data_5UD7
#
_model_server_result.job_id            fk0JFVPecf0H_rubGWj9AA 
_model_server_result.datetime_utc      '2024-12-03 12:52:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ud7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":201}' 
#
_entry.id    5UD7 
#
_exptl.entry_id    5UD7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UD7 
_cell.length_a            160.664 
_cell.length_b            160.664 
_cell.length_c            86.574 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UD7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 J N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 A CYS 36 1_555 A SG CYS 92 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf2 B SG CYS 18 B CYS 36 1_555 B SG CYS 92 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf3 C SG CYS 18 C CYS 36 1_555 C SG CYS 92 C CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf4 D SG CYS 18 D CYS 36 1_555 D SG CYS 92 D CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
disulf ? disulf5 E SG CYS 18 E CYS 36 1_555 E SG CYS 92 E CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf6 F SG CYS 18 F CYS 36 1_555 F SG CYS 92 F CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
covale ? covale1 A ND2 ASN 61 A ASN 79 1_555 G C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale2 B ND2 ASN 61 B ASN 79 1_555 I C1 NAG . B NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale3 C ND2 ASN 61 C ASN 79 1_555 K C1 NAG . C NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? 
covale ? covale4 D ND2 ASN 61 D ASN 79 1_555 M C1 NAG . D NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale5 E ND2 ASN 61 E ASN 79 1_555 Q C1 NAG . E NAG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? 
covale ? covale6 F ND2 ASN 61 F ASN 79 1_555 R C1 NAG . F NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5UD7 
_atom_sites.fract_transf_matrix[1][1]    0.006224 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006224 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011551 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 NAG A 1 201 1 NAG NAG . 
H 3 IOD B 1 201 11 IOD IOD . 
I 2 NAG B 1 202 2 NAG NAG . 
J 3 IOD C 1 201 10 IOD IOD . 
K 2 NAG C 1 202 5 NAG NAG . 
L 4 SO4 C 1 203 2 SO4 SO4 . 
M 2 NAG D 1 201 4 NAG NAG . 
N 3 IOD E 1 201 1 IOD IOD . 
O 3 IOD E 1 202 9 IOD IOD . 
P 3 IOD E 1 203 13 IOD IOD . 
Q 2 NAG E 1 204 6 NAG NAG . 
R 2 NAG F 1 201 7 NAG NAG . 
S 5 HOH A 1 301 113 HOH HOH . 
S 5 HOH A 2 302 122 HOH HOH . 
S 5 HOH A 3 303 116 HOH HOH . 
S 5 HOH A 4 304 30 HOH HOH . 
S 5 HOH A 5 305 52 HOH HOH . 
S 5 HOH A 6 306 14 HOH HOH . 
S 5 HOH A 7 307 53 HOH HOH . 
S 5 HOH A 8 308 56 HOH HOH . 
S 5 HOH A 9 309 118 HOH HOH . 
S 5 HOH A 10 310 57 HOH HOH . 
S 5 HOH A 11 311 106 HOH HOH . 
S 5 HOH A 12 312 54 HOH HOH . 
S 5 HOH A 13 313 22 HOH HOH . 
S 5 HOH A 14 314 115 HOH HOH . 
S 5 HOH A 15 315 55 HOH HOH . 
S 5 HOH A 16 316 51 HOH HOH . 
S 5 HOH A 17 317 119 HOH HOH . 
S 5 HOH A 18 318 34 HOH HOH . 
S 5 HOH A 19 319 31 HOH HOH . 
S 5 HOH A 20 320 29 HOH HOH . 
S 5 HOH A 21 321 120 HOH HOH . 
S 5 HOH A 22 322 58 HOH HOH . 
S 5 HOH A 23 323 50 HOH HOH . 
S 5 HOH A 24 324 20 HOH HOH . 
S 5 HOH A 25 325 123 HOH HOH . 
