data_5UFP # _model_server_result.job_id hAZGXqVNGud9HPhf4Rg7FQ _model_server_result.datetime_utc '2025-02-05 04:07:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ufp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5UFP # _exptl.entry_id 5UFP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 419.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-({(1S)-7-[(difluoromethyl)sulfonyl]-2,2-difluoro-1-hydroxy-2,3-dihydro-1H-inden-4-yl}oxy)-5-fluorobenzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.48 _cell.angle_gamma 90 _cell.entry_id 5UFP _cell.length_a 73.379 _cell.length_b 84.057 _cell.length_c 41.472 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UFP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H10 F5 N O4 S' _chem_comp.formula_weight 419.323 _chem_comp.id 86D _chem_comp.mon_nstd_flag . _chem_comp.name 3-({(1S)-7-[(difluoromethyl)sulfonyl]-2,2-difluoro-1-hydroxy-2,3-dihydro-1H-inden-4-yl}oxy)-5-fluorobenzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C17 86D trip 1 n n C17 C6 86D sing 2 n n C6 C7 86D doub 3 n y C6 C5 86D sing 4 n y C7 C8 86D sing 5 n y C8 C9 86D doub 6 n y C8 O1 86D sing 7 n n C9 C10 86D sing 8 n y C10 F1 86D sing 9 n n C10 C5 86D doub 10 n y O1 C1 86D sing 11 n n C1 C14 86D doub 12 n y C1 C2 86D sing 13 n y C14 C15 86D sing 14 n n C14 C13 86D sing 15 n y C15 C11 86D sing 16 n n C11 F5 86D sing 17 n n C11 F2 86D sing 18 n n C11 C12 86D sing 19 n n C13 C12 86D sing 20 n n C13 C4 86D doub 21 n y C12 O4 86D sing 22 n n C4 C3 86D sing 23 n y C4 S1 86D sing 24 n n C3 C2 86D doub 25 n y S1 O2 86D doub 26 n n S1 O3 86D doub 27 n n S1 C16 86D sing 28 n n C16 F3 86D sing 29 n n C16 F4 86D sing 30 n n C7 H1 86D sing 31 n n C9 H2 86D sing 32 n n C5 H3 86D sing 33 n n C15 H4 86D sing 34 n n C15 H5 86D sing 35 n n C12 H6 86D sing 36 n n O4 H7 86D sing 37 n n C3 H8 86D sing 38 n n C2 H9 86D sing 39 n n C16 H12 86D sing 40 n n # _atom_sites.entry_id 5UFP _atom_sites.fract_transf_matrix[1][1] 0.013628 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004031 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025145 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 86D A 1 401 1 86D UNK . D 4 HOH A 1 501 11 HOH HOH . D 4 HOH A 2 502 23 HOH HOH . D 4 HOH A 3 503 15 HOH HOH . D 4 HOH A 4 504 30 HOH HOH . D 4 HOH A 5 505 22 HOH HOH . D 4 HOH A 6 506 54 HOH HOH . D 4 HOH A 7 507 21 HOH HOH . D 4 HOH A 8 508 42 HOH HOH . D 4 HOH A 9 509 38 HOH HOH . D 4 HOH A 10 510 40 HOH HOH . D 4 HOH A 11 511 1 HOH HOH . D 4 HOH A 12 512 26 HOH HOH . D 4 HOH A 13 513 14 HOH HOH . D 4 HOH A 14 514 27 HOH HOH . D 4 HOH A 15 515 6 HOH HOH . D 4 HOH A 16 516 46 HOH HOH . D 4 HOH A 17 517 31 HOH HOH . D 4 HOH A 18 518 29 HOH HOH . D 4 HOH A 19 519 39 HOH HOH . D 4 HOH A 20 520 55 HOH HOH . D 4 HOH A 21 521 37 HOH HOH . D 4 HOH A 22 522 58 HOH HOH . E 4 HOH B 1 501 19 HOH HOH . E 4 HOH B 2 502 33 HOH HOH . E 4 HOH B 3 503 52 HOH HOH . E 4 HOH B 4 504 10 HOH HOH . E 4 HOH B 5 505 56 HOH HOH . E 4 HOH B 6 506 5 HOH HOH . E 4 HOH B 7 507 44 HOH HOH . E 4 HOH B 8 508 17 HOH HOH . E 4 HOH B 9 509 51 HOH HOH . E 4 