data_5UGA
#
_model_server_result.job_id            1snCh-YgXQD-RmxkmL001A 
_model_server_result.datetime_utc      '2024-12-04 05:10:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5uga 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":9006}' 
#
_entry.id    5UGA 
#
_exptl.entry_id    5UGA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5UGA 
_cell.length_a            40.904 
_cell.length_b            69.595 
_cell.length_c            110.218 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UGA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 203 n n 
C1 C2 GOL sing 204 n n 
C1 H11 GOL sing 205 n n 
C1 H12 GOL sing 206 n n 
O1 HO1 GOL sing 207 n n 
C2 O2 GOL sing 208 n n 
C2 C3 GOL sing 209 n n 
C2 H2 GOL sing 210 n n 
O2 HO2 GOL sing 211 n n 
C3 O3 GOL sing 212 n n 
C3 H31 GOL sing 213 n n 
C3 H32 GOL sing 214 n n 
O3 HO3 GOL sing 215 n n 
#
_atom_sites.entry_id                     5UGA 
_atom_sites.fract_transf_matrix[1][1]    0.024447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014369 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009073 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 8BM A 1 9001 9001 8BM LIG . 
C 3 SO4 A 1 9002 9002 SO4 SO4 . 
D 3 SO4 A 1 9003 9003 SO4 SO4 . 
E 4 GOL A 1 9004 9004 GOL GOL . 
F 4 GOL A 1 9005 9005 GOL GOL . 
G 4 GOL A 1 9006 9006 GOL GOL . 
H 5 HOH A 1 9101 127 HOH WAT . 
H 5 HOH A 2 9102 68 HOH WAT . 
H 5 HOH A 3 9103 58 HOH WAT . 
H 5 HOH A 4 9104 154 HOH WAT . 
H 5 HOH A 5 9105 129 HOH WAT . 
H 5 HOH A 6 9106 139 HOH WAT . 
H 5 HOH A 7 9107 146 HOH WAT . 
H 5 HOH A 8 9108 48 HOH WAT . 
H 5 HOH A 9 9109 45 HOH WAT . 
H 5 HOH A 10 9110 78 HOH WAT . 
H 5 HOH A 11 9111 70 HOH WAT . 
H 5 HOH A 12 9112 148 HOH WAT . 
H 5 HOH A 13 9113 90 HOH WAT . 
H 5 HOH A 14 9114 31 HOH WAT . 
H 5 HOH A 15 9115 57 HOH WAT . 
H 5 HOH A 16 9116 79 HOH WAT . 
H 5 HOH A 17 9117 11 HOH WAT . 
H 5 HOH A 18 9118 110 HOH WAT . 
H 5 HOH A 19 9119 82 HOH WAT . 
H 5 HOH A 20 9120 39 HOH WAT . 
H 5 HOH A 21 9121 1 HOH WAT . 
H 5 HOH A 22 9122 29 HOH WAT . 
H 5 HOH A 23 9123 20 HOH WAT . 
H 5 HOH A 24 9124 19 HOH WAT . 
H 5 HOH A 25 9125 55 HOH WAT . 
H 5 HOH A 26 9126 10 HOH WAT . 
H 5 HOH A 27 9127 157 HOH WAT . 
H 5 HOH A 28 9128 52 HOH WAT . 
H 5 HOH A 29 9129 80 HOH WAT . 
H 5 HOH A 30 9130 103 HOH WAT . 
H 5 HOH A 31 9131 141 HOH WAT . 
H 5 HOH A 32 9132 106 HOH WAT . 
H 5 HOH A 33 9133 159 HOH WAT . 
H 5 HOH A 34 9134 92 HOH WAT . 
H 5 HOH A 35 9135 9 HOH WAT . 
H 5 HOH A 36 9136 46 HOH WAT . 
H 5 HOH A 37 9137 86 HOH WAT . 
H 5 HOH A 38 9138 123 HOH WAT . 
H 5 HOH A 39 9139 91 HOH WAT . 
H 5 HOH A 40 9140 8 HOH WAT . 
H 5 HOH A 41 9141 97 HOH WAT . 
H 5 HOH A 42 9142 111 HOH WAT . 
H 5 HOH A 43 9143 153 HOH WAT . 
H 5 HOH A 44 9144 32 HOH WAT . 
H 5 HOH A 45 9145 65 HOH WAT . 
H 5 HOH A 46 9146 101 HOH WAT . 
H 5 HOH A 47 9147 102 HOH WAT . 
H 5 HOH A 48 9148 128 HOH WAT . 
H 5 HOH A 49 9149 16 HOH WAT . 
H 5 HOH A 50 9150 94 HOH WAT . 
H 5 HOH A 51 9151 17 HOH WAT . 
H 5 HOH A 52 9152 30 HOH WAT . 
H 5 HOH A 53 9153 114 HOH WAT . 
H 5 HOH A 54 9154 67 HOH WAT . 
H 5 HOH A 55 9155 24 HOH WAT . 
H 5 HOH A 56 9156 22 HOH WAT . 
H 5 HOH A 57 9157 25 HOH WAT . 
H 5 HOH A 58 9158 34 HOH WAT . 
H 5 HOH A 59 9159 83 HOH WAT . 
H 5 HOH A 60 9160 108 HOH WAT . 
H 5 HOH A 61 9161 5 HOH WAT . 
H 5 HOH A 62 9162 56 HOH WAT . 
H 5 HOH A 63 9163 21 HOH WAT . 
H 5 HOH A 64 9164 3 HOH WAT . 
H 5 HOH A 65 9165 118 HOH WAT . 
H 5 HOH A 66 9166 2 HOH WAT . 
H 5 HOH A 67 9167 136 HOH WAT . 
H 5 HOH A 68 9168 12 HOH WAT . 
H 5 HOH A 69 9169 53 HOH WAT . 
H 5 HOH A 70 9170 109 HOH WAT . 
H 5 HOH A 71 9171 96 HOH WAT . 
H 5 HOH A 72 9172 125 HOH WAT . 
H 5 HOH A 73 9173 60 HOH WAT . 
H 5 HOH A 74 9174 77 HOH WAT . 
H 5 HOH A 75 9175 89 HOH WAT . 
H 5 HOH A 76 9176 14 HOH WAT . 
H 5 HOH A 77 9177 88 HOH WAT . 
H 5 HOH A 78 9178 76 HOH WAT . 
H 5 HOH A 79 9179 26 HOH WAT . 
H 5 HOH A 80 9180 63 HOH WAT . 
H 5 HOH A 81 9181 158 HOH WAT . 
H 5 HOH A 82 9182 40 HOH WAT . 
H 5 HOH A 83 9183 38 HOH WAT . 
H 5 HOH A 84 9184 35 HOH WAT . 
H 5 HOH A 85 9185 61 HOH WAT . 
H 5 HOH A 86 9186 51 HOH WAT . 
H 5 HOH A 87 9187 120 HOH WAT . 
H 5 HOH A 88 9188 28 HOH WAT . 
H 5 HOH A 89 9189 4 HOH WAT . 
H 5 HOH A 90 9190 99 HOH WAT . 
H 5 HOH A 91 9191 119 HOH WAT . 
H 5 HOH A 92 9192 122 HOH WAT . 
H 5 HOH A 93 9193 42 HOH WAT . 
H 5 HOH A 94 9194 18 HOH WAT . 
H 5 HOH A 95 9195 149 HOH WAT . 
H 5 HOH A 96 9196 81 HOH WAT . 
H 5 HOH A 97 9197 124 HOH WAT . 
H 5 HOH A 98 9198 13 HOH WAT . 
H 5 HOH A 99 9199 113 HOH WAT . 
H 5 HOH A 100 9200 152 HOH WAT . 
H 5 HOH A 101 9201 36 HOH WAT . 
H 5 HOH A 102 9202 107 HOH WAT . 
H 5 HOH A 103 9203 93 HOH WAT . 
H 5 HOH A 104 9204 72 HOH WAT . 
H 5 HOH A 105 9205 155 HOH WAT . 
H 5 HOH A 106 9206 116 HOH WAT . 
H 5 HOH A 107 9207 156 HOH WAT . 
