data_5UFQ # _model_server_result.job_id ly-SE-zwgAJ50VRb5BAnQA _model_server_result.datetime_utc '2024-11-05 00:36:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ufq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5UFQ # _exptl.entry_id 5UFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.33 _cell.angle_gamma 90 _cell.entry_id 5UFQ _cell.length_a 119.717 _cell.length_b 42.707 _cell.length_c 100.235 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,D,K,L,M,N,O,P,R,T 1 1 A,C,E,F,G,H,I,J,Q,S 2 1 B,K,L,M,N,O,R 3 1 D,P,T 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -39.695701 0 92.039701 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 3 A GLU 3 1_555 I CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc2 A OG SER 17 A SER 17 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc3 A OD1 ASP 30 A ASP 30 1_555 J CD CD . A CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc4 A OD2 ASP 30 A ASP 30 1_555 J CD CD . A CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc5 A OD1 ASP 33 A ASP 33 1_555 J CD CD . A CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc6 A O THR 35 A THR 35 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc7 A OG1 THR 35 A THR 35 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc8 A OE1 GLU 63 A GLU 63 1_555 J CD CD . A CD 206 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc9 A OE2 GLU 63 A GLU 63 1_555 J CD CD . A CD 206 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc10 A OE1 GLU 76 A GLU 76 1_555 I CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc11 A OE2 GLU 76 A GLU 76 1_555 I CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.071 ? metalc ? metalc12 A OE1 GLU 107 A GLU 107 1_555 I CA CA . A CA 205 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc13 A OE2 GLU 107 A GLU 107 1_555 I CA CA . A CA 205 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? metalc ? metalc14 E O1G GNP . A GNP 201 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc15 E O2B GNP . A GNP 201 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc16 F MG MG . A MG 202 1_555 Q O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc17 B O GLU 3 B GLU 3 1_555 N CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc18 B OG SER 17 B SER 17 1_555 L MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc19 B OD1 ASP 30 B ASP 30 1_555 O CD CD . B CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc20 B OD2 ASP 30 B ASP 30 1_555 O CD CD . B CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc21 B OD1 ASP 33 B ASP 33 1_555 O CD CD . B CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc22 B O THR 35 B THR 35 1_555 L MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc23 B OG1 THR 35 B THR 35 1_555 L MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.928 ? metalc ? metalc24 B OE1 GLU 63 B GLU 63 1_555 O CD CD . B CD 205 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc25 B OE2 GLU 63 B GLU 63 1_555 O CD CD . B CD 205 2_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc26 B OE1 GLU 76 B GLU 76 1_555 N CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc27 B OE2 GLU 76 B GLU 76 1_555 N CA CA . B CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.131 ? metalc ? metalc28 B OE2 GLU 107 B GLU 107 1_555 N CA CA . B CA 204 4_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc29 K O1G GNP . B GNP 201 1_555 L MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? metalc ? metalc30 K O2B GNP . B GNP 201 1_555 L MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc31 L MG MG . B MG 202 1_555 R O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5UFQ _atom_sites.fract_transf_matrix[1][1] 0.008353 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003603 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GNP A 1 201 201 GNP GNP . F 4 MG A 1 202 1 MG MG . G 5 CL A 1 203 4 CL