S 5 HOH A 26 326 117 HOH HOH . 
S 5 HOH A 27 327 127 HOH HOH . 
T 5 HOH B 1 301 114 HOH HOH . 
T 5 HOH B 2 302 19 HOH HOH . 
T 5 HOH B 3 303 107 HOH HOH . 
T 5 HOH B 4 304 125 HOH HOH . 
T 5 HOH B 5 305 44 HOH HOH . 
T 5 HOH B 6 306 4 HOH HOH . 
T 5 HOH B 7 307 129 HOH HOH . 
T 5 HOH B 8 308 109 HOH HOH . 
T 5 HOH B 9 309 61 HOH HOH . 
T 5 HOH B 10 310 130 HOH HOH . 
T 5 HOH B 11 311 124 HOH HOH . 
T 5 HOH B 12 312 62 HOH HOH . 
T 5 HOH B 13 313 126 HOH HOH . 
T 5 HOH B 14 314 42 HOH HOH . 
T 5 HOH B 15 315 128 HOH HOH . 
T 5 HOH B 16 316 69 HOH HOH . 
T 5 HOH B 17 317 1 HOH HOH . 
T 5 HOH B 18 318 131 HOH HOH . 
U 5 HOH C 1 301 105 HOH HOH . 
U 5 HOH C 2 302 103 HOH HOH . 
U 5 HOH C 3 303 45 HOH HOH . 
U 5 HOH C 4 304 75 HOH HOH . 
U 5 HOH C 5 305 71 HOH HOH . 
U 5 HOH C 6 306 15 HOH HOH . 
U 5 HOH C 7 307 68 HOH HOH . 
U 5 HOH C 8 308 46 HOH HOH . 
U 5 HOH C 9 309 48 HOH HOH . 
U 5 HOH C 10 310 74 HOH HOH . 
U 5 HOH C 11 311 70 HOH HOH . 
U 5 HOH C 12 312 32 HOH HOH . 
U 5 HOH C 13 313 137 HOH HOH . 
U 5 HOH C 14 314 41 HOH HOH . 
U 5 HOH C 15 315 21 HOH HOH . 
U 5 HOH C 16 316 37 HOH HOH . 
U 5 HOH C 17 317 134 HOH HOH . 
U 5 HOH C 18 318 67 HOH HOH . 
U 5 HOH C 19 319 73 HOH HOH . 
U 5 HOH C 20 320 108 HOH HOH . 
U 5 HOH C 21 321 38 HOH HOH . 
U 5 HOH C 22 322 8 HOH HOH . 
V 5 HOH D 1 301 81 HOH HOH . 
V 5 HOH D 2 302 9 HOH HOH . 
V 5 HOH D 3 303 138 HOH HOH . 
V 5 HOH D 4 304 23 HOH HOH . 
V 5 HOH D 5 305 76 HOH HOH . 
V 5 HOH D 6 306 12 HOH HOH . 
V 5 HOH D 7 307 139 HOH HOH . 
V 5 HOH D 8 308 85 HOH HOH . 
V 5 HOH D 9 309 24 HOH HOH . 
V 5 HOH D 10 310 27 HOH HOH . 
V 5 HOH D 11 311 78 HOH HOH . 
V 5 HOH D 12 312 77 HOH HOH . 
V 5 HOH D 13 313 47 HOH HOH . 
V 5 HOH D 14 314 86 HOH HOH . 
V 5 HOH D 15 315 82 HOH HOH . 
V 5 HOH D 16 316 79 HOH HOH . 
V 5 HOH D 17 317 17 HOH HOH . 
V 5 HOH D 18 318 80 HOH HOH . 
V 5 HOH D 19 319 141 HOH HOH . 
W 5 HOH E 1 301 84 HOH HOH . 
W 5 HOH E 2 302 133 HOH HOH . 
W 5 HOH E 3 303 88 HOH HOH . 
W 5 HOH E 4 304 18 HOH HOH . 
W 5 HOH E 5 305 89 HOH HOH . 
W 5 HOH E 6 306 145 HOH HOH . 
W 5 HOH E 7 307 87 HOH HOH . 
W 5 HOH E 8 308 26 HOH HOH . 
W 5 HOH E 9 309 64 HOH HOH . 
W 5 HOH E 10 310 140 HOH HOH . 
W 5 HOH E 11 311 5 HOH HOH . 
W 5 HOH E 12 312 121 HOH HOH . 
W 5 HOH E 13 313 16 HOH HOH . 
W 5 HOH E 14 314 63 HOH HOH . 
W 5 HOH E 15 315 66 HOH HOH . 
W 5 HOH E 16 316 112 HOH HOH . 
W 5 HOH E 17 317 7 HOH HOH . 
W 5 HOH E 18 318 10 HOH HOH . 
W 5 HOH E 19 319 83 HOH HOH . 
W 5 HOH E 20 320 144 HOH HOH . 
W 5 HOH E 21 321 143 HOH HOH . 
W 5 HOH E 22 322 142 HOH HOH . 
W 5 HOH E 23 323 6 HOH HOH . 
W 5 HOH E 24 324 90 HOH HOH . 
W 5 HOH E 25 325 65 HOH HOH . 
X 5 HOH F 1 301 135 HOH HOH . 
X 5 HOH F 2 302 43 HOH HOH . 
X 5 HOH F 3 303 92 HOH HOH . 
X 5 HOH F 4 304 100 HOH HOH . 
X 5 HOH F 5 305 60 HOH HOH . 
X 5 HOH F 6 306 35 HOH HOH . 
X 5 HOH F 7 307 2 HOH HOH . 
X 5 HOH F 8 308 147 HOH HOH . 
X 5 HOH F 9 309 36 HOH HOH . 
X 5 HOH F 10 310 96 HOH HOH . 
X 5 HOH F 11 311 102 HOH HOH . 
X 5 HOH F 12 312 97 HOH HOH . 
X 5 HOH F 13 313 146 HOH HOH . 
X 5 HOH F 14 314 104 HOH HOH . 
X 5 HOH F 15 315 11 HOH HOH . 
X 5 HOH F 16 316 28 HOH HOH . 
X 5 HOH F 17 317 40 HOH HOH . 
X 5 HOH F 18 318 95 HOH HOH . 
X 5 HOH F 19 319 148 HOH HOH . 
X 5 HOH F 20 320 98 HOH HOH . 
X 5 HOH F 21 321 59 HOH HOH . 
X 5 HOH F 22 322 93 HOH HOH . 
X 5 HOH F 23 323 99 HOH HOH . 
X 5 HOH F 24 324 13 HOH HOH . 
X 5 HOH F 25 325 151 HOH HOH . 
X 5 HOH F 26 326 3 HOH HOH . 
X 5 HOH F 27 327 101 HOH HOH . 
X 5 HOH F 28 328 111 HOH HOH . 
X 5 HOH F 29 329 25 HOH HOH . 
X 5 HOH F 30 330 152 HOH HOH . 
X 5 HOH F 31 331 91 HOH HOH . 
X 5 HOH F 32 332 94 HOH HOH . 
X 5 HOH F 33 333 150 HOH HOH . 
X 5 HOH F 34 334 39 HOH HOH . 
X 5 HOH F 35 335 33 HOH HOH . 
X 5 HOH F 36 336 49 HOH HOH . 
X 5 HOH F 37 337 110 HOH HOH . 
X 5 HOH F 38 338 136 HOH HOH . 
X 5 HOH F 39 339 149 HOH HOH . 
X 5 HOH F 40 340 153 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               15.175 
_atom_site.Cartn_y               17.277 
_atom_site.Cartn_z               8.44 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        39.68 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    50 
_model_server_stats.query_time_ms           417 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           1 
#