H 5 HOH A 108 9208 98 HOH WAT . 
H 5 HOH A 109 9209 115 HOH WAT . 
H 5 HOH A 110 9210 126 HOH WAT . 
H 5 HOH A 111 9211 47 HOH WAT . 
H 5 HOH A 112 9212 54 HOH WAT . 
H 5 HOH A 113 9213 64 HOH WAT . 
H 5 HOH A 114 9214 15 HOH WAT . 
H 5 HOH A 115 9215 37 HOH WAT . 
H 5 HOH A 116 9216 100 HOH WAT . 
H 5 HOH A 117 9217 62 HOH WAT . 
H 5 HOH A 118 9218 27 HOH WAT . 
H 5 HOH A 119 9219 147 HOH WAT . 
H 5 HOH A 120 9220 71 HOH WAT . 
H 5 HOH A 121 9221 50 HOH WAT . 
H 5 HOH A 122 9222 74 HOH WAT . 
H 5 HOH A 123 9223 59 HOH WAT . 
H 5 HOH A 124 9224 66 HOH WAT . 
H 5 HOH A 125 9225 23 HOH WAT . 
H 5 HOH A 126 9226 6 HOH WAT . 
H 5 HOH A 127 9227 33 HOH WAT . 
H 5 HOH A 128 9228 7 HOH WAT . 
H 5 HOH A 129 9229 85 HOH WAT . 
H 5 HOH A 130 9230 69 HOH WAT . 
H 5 HOH A 131 9231 41 HOH WAT . 
H 5 HOH A 132 9232 44 HOH WAT . 
H 5 HOH A 133 9233 75 HOH WAT . 
H 5 HOH A 134 9234 49 HOH WAT . 
H 5 HOH A 135 9235 73 HOH WAT . 
H 5 HOH A 136 9236 104 HOH WAT . 
H 5 HOH A 137 9237 87 HOH WAT . 
H 5 HOH A 138 9238 105 HOH WAT . 
H 5 HOH A 139 9239 84 HOH WAT . 
H 5 HOH A 140 9240 130 HOH WAT . 
H 5 HOH A 141 9241 43 HOH WAT . 
H 5 HOH A 142 9242 121 HOH WAT . 
H 5 HOH A 143 9243 143 HOH WAT . 
H 5 HOH A 144 9244 142 HOH WAT . 
H 5 HOH A 145 9245 95 HOH WAT . 
H 5 HOH A 146 9246 117 HOH WAT . 
H 5 HOH A 147 9247 138 HOH WAT . 
H 5 HOH A 148 9248 112 HOH WAT . 
H 5 HOH A 149 9249 133 HOH WAT . 
H 5 HOH A 150 9250 140 HOH WAT . 
H 5 HOH A 151 9251 151 HOH WAT . 
H 5 HOH A 152 9252 144 HOH WAT . 
H 5 HOH A 153 9253 132 HOH WAT . 
H 5 HOH A 154 9254 145 HOH WAT . 
H 5 HOH A 155 9255 134 HOH WAT . 
H 5 HOH A 156 9256 137 HOH WAT . 
H 5 HOH A 157 9257 131 HOH WAT . 
H 5 HOH A 158 9258 160 HOH WAT . 
H 5 HOH A 159 9259 135 HOH WAT . 
H 5 HOH A 160 9260 150 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 4 1.749 -17.324 -40.747 1 55.51 ? C1 GOL 9006 A 1 
HETATM 2 O O1 GOL . . . G 4 2.126 -17.197 -39.37 1 55.88 ? O1 GOL 9006 A 1 
HETATM 3 C C2 GOL . . . G 4 1.999 -18.757 -41.244 1 54.81 ? C2 GOL 9006 A 1 
HETATM 4 O O2 GOL . . . G 4 0.751 -19.399 -41.519 1 53.08 ? O2 GOL 9006 A 1 
HETATM 5 C C3 GOL . . . G 4 2.861 -18.735 -42.512 1 54.68 ? C3 GOL 9006 A 1 
HETATM 6 O O3 GOL . . . G 4 3.225 -20.07 -42.867 1 55.38 ? O3 GOL 9006 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           6 
#