data_5UDC # _model_server_result.job_id -aZw7_3i88zqAwC4WgCTig _model_server_result.datetime_utc '2024-11-24 01:24:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5udc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":612}' # _entry.id 5UDC # _exptl.entry_id 5UDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.56 _cell.angle_gamma 90 _cell.entry_id 5UDC _cell.length_a 103.78 _cell.length_b 126.31 _cell.length_c 162.31 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 4 4 3 MAN BMA C1 O1 . O3 HO3 . sing 4 ? 4 5 4 MAN MAN C1 O1 . O2 HO2 . sing 5 ? 4 6 5 MAN MAN C1 O1 . O2 HO2 . sing 6 ? 4 7 3 MAN BMA C1 O1 . O6 HO6 . sing 7 ? 4 8 7 MAN MAN C1 O1 . O3 HO3 . sing 8 ? 4 9 8 MAN MAN C1 O1 . O2 HO2 . sing 9 ? 4 10 7 MAN MAN C1 O1 . O6 HO6 . sing 10 ? 4 11 10 MAN MAN C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n J NAG 1 I 1 NAG F 570 NAG 4 n J NAG 2 I 2 NAG F 571 NAG 4 n J BMA 3 I 3 BMA F 572 BMA 4 n J MAN 4 I 4 MAN F 573 MAN 4 n J MAN 5 I 5 MAN F 574 MAN 4 n J MAN 6 I 6 MAN F 575 MAN 4 n J MAN 7 I 7 MAN F 576 MAN 4 n J MAN 8 I 8 MAN F 577 MAN 4 n J MAN 9 I 9 MAN F 578 MAN 4 n J MAN 10 I 10 MAN F 579 MAN 4 n J MAN 11 I 11 MAN F 580 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 153 H CYS 140 1_555 A SG CYS 209 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 C SG CYS 37 F CYS 37 1_555 C SG CYS 439 F CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf6 C SG CYS 69 F CYS 69 1_555 C SG CYS 212 F CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 C SG CYS 155 F CYS 155 1_555 C SG CYS 290 F CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? disulf ? disulf8 C SG CYS 313 F CYS 313 1_555 C SG CYS 343 F CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf9 C SG CYS 322 F CYS 322 1_555 C SG CYS 333 F CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf10 C SG CYS 358 F CYS 358 1_555 C SG CYS 367 F CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf11 C SG CYS 382 F CYS 382 1_555 C SG CYS 393 F CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf12 C SG CYS 416 F CYS 416 1_555 C SG CYS 422 F CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf13 D SG CYS 22 B CYS 22 1_555 D SG CYS 96 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf14 D SG CYS 153 B CYS 140 1_555 D SG CYS 209 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf15 E SG CYS 23 C CYS 23 1_555 E SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf16 E SG CYS 134 C CYS 134 1_555 E SG CYS 194 C CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf17 F SG CYS 37 A CYS 37 1_555 F SG CYS 439 A CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf18 F SG CYS 69 A CYS 69 1_555 F SG CYS 212 A CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf19 F SG CYS 155 A CYS 155 1_555 F SG CYS 290 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf20 F SG CYS 313 A CYS 313 1_555 F SG CYS 343 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf21 F SG CYS 322 A CYS 322 1_555 F SG CYS 333 A CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf22 F SG CYS 358 A CYS 358 1_555 F SG CYS 367 A CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf23 F SG CYS 382 A CYS 382 1_555 F SG CYS 393 A CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf24 F SG CYS 416 A CYS 416 1_555 F SG CYS 422 A CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf25 G SG CYS 22 E CYS 22 1_555 G SG CYS 96 E CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf26 G SG CYS 153 E CYS 140 1_555 G SG CYS 209 E CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf27 H SG CYS 23 G CYS 23 1_555 H SG CYS 88 G CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf28 H SG CYS 134 G CYS 134 1_555 H SG CYS 194 G CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf29 I SG CYS 37 D CYS 37 1_555 I SG CYS 439 D CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf30 I SG CYS 69 D CYS 69 1_555 I SG CYS 212 D CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? disulf ? disulf31 I SG CYS 155 D CYS 155 1_555 I SG CYS 290 D CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf32 I SG CYS 313 D CYS 313 1_555 I SG CYS 343 D CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf33 I SG CYS 322 D CYS 322 1_555 I SG CYS 333 D CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf34 I SG CYS 358 D CYS 358 1_555 I SG CYS 367 D CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf35 I SG CYS 382 D CYS 382 1_555 I SG CYS 393 D CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf36 I SG CYS 416 D CYS 416 1_555 I SG CYS 422 D CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? covale ? covale1 C ND2 ASN 70 F ASN 70 1_555 J C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 J O4 NAG . I NAG 1 1_555 J C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 J O4 NAG . I NAG 2 1_555 J C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale4 J O3 BMA . I BMA 3 1_555 J C1 MAN . I MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale5 J O6 BMA . I BMA 3 1_555 J C1 MAN . I MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale6 J O2 MAN . I MAN 4 1_555 J C1 MAN . I MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale7 J O2 MAN . I MAN 5 1_555 J C1 MAN . I MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale8 J O3 MAN . I MAN 7 1_555 J C1 MAN . I MAN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale9 J O6 MAN . I MAN 7 1_555 J C1 MAN . I MAN 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale10 J O2 MAN . I MAN 8 1_555 J C1 MAN . I MAN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale11 J O2 MAN . I MAN 10 1_555 J C1 MAN . I MAN 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5UDC _atom_sites.fract_transf_matrix[1][1] 0.009636 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002147 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 5 CL F 1 612 1 CL CL . L 5 CL A 1 601 2 CL CL . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 5 _atom_site.Cartn_x -37.18 _atom_site.Cartn_y 22.159 _atom_site.Cartn_z -65.037 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 95.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 612 _atom_site.auth_asym_id F _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 216 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #