data_5UC1 # _model_server_result.job_id xV9OZa9KM1yMzyQEC9CHVg _model_server_result.datetime_utc '2024-11-25 15:50:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uc1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":809}' # _entry.id 5UC1 # _exptl.entry_id 5UC1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UC1 _cell.length_a 48.361 _cell.length_b 48.361 _cell.length_c 385.802 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UC1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N ? 6 Q N N ? 6 R N N ? 6 S N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 257 n n C1 C2 EDO sing 258 n n C1 H11 EDO sing 259 n n C1 H12 EDO sing 260 n n O1 HO1 EDO sing 261 n n C2 O2 EDO sing 262 n n C2 H21 EDO sing 263 n n C2 H22 EDO sing 264 n n O2 HO2 EDO sing 265 n n # _atom_sites.entry_id 5UC1 _atom_sites.fract_transf_matrix[1][1] 0.020678 _atom_sites.fract_transf_matrix[1][2] 0.011938 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002592 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 486 A 1 801 1 486 486 . D 3 CPS A 1 802 2 CPS CPS . E 3 CPS A 1 803 3 CPS CPS . F 4 CL A 1 804 2 CL CL . G 4 CL A 1 805 3 CL CL . H 5 MPD A 1 806 2 MPD MPD . I 6 EDO A 1 807 3 EDO EDO . J 6 EDO A 1 808 4 EDO EDO . K 2 486 B 1 801 2 486 486 . L 3 CPS B 1 802 1 CPS CPS . M 3 CPS B 1 803 4 CPS CPS . N 4 CL B 1 804 1 CL CL . O 4 CL B 1 805 4 CL CL . P 5 MPD B 1 806 1 MPD MPD . Q 6 EDO B 1 807 1 EDO EDO . R 6 EDO B 1 808 2 EDO EDO . S 6 EDO B 1 809 5 EDO EDO . T 7 HOH A 1 901 10 HOH HOH . T 7 HOH A 2 902 16 HOH HOH . T 7 HOH A 3 903 4 HOH HOH . T 7 HOH A 4 904 5 HOH HOH . T 7 HOH A 5 905 1 HOH HOH . T 7 HOH A 6 906 2 HOH HOH . T 7 HOH A 7 907 11 HOH HOH . T 7 HOH A 8 908 8 HOH HOH . T 7 HOH A 9 909 15 HOH HOH . T 7 HOH A 10 910 18 HOH HOH . U 7 HOH B 1 901 13 HOH HOH . U 7 HOH B 2 902 14 HOH HOH . U 7 HOH B 3 903 7 HOH HOH . U 7 HOH B 4 904 3 HOH HOH . U 7 HOH B 5 905 6 HOH HOH . U 7 HOH B 6 906 9 HOH HOH . U 7 HOH B 7 907 19 HOH HOH . U 7 HOH B 8 908 17 HOH HOH . U 7 HOH B 9 909 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . S 6 -24.927 24.437 50.196 1 64.84 ? C1 EDO 809 B 1 HETATM 2 O O1 EDO . . . S 6 -24.062 24.845 51.275 1 53.29 ? O1 EDO 809 B 1 HETATM 3 C C2 EDO . . . S 6 -24.156 23.876 48.988 1 57.88 ? C2 EDO 809 B 1 HETATM 4 O O2 EDO . . . S 6 -25.036 23.632 47.869 1 63.11 ? O2 EDO 809 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #