data_5UEC # _model_server_result.job_id Ox7Gs_N11F0giAKMO4oWVA _model_server_result.datetime_utc '2024-11-23 12:48:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 5UEC # _exptl.entry_id 5UEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 215.13 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S,5R)-2-(bromomethyl)-6,6-dimethylbicyclo[3.1.1]hept-2-ene _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5UEC _cell.length_a 77.247 _cell.length_b 77.247 _cell.length_c 202.792 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 417 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 436 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.159 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H15 Br' _chem_comp.formula_weight 215.13 _chem_comp.id 85D _chem_comp.mon_nstd_flag . _chem_comp.name (1S,5R)-2-(bromomethyl)-6,6-dimethylbicyclo[3.1.1]hept-2-ene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C10 85D sing 1 n n C10 C2 85D sing 2 n n C7 C1 85D sing 3 n n C7 C5 85D sing 4 n n C2 C1 85D sing 5 n n C2 C3 85D doub 6 n n C1 C6 85D sing 7 n n C3 C4 85D sing 8 n n C4 C5 85D sing 9 n n C5 C6 85D sing 10 n n C6 C9 85D sing 11 n n C6 C8 85D sing 12 n n C4 H1 85D sing 13 n n C4 H2 85D sing 14 n n C5 H3 85D sing 15 n n C7 H4 85D sing 16 n n C7 H5 85D sing 17 n n C8 H6 85D sing 18 n n C8 H7 85D sing 19 n n C8 H8 85D sing 20 n n C9 H9 85D sing 21 n n C9 H10 85D sing 22 n n C9 H11 85D sing 23 n n C10 H12 85D sing 24 n n C10 H13 85D sing 25 n n C3 H14 85D sing 26 n n C1 H15 85D sing 27 n n # _atom_sites.entry_id 5UEC _atom_sites.fract_transf_matrix[1][1] 0.012945 _atom_sites.fract_transf_matrix[1][2] 0.007474 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004931 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 CM5 A 1 502 504 CM5 CM5 . D 3 CM5 A 1 503 503 CM5 CM5 . E 3 CM5 A 1 504 505 CM5 CM5 . F 4 85D A 1 505 1 85D DRG . G 5 HOH A 1 601 24 HOH HOH . G 5 HOH A 2 602 75 HOH HOH . G 5 HOH A 3 603 88 HOH HOH . G 5 HOH A 4 604 123 HOH HOH . G 5 HOH A 5 605 11 HOH HOH . G 5 HOH A 6 606 159 HOH HOH . G 5 HOH A 7 607 306 HOH HOH . G 5 HOH A 8 608 152 HOH HOH . G 5 HOH A 9 609 80 HOH HOH . G 5 HOH A 10 610 98 HOH HOH . G 5 HOH A 11 611 293 HOH HOH . G 5 HOH A 12 612 33 HOH HOH . G 5 HOH A 13 613 93 HOH HOH . G 5 HOH A 14 614 21 HOH HOH . G 5 HOH A 15 615 65 HOH HOH . G 5 HOH A 16 616 212 HOH HOH . G 5 HOH A 17 617 89 HOH HOH . G 5 HOH A 18 618 301 HOH HOH . G 5 HOH A 19 619 154 HOH HOH . G 5 HOH A 20 620 8 HOH HOH . G 5 HOH A 21 621 164 HOH HOH . G 5 HOH A 22 622 2 HOH HOH . G 5 HOH A 23 623 19 HOH HOH . G 5 HOH A 24 624 15 HOH HOH . G 5 HOH A 25 625 13 HOH HOH . G 5 HOH A 26 626 121 HOH HOH . G 5 HOH A 27 627 178 HOH HOH . G 5 HOH A 28 628 64 HOH HOH . G 5 HOH A 29 629 69 HOH HOH . G 5 HOH A 30 630 59 HOH HOH . G 5 HOH A 31 631 221 HOH HOH . G 5 HOH A 32 632 77 HOH HOH . G 5 HOH A 33 633 40 HOH HOH . G 5 HOH A 34 634 334 HOH HOH . G 5 HOH A 35 635 232 HOH HOH . G 5 HOH A 36 636 62 HOH HOH . G 5 HOH A 37 637 92 HOH HOH . G 5 HOH A 38 638 82 HOH HOH . G 5 HOH A 39 639 58 HOH HOH . G 5 HOH A 40 640 83 HOH HOH . G 5 HOH A 41 641 141 HOH HOH . G 5 HOH A 42 642 117 HOH HOH . G 5 HOH A 43 643 155 HOH HOH . G 5 HOH A 44 644 3 HOH HOH . G 5 HOH A 45 645 90 HOH HOH . G 5 HOH A 46 646 176 HOH HOH . G 5 HOH A 47 647 23 HOH HOH . G 5 HOH A 48 648 314 HOH HOH . G 5 HOH A 49 649 14 HOH HOH . G 5 HOH A 50 650 196 HOH HOH . G 5 HOH A 51 651 39 HOH HOH . G 5 HOH A 52 652 48 HOH HOH . G 5 HOH A 53 653 158 HOH HOH . G 5 HOH A 54 654 109 HOH HOH . G 5 HOH A 55 655 160 HOH HOH . G 5 HOH A 56 656 61 HOH HOH . G 5 HOH A 57 657 22 HOH HOH . G 5 HOH A 58 658 127 HOH HOH . G 5 HOH A 59 659 287 HOH HOH . G 5 HOH A 60 660 67 HOH HOH . G 5 HOH A 61 661 153 HOH HOH . G 5 HOH A 62 662 108 HOH HOH . G 5 HOH A 63 663 18 HOH HOH . G 5 HOH A 64 664 128 HOH HOH . G 5 HOH A 65 665 47 HOH HOH . G 5 HOH A 66 666 79 HOH HOH . G 5 HOH A 67 667 125 HOH HOH . G 5 HOH A 68 668 29 HOH HOH . G 5 HOH A 69 669 12 HOH HOH . G 5 HOH A 70 670 133 HOH HOH . G 5 HOH A 71 671 70 HOH HOH . G 5 HOH A 72 672 30 HOH HOH . G 5 HOH A 73 673 104 HOH HOH . G 5 HOH A 74 674 85 HOH HOH . G 5 HOH A 75 675 26 HOH HOH . G 5 HOH A 76 676 31 HOH HOH . G 5 HOH A 77 677 119 HOH HOH . G 5 HOH A 78 678 68 HOH HOH . G 5 HOH A 79 679 84 HOH HOH . G 5 HOH A 80 680 7 HOH HOH . G 5 HOH A 81 681 107 HOH HOH . G 5 HOH A 82 682 282 HOH HOH . G 5 HOH A 83 683 50 HOH HOH . G 5 HOH A 84 684 156 HOH HOH . G 5 HOH A 85 685 38 HOH HOH . G 5 HOH A 86 686 151 HOH HOH . G 5 HOH A 87 687 170 HOH HOH . G 5 HOH A 88 688 5 HOH HOH . G 5 HOH A 89 689 289 HOH HOH . G 5 HOH A 90 690 86 HOH HOH . G 5 HOH A 91 691 17 HOH HOH . G 5 HOH A 92 692 42 HOH HOH . G 5 HOH A 93 693 37 HOH HOH . G 5 HOH A 94 694 46 HOH HOH . G 5 HOH A 95 695 211 HOH HOH . G 5 HOH A 96 696 49 HOH HOH . G 5 HOH A 97 697 91 HOH HOH . G 5 HOH A 98 698 355 HOH HOH . G 5 HOH A 99 699 99 HOH HOH . G 5 HOH A 100 700 105 HOH HOH . G 5 HOH A 101 701 110 HOH HOH . G 5 HOH A 102 702 113 HOH HOH . G 5 HOH A 103 