HOH B 10 510 53 HOH HOH . E 4 HOH B 11 511 3 HOH HOH . E 4 HOH B 12 512 2 HOH HOH . E 4 HOH B 13 513 24 HOH HOH . E 4 HOH B 14 514 47 HOH HOH . E 4 HOH B 15 515 34 HOH HOH . E 4 HOH B 16 516 13 HOH HOH . E 4 HOH B 17 517 16 HOH HOH . E 4 HOH B 18 518 41 HOH HOH . E 4 HOH B 19 519 20 HOH HOH . E 4 HOH B 20 520 9 HOH HOH . E 4 HOH B 21 521 48 HOH HOH . E 4 HOH B 22 522 36 HOH HOH . E 4 HOH B 23 523 18 HOH HOH . E 4 HOH B 24 524 28 HOH HOH . E 4 HOH B 25 525 43 HOH HOH . E 4 HOH B 26 526 4 HOH HOH . E 4 HOH B 27 527 8 HOH HOH . E 4 HOH B 28 528 49 HOH HOH . E 4 HOH B 29 529 32 HOH HOH . E 4 HOH B 30 530 57 HOH HOH . E 4 HOH B 31 531 35 HOH HOH . E 4 HOH B 32 532 12 HOH HOH . E 4 HOH B 33 533 25 HOH HOH . E 4 HOH B 34 534 59 HOH HOH . E 4 HOH B 35 535 50 HOH HOH . E 4 HOH B 36 536 7 HOH HOH . E 4 HOH B 37 537 45 HOH HOH . E 4 HOH B 38 538 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 86D . . . C 3 18.31 1.941 -8.716 1 28.78 ? N1 86D 401 A 1 HETATM 2 C C17 86D . . . C 3 18.912 1.127 -9.315 1 31.95 ? C17 86D 401 A 1 HETATM 3 C C6 86D . . . C 3 19.583 0.213 -9.963 1 26.91 ? C6 86D 401 A 1 HETATM 4 C C7 86D . . . C 3 20.885 0.509 -10.428 1 27.46 ? C7 86D 401 A 1 HETATM 5 C C8 86D . . . C 3 21.591 -0.477 -11.089 1 24.94 ? C8 86D 401 A 1 HETATM 6 C C9 86D . . . C 3 21.029 -1.737 -11.284 1 24.35 ? C9 86D 401 A 1 HETATM 7 C C10 86D . . . C 3 19.745 -2.033 -10.831 1 27.37 ? C10 86D 401 A 1 HETATM 8 F F1 86D . . . C 3 19.198 -3.27 -11.021 1 30.28 ? F1 86D 401 A 1 HETATM 9 C C5 86D . . . C 3 19.013 -1.052 -10.141 1 28.77 ? C5 86D 401 A 1 HETATM 10 O O1 86D . . . C 3 22.826 -0.118 -11.584 1 25.48 ? O1 86D 401 A 1 HETATM 11 C C1 86D . . . C 3 23.921 -0.267 -10.808 1 25.5 ? C1 86D 401 A 1 HETATM 12 C C14 86D . . . C 3 25.095 0.102 -11.412 1 27.09 ? C14 86D 401 A 1 HETATM 13 C C15 86D . . . C 3 25.26 0.61 -12.859 1 27.71 ? C15 86D 401 A 1 HETATM 14 C C11 86D . . . C 3 26.787 0.391 -13.028 1 33.58 ? C11 86D 401 A 1 HETATM 15 F F5 86D . . . C 3 27.224 1.338 -13.845 1 31.83 ? F5 86D 401 A 1 HETATM 16 F F2 86D . . . C 3 27.103 -0.79 -13.55 1 32.38 ? F2 86D 401 A 1 HETATM 17 C C13 86D . . . C 3 26.259 -0.105 -10.728 1 29.03 ? C13 86D 401 A 1 HETATM 18 C C12 86D . . . C 3 27.398 0.341 -11.627 1 32.32 ? C12 86D 401 A 1 HETATM 19 O O4 86D . . . C 3 27.761 1.684 -11.224 1 33.52 ? O4 86D 401 A 1 HETATM 20 C C4 86D . . . C 3 26.254 -0.639 -9.405 1 31.18 ? C4 86D 401 A 1 HETATM 21 C C3 86D . . . C 3 25.039 -0.94 -8.766 1 27.89 ? C3 86D 401 A 1 HETATM 22 C C2 86D . . . C 3 23.831 -0.723 -9.499 1 23.68 ? C2 86D 401 A 1 HETATM 23 S S1 86D . . . C 3 27.645 -0.897 -8.524 1 36.84 ? S1 86D 401 A 1 HETATM 24 O O2 86D . . . C 3 28.541 -1.407 -9.462 1 30.27 ? O2 86D 401 A 1 HETATM 25 O O3 86D . . . C 3 27.424 -1.918 -7.508 1 32.89 ? O3 86D 401 A 1 HETATM 26 C C16 86D . . . C 3 28.107 0.537 -7.865 1 35.17 ? C16 86D 401 A 1 HETATM 27 F F3 86D . . . C 3 27.365 0.572 -6.743 1 50.52 ? F3 86D 401 A 1 HETATM 28 F F4 86D . . . C 3 27.591 1.53 -8.596 1 53.6 ? F4 86D 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 692 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #