data_5UB4
#
_model_server_result.job_id            fNKyQZkyPFfsCZa67NmyEA 
_model_server_result.datetime_utc      '2024-10-10 02:33:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ub4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    5UB4 
#
_exptl.entry_id    5UB4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UB4 
_cell.length_a            66.88 
_cell.length_b            67.094 
_cell.length_c            113.492 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UB4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     5UB4 
_atom_sites.fract_transf_matrix[1][1]    0.014952 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014904 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008811 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 401 4 CL CL . 
D 3 PO4 A 1 402 1 PO4 PO4 . 
E 2 CL B 1 401 3 CL CL . 
F 3 PO4 B 1 402 2 PO4 PO4 . 
G 4 HOH A 1 501 79 HOH HOH . 
G 4 HOH A 2 502 112 HOH HOH . 
G 4 HOH A 3 503 198 HOH HOH . 
G 4 HOH A 4 504 48 HOH HOH . 
G 4 HOH A 5 505 223 HOH HOH . 
G 4 HOH A 6 506 40 HOH HOH . 
G 4 HOH A 7 507 72 HOH HOH . 
G 4 HOH A 8 508 23 HOH HOH . 
G 4 HOH A 9 509 184 HOH HOH . 
G 4 HOH A 10 510 210 HOH HOH . 
G 4 HOH A 11 511 74 HOH HOH . 
G 4 HOH A 12 512 18 HOH HOH . 
G 4 HOH A 13 513 86 HOH HOH . 
G 4 HOH A 14 514 82 HOH HOH . 
G 4 HOH A 15 515 90 HOH HOH . 
G 4 HOH A 16 516 140 HOH HOH . 
G 4 HOH A 17 517 170 HOH HOH . 
G 4 HOH A 18 518 44 HOH HOH . 
G 4 HOH A 19 519 12 HOH HOH . 
G 4 HOH A 20 520 38 HOH HOH . 
G 4 HOH A 21 521 100 HOH HOH . 
G 4 HOH A 22 522 192 HOH HOH . 
G 4 HOH A 23 523 69 HOH HOH . 
G 4 HOH A 24 524 217 HOH HOH . 
G 4 HOH A 25 525 153 HOH HOH . 
G 4 HOH A 26 526 15 HOH HOH . 
G 4 HOH A 27 527 229 HOH HOH . 
G 4 HOH A 28 528 106 HOH HOH . 
G 4 HOH A 29 529 159 HOH HOH . 
G 4 HOH A 30 530 63 HOH HOH . 
G 4 HOH A 31 531 93 HOH HOH . 
G 4 HOH A 32 532 165 HOH HOH . 
G 4 HOH A 33 533 120 HOH HOH . 
G 4 HOH A 34 534 54 HOH HOH . 
G 4 HOH A 35 535 125 HOH HOH . 
G 4 HOH A 36 536 3 HOH HOH . 
G 4 HOH A 37 537 27 HOH HOH . 
G 4 HOH A 38 538 60 HOH HOH . 
G 4 HOH A 39 539 95 HOH HOH . 
G 4 HOH A 40 540 216 HOH HOH . 
G 4 HOH A 41 541 97 HOH HOH . 
G 4 HOH A 42 542 45 HOH HOH . 
G 4 HOH A 43 543 166 HOH HOH . 
G 4 HOH A 44 544 83 HOH HOH . 
G 4 HOH A 45 545 14 HOH HOH . 
G 4 HOH A 46 546 119 HOH HOH . 
G 4 HOH A 47 547 17 HOH HOH . 
G 4 HOH A 48 548 172 HOH HOH . 
G 4 HOH A 49 549 59 HOH HOH . 
G 4 HOH A 50 550 163 HOH HOH . 
G 4 HOH A 51 551 149 HOH HOH . 
G 4 HOH A 52 552 8 HOH HOH . 
G 4 HOH A 53 553 10 HOH HOH . 
G 4 HOH A 54 554 32 HOH HOH . 
G 4 HOH A 55 555 107 HOH HOH . 
G 4 HOH A 56 556 105 HOH HOH . 
G 4 HOH A 57 557 175 HOH HOH . 
G 4 HOH A 58 558 53 HOH HOH . 
G 4 HOH A 59 559 22 HOH HOH . 
G 4 HOH A 60 560 114 HOH HOH . 
G 4 HOH A 61 561 77 HOH HOH . 
G 4 HOH A 62 562 113 HOH HOH . 
G 4 HOH A 63 563 37 HOH HOH . 
G 4 HOH A 64 564 188 HOH HOH . 
G 4 HOH A 65 565 187 HOH HOH . 
G 4 HOH A 66 566 128 HOH HOH . 
G 4 HOH A 67 567 41 HOH HOH . 
G 4 HOH A 68 568 85 HOH HOH . 
G 4 HOH A 69 569 16 HOH HOH . 
G 4 HOH A 70 570 110 HOH HOH . 
G 4 HOH A 71 571 75 HOH HOH . 
G 4 HOH A 72 572 98 HOH HOH . 
G 4 HOH A 73 573 99 HOH HOH . 
G 4 HOH A 74 574 194 HOH HOH . 
G 4 HOH A 75 575 71 HOH HOH . 
G 4 HOH A 76 576 212 HOH HOH . 
G 4 HOH A 77 577 52 HOH HOH . 
G 4 HOH A 78 578 29 HOH HOH . 
G 4 HOH A 79 579 104 HOH HOH . 
G 4 HOH A 80 580 62 HOH HOH . 
G 4 HOH A 81 581 164 HOH HOH . 
G 4 HOH A 82 582 143 HOH HOH . 
G 4 HOH A 83 583 148 HOH HOH . 
G 4 HOH A 84 584 36 HOH HOH . 
G 4 HOH A 85 585 185 HOH HOH . 
G 4 HOH A 86 586 220 HOH HOH . 
G 4 HOH A 87 587 190 HOH HOH . 
G 4 HOH A 88 588 31 HOH HOH . 
G 4 HOH A 89 589 215 HOH HOH . 
G 4 HOH A 90 590 121 HOH HOH . 
G 4 HOH A 91 591 123 HOH HOH . 
G 4 HOH A 92 592 26 HOH HOH . 
G 4 HOH A 93 593 209 HOH HOH . 
G 4 HOH A 94 594 176 HOH HOH . 
G 4 HOH A 95 595 193 HOH HOH . 
G 4 HOH A 96 596 33 HOH HOH . 
G 4 HOH A 97 597 134 HOH HOH . 
G 4 HOH A 98 598 129 HOH HOH . 
G 4 HOH A 99 599 117 HOH HOH . 
G 4 HOH A 100 600 171 HOH HOH . 
G 4 HOH A 101 601 118 HOH HOH . 
G 4 HOH A 102 602 221 HOH HOH . 
G 4 HOH A 103 603 70 HOH HOH . 
G 4 HOH A 104 604 154 HOH HOH . 
G 4 HOH A 105 605 191 HOH HOH . 
G 4 HOH A 106 606 51 HOH HOH . 
G 4 HOH A 107 607 204 HOH HOH . 
H 4 HOH B 1 501 94 HOH HOH . 
H 4 HOH B 2 502 2 HOH HOH . 
H 4 HOH B 3 503 200 HOH HOH . 
H 4 HOH B 4 504 211 HOH HOH . 
H 4 HOH B 5 505 218 HOH HOH . 
H 4 HOH B 6 506 213 HOH HOH . 
H 4 HOH B 7 507 96 HOH HOH . 
H 4 HOH B 8 508 201 HOH HOH . 
H 4 HOH B 9 509 127 HOH HOH . 
H 4 HOH B 10 510 135 HOH HOH . 
H 4 HOH B 11 511 136 HOH HOH . 
H 4 HOH B 12 512 81 HOH HOH . 
H 4 HOH B 13 513 68 HOH HOH . 
H 4 HOH B 14 514 34 HOH HOH . 
H 4 HOH B 15 515 80 HOH HOH . 
H 4 HOH B 16 516 133 HOH HOH . 
H 4 HOH B 17 517 160 HOH HOH . 
H 4 HOH B 18 518 84 HOH HOH . 
H 4 HOH B 19 519 208 HOH HOH . 
H 4 HOH B 20 520 142 HOH HOH . 
H 4 HOH B 21 521 1 HOH HOH . 
H 4 HOH B 22 522 43 HOH HOH . 
H 4 HOH B 23 523 57 HOH HOH . 
H 4 HOH B 24 524 4 HOH HOH . 
H 4 HOH B 25 525 87 HOH HOH . 
H 4 HOH B 26 526 103 HOH HOH . 
H 4 HOH B 27 527 162 HOH HOH . 
H 4 HOH B 28 528 167 HOH HOH . 
H 4 HOH B 29 529 67 HOH HOH . 
H 4 HOH B 30 530 102 HOH HOH . 
H 4 HOH B 31 531 65 HOH HOH . 
H 4 HOH B 32 532 126 HOH HOH . 
H 4 HOH B 33 533 7 HOH HOH . 
H 4 HOH B 34 534 61 HOH HOH . 
H 4 HOH B 35 535 88 HOH HOH . 
H 4 HOH B 36 536 92 HOH HOH . 
H 4 HOH B 37 537 35 HOH HOH . 
H 4 HOH B 38 538 9 HOH HOH . 
H 4 HOH B 39 539 49 HOH HOH . 
H 4 HOH B 40 540 116 HOH HOH . 
H 4 HOH B 41 541 214 HOH HOH . 
H 4 HOH B 42 542 196 HOH HOH . 
H 4 HOH B 43 543 56 HOH HOH . 
H 4 HOH B 44 544 152 HOH HOH . 
H 4 HOH B 45 545 108 HOH HOH . 
H 4 HOH B 46 546 228 HOH HOH . 
H 4 HOH B 47 547 28 HOH HOH . 
H 4 HOH B 48 548 24 HOH HOH . 
H 4 HOH B 49 549 197 HOH HOH . 
H 4 HOH B 50 550 25 HOH HOH . 
H 4 HOH B 51 551 111 HOH HOH . 
H 4 HOH B 52 552 139 HOH HOH . 
H 4 HOH B 53 553 5 HOH HOH . 
H 4 HOH B 54 554 138 HOH HOH . 
H 4 HOH B 55 555 19 HOH HOH . 
H 4 HOH B 56 556 131 HOH HOH . 
H 4 HOH B 57 557 182 HOH HOH . 
H 4 HOH B 58 558 11 HOH HOH . 
H 4 HOH B 59 559 180 HOH HOH . 
H 4 HOH B 60 560 55 HOH HOH . 
H 4 HOH B 61 561 73 HOH HOH . 
H 4 HOH B 62 562 101 HOH HOH . 
H 4 HOH B 63 563 219 HOH HOH . 
H 4 HOH B 64 564 89 HOH HOH . 
H 4 HOH B 65 565 226 HOH HOH . 
H 4 HOH B 66 566 144 HOH HOH . 
H 4 HOH B 67 567 13 HOH HOH . 
H 4 HOH B 68 568 21 HOH HOH . 
H 4 HOH B 69 569 78 HOH HOH . 
H 4 HOH B 70 570 151 HOH HOH . 
H 4 HOH B 71 571 50 HOH HOH . 
H 4 HOH B 72 572 91 HOH HOH . 
H 4 HOH B 73 573 122 HOH HOH . 
H 4 HOH B 74 574 64 HOH HOH . 
H 4 HOH B 75 575 42 HOH HOH . 
H 4 HOH B 76 576 30 HOH HOH . 
H 4 HOH B 77 577 137 HOH HOH . 
H 4 HOH B 78 578 173 HOH HOH . 
H 4 HOH B 79 579 76 HOH HOH . 
H 4 HOH B 80 580 207 HOH HOH . 
H 4 HOH B 81 581 132 HOH HOH . 
H 4 HOH B 82 582 66 HOH HOH . 
H 4 HOH B 83 583 124 HOH HOH . 
H 4 HOH B 84 584 39 HOH HOH . 
H 4 HOH B 85 585 58 HOH HOH . 
H 4 HOH B 86 586 203 HOH HOH . 
H 4 HOH B 87 587 195 HOH HOH . 
H 4 HOH B 88 588 46 HOH HOH . 
H 4 HOH B 89 589 6 HOH HOH . 
H 4 HOH B 90 590 130 HOH HOH . 
H 4 HOH B 91 591 20 HOH HOH . 
H 4 HOH B 92 592 161 HOH HOH . 
H 4 HOH B 93 593 174 HOH HOH . 
H 4 HOH B 94 594 179 HOH HOH . 
H 4 HOH B 95 595 109 HOH HOH . 
H 4 HOH B 96 596 115 HOH HOH . 
H 4 HOH B 97 597 145 HOH HOH . 
H 4 HOH B 98 598 206 HOH HOH . 
H 4 HOH B 99 599 141 HOH HOH . 
H 4 HOH B 100 600 189 HOH HOH . 
H 4 HOH B 101 601 227 HOH HOH . 
H 4 HOH B 102 602 181 HOH HOH . 
H 4 HOH B 103 603 183 HOH HOH . 
H 4 HOH B 104 604 202 HOH HOH . 
H 4 HOH B 105 605 199 HOH HOH . 
H 4 HOH B 106 606 205 HOH HOH . 
H 4 HOH B 107 607 47 HOH HOH . 
H 4 HOH B 108 608 158 HOH HOH . 
H 4 HOH B 109 609 177 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 3 -17.516 2.645 40.856 1 27.25 ? P PO4 402 A 1 
HETATM 2 O O1 PO4 . . . D 3 -18.824 2.458 40.13 1 24.71 ? O1 PO4 402 A 1 
HETATM 3 O O2 PO4 . . . D 3 -16.618 3.687 40.216 1 26.57 ? O2 PO4 402 A 1 
HETATM 4 O O3 PO4 . . . D 3 -16.79 1.352 40.859 1 20.05 ? O3 PO4 402 A 1 
HETATM 5 O O4 PO4 . . . D 3 -17.882 3.166 42.307 1 25.05 ? O4 PO4 402 A 1 
#
_model_server_stats.io_time_ms              103 
_model_server_stats.parse_time_ms           132 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#