703 106 HOH HOH . G 5 HOH A 104 704 71 HOH HOH . G 5 HOH A 105 705 55 HOH HOH . G 5 HOH A 106 706 45 HOH HOH . G 5 HOH A 107 707 6 HOH HOH . G 5 HOH A 108 708 27 HOH HOH . G 5 HOH A 109 709 240 HOH HOH . G 5 HOH A 110 710 95 HOH HOH . G 5 HOH A 111 711 35 HOH HOH . G 5 HOH A 112 712 25 HOH HOH . G 5 HOH A 113 713 81 HOH HOH . G 5 HOH A 114 714 73 HOH HOH . G 5 HOH A 115 715 165 HOH HOH . G 5 HOH A 116 716 296 HOH HOH . G 5 HOH A 117 717 112 HOH HOH . G 5 HOH A 118 718 251 HOH HOH . G 5 HOH A 119 719 41 HOH HOH . G 5 HOH A 120 720 44 HOH HOH . G 5 HOH A 121 721 166 HOH HOH . G 5 HOH A 122 722 118 HOH HOH . G 5 HOH A 123 723 43 HOH HOH . G 5 HOH A 124 724 52 HOH HOH . G 5 HOH A 125 725 216 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 85D . A . F 4 29.113 -24.12 10.79 0.5 50.15 ? C4 85D 505 A 1 HETATM 2 C C4 85D . C . F 4 32.273 -23.638 10.556 0.5 51.91 ? C4 85D 505 A 1 HETATM 3 C C5 85D . A . F 4 28.963 -22.603 10.811 0.5 56.44 ? C5 85D 505 A 1 HETATM 4 C C5 85D . C . F 4 31.394 -24.127 9.411 0.5 46.41 ? C5 85D 505 A 1 HETATM 5 C C6 85D . A . F 4 30.284 -21.986 11.226 0.5 47.25 ? C6 85D 505 A 1 HETATM 6 C C6 85D . C . F 4 29.953 -24.163 9.881 0.5 87.35 ? C6 85D 505 A 1 HETATM 7 C C7 85D . A . F 4 29.269 -22.06 9.422 0.5 91.59 ? C7 85D 505 A 1 HETATM 8 C C7 85D . C . F 4 30.976 -22.932 8.566 0.5 40.98 ? C7 85D 505 A 1 HETATM 9 C C8 85D . A . F 4 31.07 -22.847 12.217 0.5 75.15 ? C8 85D 505 A 1 HETATM 10 C C8 85D . C . F 4 29.808 -24.507 11.364 0.5 58.06 ? C8 85D 505 A 1 HETATM 11 C C9 85D . A . F 4 30.147 -20.513 11.631 0.5 45.48 ? C9 85D 505 A 1 HETATM 12 C C9 85D . C . F 4 29.047 -24.976 8.947 0.5 76.5 ? C9 85D 505 A 1 HETATM 13 C C10 85D . A . F 4 32.308 -23.798 8.978 0.5 44.64 ? C10 85D 505 A 1 HETATM 14 C C10 85D . C . F 4 29.886 -20.915 11.25 0.5 37.68 ? C10 85D 505 A 1 HETATM 15 C C3 85D . A . F 4 30.297 -24.472 10.139 0.5 81.42 ? C3 85D 505 A 1 HETATM 16 C C3 85D . C . F 4 31.693 -22.518 11.155 0.5 73.11 ? C3 85D 505 A 1 HETATM 17 BR BR1 85D . A . F 4 32.099 -23.498 7.069 0.5 96.35 ? BR1 85D 505 A 1 HETATM 18 BR BR1 85D . C . F 4 28.649 -21.489 12.635 0.5 100.33 ? BR1 85D 505 A 1 HETATM 19 C C2 85D . A . F 4 31.124 -23.476 9.631 0.5 79.85 ? C2 85D 505 A 1 HETATM 20 C C2 85D . C . F 4 30.485 -22.028 10.672 0.5 44.07 ? C2 85D 505 A 1 HETATM 21 C C1 85D . A . F 4 30.74 -22.157 9.792 0.5 48.92 ? C1 85D 505 A 1 HETATM 22 C C1 85D . C . F 4 29.893 -22.675 9.602 0.5 84.83 ? C1 85D 505 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 22 #