CL . H 5 CL A 1 204 7 CL CL . I 6 CA A 1 205 1 CA CA . J 7 CD A 1 206 1 CD CD . K 3 GNP B 1 201 202 GNP GNP . L 4 MG B 1 202 2 MG MG . M 5 CL B 1 203 5 CL CL . N 6 CA B 1 204 2 CA CA . O 7 CD B 1 205 2 CD CD . P 5 CL D 1 101 6 CL CL . Q 8 HOH A 1 301 177 HOH HOH . Q 8 HOH A 2 302 98 HOH HOH . Q 8 HOH A 3 303 96 HOH HOH . Q 8 HOH A 4 304 135 HOH HOH . Q 8 HOH A 5 305 95 HOH HOH . Q 8 HOH A 6 306 112 HOH HOH . Q 8 HOH A 7 307 114 HOH HOH . Q 8 HOH A 8 308 79 HOH HOH . Q 8 HOH A 9 309 165 HOH HOH . Q 8 HOH A 10 310 99 HOH HOH . Q 8 HOH A 11 311 91 HOH HOH . Q 8 HOH A 12 312 97 HOH HOH . Q 8 HOH A 13 313 115 HOH HOH . Q 8 HOH A 14 314 113 HOH HOH . Q 8 HOH A 15 315 62 HOH HOH . Q 8 HOH A 16 316 21 HOH HOH . Q 8 HOH A 17 317 141 HOH HOH . Q 8 HOH A 18 318 53 HOH HOH . Q 8 HOH A 19 319 75 HOH HOH . Q 8 HOH A 20 320 185 HOH HOH . Q 8 HOH A 21 321 174 HOH HOH . Q 8 HOH A 22 322 88 HOH HOH . Q 8 HOH A 23 323 122 HOH HOH . Q 8 HOH A 24 324 89 HOH HOH . Q 8 HOH A 25 325 103 HOH HOH . Q 8 HOH A 26 326 102 HOH HOH . Q 8 HOH A 27 327 94 HOH HOH . Q 8 HOH A 28 328 153 HOH HOH . Q 8 HOH A 29 329 149 HOH HOH . Q 8 HOH A 30 330 93 HOH HOH . Q 8 HOH A 31 331 12 HOH HOH . Q 8 HOH A 32 332 131 HOH HOH . Q 8 HOH A 33 333 90 HOH HOH . Q 8 HOH A 34 334 136 HOH HOH . Q 8 HOH A 35 335 124 HOH HOH . Q 8 HOH A 36 336 158 HOH HOH . Q 8 HOH A 37 337 129 HOH HOH . Q 8 HOH A 38 338 146 HOH HOH . Q 8 HOH A 39 339 155 HOH HOH . Q 8 HOH A 40 340 184 HOH HOH . Q 8 HOH A 41 341 137 HOH HOH . Q 8 HOH A 42 342 109 HOH HOH . Q 8 HOH A 43 343 107 HOH HOH . Q 8 HOH A 44 344 188 HOH HOH . Q 8 HOH A 45 345 117 HOH HOH . Q 8 HOH A 46 346 139 HOH HOH . Q 8 HOH A 47 347 92 HOH HOH . Q 8 HOH A 48 348 144 HOH HOH . Q 8 HOH A 49 349 86 HOH HOH . Q 8 HOH A 50 350 142 HOH HOH . Q 8 HOH A 51 351 145 HOH HOH . R 8 HOH B 1 301 42 HOH HOH . R 8 HOH B 2 302 183 HOH HOH . R 8 HOH B 3 303 162 HOH HOH . R 8 HOH B 4 304 25 HOH HOH . R 8 HOH B 5 305 56 HOH HOH . R 8 HOH B 6 306 152 HOH HOH . R 8 HOH B 7 307 66 HOH HOH . R 8 HOH B 8 308 154 HOH HOH . R 8 HOH B 9 309 1 HOH HOH . R 8 HOH B 10 310 172 HOH HOH . R 8 HOH B 11 311 181 HOH HOH . R 8 HOH B 12 312 83 HOH HOH . R 8 HOH B 13 313 31 HOH HOH . R 8 HOH B 14 314 173 HOH HOH . R 8 HOH B 15 315 43 HOH HOH . R 8 HOH B 16 316 48 HOH HOH . R 8 HOH B 17 317 182 HOH HOH . R 8 HOH B 18 318 47 HOH HOH . R 8 HOH B 19 319 26 HOH HOH . R 8 HOH B 20 320 27 HOH HOH . R 8 HOH B 21 321 33 HOH HOH . R 8 HOH B 22 322 80 HOH HOH . R 8 HOH B 23 323 166 HOH HOH . R 8 HOH B 24 324 32 HOH HOH . R 8 HOH B 25 325 28 HOH HOH . R 8 HOH B 26 326 105 HOH HOH . R 8 HOH B 27 327 45 HOH HOH . R 8 HOH B 28 328 23 HOH HOH . R 8 HOH B 29 329 82 HOH HOH . R 8 HOH B 30 330 29 HOH HOH . R 8 HOH B 31 331 44 HOH HOH . R 8 HOH B 32 332 130 HOH HOH . R 8 HOH B 33 333 168 HOH HOH . R 8 HOH B 34 334 186 HOH HOH . R 8 HOH B 35 335 108 HOH HOH . R 8 HOH B 36 336 87 HOH HOH . R 8 HOH B 37 337 34 HOH HOH . R 8 HOH B 38 338 187 HOH HOH . R 8 HOH B 39 339 46 HOH HOH . R 8 HOH B 40 340 180 HOH HOH . R 8 HOH B 41 341 161 HOH HOH . R 8 HOH B 42 342 178 HOH HOH . R 8 HOH B 43 343 140 HOH HOH . R 8 HOH B 44 344 163 HOH HOH . R 8 HOH B 45 345 179 HOH HOH . R 8 HOH B 46 346 30 HOH HOH . R 8 HOH B 47 347 110 HOH HOH . R 8 HOH B 48 348 24 HOH HOH . R 8 HOH B 49 349 72 HOH HOH . S 8 HOH C 1 101 13 HOH HOH . S 8 HOH C 2 102 38 HOH HOH . S 8 HOH C 3 103 37 HOH HOH . T 8 HOH D 1 201 84 HOH HOH . T 8 HOH D 2 202 40 HOH HOH . T 8 HOH D 3 203 63 HOH HOH . T 8 HOH D 4 204 60 HOH HOH . T 8 HOH D 5 205 157 HOH HOH . T 8 HOH D 6 206 39 HOH HOH . T 8 HOH D 7 207 81 HOH HOH . T 8 HOH D 8 208 148 HOH HOH . T 8 HOH D 9 209 128 HOH HOH . T 8 HOH D 10 210 176 HOH HOH . T 8 HOH D 11 211 169 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 7.006 _atom_site.Cartn_y -0.211 _atom_site.Cartn_z -3.576 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #