 ZN B 1 102 102 ZN ZN . G 2 ZN B 1 103 103 ZN ZN . H 3 15P B 1 104 104 15P 15P . I 4 CL B 1 105 105 CL CL . J 3 15P C 1 101 101 15P 15P . K 5 HOH A 1 201 201 HOH HOH . K 5 HOH A 2 202 202 HOH HOH . K 5 HOH A 3 203 203 HOH HOH . K 5 HOH A 4 204 204 HOH HOH . K 5 HOH A 5 205 205 HOH HOH . K 5 HOH A 6 206 206 HOH HOH . K 5 HOH A 7 207 207 HOH HOH . K 5 HOH A 8 208 208 HOH HOH . K 5 HOH A 9 209 209 HOH HOH . K 5 HOH A 10 210 210 HOH HOH . K 5 HOH A 11 211 211 HOH HOH . K 5 HOH A 12 212 212 HOH HOH . K 5 HOH A 13 213 213 HOH HOH . K 5 HOH A 14 214 214 HOH HOH . K 5 HOH A 15 215 215 HOH HOH . K 5 HOH A 16 216 216 HOH HOH . K 5 HOH A 17 217 217 HOH HOH . K 5 HOH A 18 218 218 HOH HOH . K 5 HOH A 19 219 219 HOH HOH . K 5 HOH A 20 220 220 HOH HOH . K 5 HOH A 21 221 221 HOH HOH . K 5 HOH A 22 222 222 HOH HOH . K 5 HOH A 23 223 223 HOH HOH . K 5 HOH A 24 224 224 HOH HOH . K 5 HOH A 25 225 225 HOH HOH . K 5 HOH A 26 226 226 HOH HOH . K 5 HOH A 27 227 227 HOH HOH . K 5 HOH A 28 228 228 HOH HOH . K 5 HOH A 29 229 229 HOH HOH . K 5 HOH A 30 230 230 HOH HOH . K 5 HOH A 31 231 231 HOH HOH . K 5 HOH A 32 232 232 HOH HOH . K 5 HOH A 33 233 233 HOH HOH . K 5 HOH A 34 234 234 HOH HOH . K 5 HOH A 35 235 235 HOH HOH . K 5 HOH A 36 236 236 HOH HOH . K 5 HOH A 37 237 237 HOH HOH . K 5 HOH A 38 238 238 HOH HOH . K 5 HOH A 39 239 239 HOH HOH . K 5 HOH A 40 240 240 HOH HOH . K 5 HOH A 41 241 241 HOH HOH . K 5 HOH A 42 242 242 HOH HOH . K 5 HOH A 43 243 243 HOH HOH . K 5 HOH A 44 244 244 HOH HOH . K 5 HOH A 45 245 245 HOH HOH . K 5 HOH A 46 246 246 HOH HOH . K 5 HOH A 47 247 247 HOH HOH . K 5 HOH A 48 248 248 HOH HOH . K 5 HOH A 49 249 249 HOH HOH . K 5 HOH A 50 250 250 HOH HOH . K 5 HOH A 51 251 251 HOH HOH . K 5 HOH A 52 252 252 HOH HOH . K 5 HOH A 53 253 253 HOH HOH . L 5 HOH B 1 201 201 HOH HOH . L 5 HOH B 2 202 202 HOH HOH . L 5 HOH B 3 203 203 HOH HOH . L 5 HOH B 4 204 204 HOH HOH . L 5 HOH B 5 205 205 HOH HOH . L 5 HOH B 6 206 206 HOH HOH . L 5 HOH B 7 207 207 HOH HOH . L 5 HOH B 8 208 208 HOH HOH . L 5 HOH B 9 209 209 HOH HOH . L 5 HOH B 10 210 210 HOH HOH . L 5 HOH B 11 211 211 HOH HOH . L 5 HOH B 12 212 212 HOH HOH . L 5 HOH B 13 213 213 HOH HOH . L 5 HOH B 14 214 214 HOH HOH . L 5 HOH B 15 215 215 HOH HOH . L 5 HOH B 16 216 216 HOH HOH . L 5 HOH B 17 217 217 HOH HOH . L 5 HOH B 18 218 218 HOH HOH . L 5 HOH B 19 219 219 HOH HOH . L 5 HOH B 20 220 220 HOH HOH . L 5 HOH B 21 221 221 HOH HOH . L 5 HOH B 22 222 222 HOH HOH . L 5 HOH B 23 223 223 HOH HOH . L 5 HOH B 24 224 224 HOH HOH . L 5 HOH B 25 225 225 HOH HOH . L 5 HOH B 26 226 226 HOH HOH . L 5 HOH B 27 227 227 HOH HOH . L 5 HOH B 28 228 228 HOH HOH . L 5 HOH B 29 229 229 HOH HOH . L 5 HOH B 30 230 230 HOH HOH . L 5 HOH B 31 231 231 HOH HOH . L 5 HOH B 32 232 232 HOH HOH . L 5 HOH B 33 233 233 HOH HOH . L 5 HOH B 34 234 234 HOH HOH . L 5 HOH B 35 235 235 HOH HOH . L 5 HOH B 36 236 236 HOH HOH . M 5 HOH C 1 201 201 HOH HOH . M 5 HOH C 2 202 202 HOH HOH . M 5 HOH C 3 203 203 HOH HOH . M 5 HOH C 4 204 204 HOH HOH . M 5 HOH C 5 205 205 HOH HOH . M 5 HOH C 6 206 206 HOH HOH . M 5 HOH C 7 207 207 HOH HOH . M 5 HOH C 8 208 208 HOH HOH . M 5 HOH C 9 209 209 HOH HOH . M 5 HOH C 10 210 210 HOH HOH . M 5 HOH C 11 211 211 HOH HOH . M 5 HOH C 12 212 212 HOH HOH . M 5 HOH C 13 213 213 HOH HOH . M 5 HOH C 14 214 214 HOH HOH . M 5 HOH C 15 215 215 HOH HOH . M 5 HOH C 16 216 216 HOH HOH . M 5 HOH C 17 217 217 HOH HOH . M 5 HOH C 18 218 218 HOH HOH . M 5 HOH C 19 219 219 HOH HOH . M 5 HOH C 20 220 220 HOH HOH . M 5 HOH C 21 221 221 HOH HOH . M 5 HOH C 22 222 222 HOH HOH . M 5 HOH C 23 223 223 HOH HOH . M 5 HOH C 24 224 224 HOH HOH . M 5 HOH C 25 225 225 HOH HOH . M 5 HOH C 26 226 226 HOH HOH . M 5 HOH C 27 227 227 HOH HOH . M 5 HOH C 28 228 228 HOH HOH . M 5 HOH C 29 229 229 HOH HOH . M 5 HOH C 30 230 230 HOH HOH . M 5 HOH C 31 231 231 HOH HOH . M 5 HOH C 32 232 232 HOH HOH . M 5 HOH C 33 233 233 HOH HOH . M 5 HOH C 34 234 234 HOH HOH . M 5 HOH C 35 235 235 HOH HOH . M 5 HOH C 36 236 236 HOH HOH . M 5 HOH C 37 237 237 HOH HOH . M 5 HOH C 38 238 238 HOH HOH . M 5 HOH C 39 239 239 HOH HOH . M 5 HOH C 40 240 240 HOH HOH . M 5 HOH C 41 241 241 HOH HOH . M 5 HOH C 42 242 242 HOH HOH . M 5 HOH C 43 243 243 HOH HOH . M 5 HOH C 44 244 244 HOH HOH . M 5 HOH C 45 245 245 HOH HOH . M 5 HOH C 46 246 246 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.991 _atom_site.Cartn_y 22.439 _atom_site.Cartn_z -7.707 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 20.52 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #