data_5UGT
#
_model_server_result.job_id            Qy8PCQpceV_hcUsaybejjQ 
_model_server_result.datetime_utc      '2024-11-07 14:34:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ugt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    5UGT 
#
_exptl.entry_id    5UGT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.26 
_cell.angle_gamma         90 
_cell.entry_id            5UGT 
_cell.length_a            87.924 
_cell.length_b            92.785 
_cell.length_c            180.426 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5UGT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     5UGT 
_atom_sites.fract_transf_matrix[1][1]    0.011373 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001448 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010778 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005587 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD A 1 301 2 NAD NAD . 
F 3 XTW A 1 302 1 XTW I04 . 
G 2 NAD B 1 301 3 NAD NAD . 
H 3 XTW B 1 302 4 XTW I04 . 
I 2 NAD E 1 301 1 NAD NAD . 
J 3 XTW E 1 302 2 XTW I04 . 
K 2 NAD G 1 301 4 NAD NAD . 
L 3 XTW G 1 302 3 XTW I04 . 
M 4 HOH A 1 401 245 HOH HOH . 
M 4 HOH A 2 402 256 HOH HOH . 
M 4 HOH A 3 403 47 HOH HOH . 
M 4 HOH A 4 404 223 HOH HOH . 
M 4 HOH A 5 405 93 HOH HOH . 
M 4 HOH A 6 406 261 HOH HOH . 
M 4 HOH A 7 407 280 HOH HOH . 
M 4 HOH A 8 408 304 HOH HOH . 
M 4 HOH A 9 409 45 HOH HOH . 
M 4 HOH A 10 410 317 HOH HOH . 
M 4 HOH A 11 411 290 HOH HOH . 
M 4 HOH A 12 412 107 HOH HOH . 
M 4 HOH A 13 413 232 HOH HOH . 
M 4 HOH A 14 414 277 HOH HOH . 
M 4 HOH A 15 415 27 HOH HOH . 
M 4 HOH A 16 416 146 HOH HOH . 
M 4 HOH A 17 417 30 HOH HOH . 
M 4 HOH A 18 418 165 HOH HOH . 
M 4 HOH A 19 419 76 HOH HOH . 
M 4 HOH A 20 420 143 HOH HOH . 
M 4 HOH A 21 421 178 HOH HOH . 
M 4 HOH A 22 422 311 HOH HOH . 
M 4 HOH A 23 423 327 HOH HOH . 
M 4 HOH A 24 424 291 HOH HOH . 
M 4 HOH A 25 425 50 HOH HOH . 
M 4 HOH A 26 426 26 HOH HOH . 
M 4 HOH A 27 427 121 HOH HOH . 
M 4 HOH A 28 428 312 HOH HOH . 
M 4 HOH A 29 429 171 HOH HOH . 
M 4 HOH A 30 430 11 HOH HOH . 
M 4 HOH A 31 431 276 HOH HOH . 
M 4 HOH A 32 432 302 HOH HOH . 
M 4 HOH A 33 433 293 HOH HOH . 
M 4 HOH A 34 434 213 HOH HOH . 
M 4 HOH A 35 435 289 HOH HOH . 
M 4 HOH A 36 436 286 HOH HOH . 
M 4 HOH A 37 437 250 HOH HOH . 
M 4 HOH A 38 438 309 HOH HOH . 
M 4 HOH A 39 439 248 HOH HOH . 
M 4 HOH A 40 440 249 HOH HOH . 
M 4 HOH A 41 441 260 HOH HOH . 
M 4 HOH A 42 442 287 HOH HOH . 
M 4 HOH A 43 443 295 HOH HOH . 
M 4 HOH A 44 444 283 HOH HOH . 
M 4 HOH A 45 445 196 HOH HOH . 
M 4 HOH A 46 446 247 HOH HOH . 
M 4 HOH A 47 447 284 HOH HOH . 
M 4 HOH A 48 448 294 HOH HOH . 
N 4 HOH B 1 401 219 HOH HOH . 
N 4 HOH B 2 402 306 HOH HOH . 
N 4 HOH B 3 403 112 HOH HOH . 
N 4 HOH B 4 404 113 HOH HOH . 
N 4 HOH B 5 405 81 HOH HOH . 
N 4 HOH B 6 406 241 HOH HOH . 
N 4 HOH B 7 407 329 HOH HOH . 
N 4 HOH B 8 408 125 HOH HOH . 
N 4 HOH B 9 409 126 HOH HOH . 
N 4 HOH B 10 410 8 HOH HOH . 
N 4 HOH B 11 411 181 HOH HOH . 
N 4 HOH B 12 412 308 HOH HOH . 
N 4 HOH B 13 413 106 HOH HOH . 
N 4 HOH B 14 414 262 HOH HOH . 
N 4 HOH B 15 415 15 HOH HOH . 
N 4 HOH B 16 416 144 HOH HOH . 
N 4 HOH B 17 417 16 HOH HOH . 
N 4 HOH B 18 418 266 HOH HOH . 
N 4 HOH B 19 419 263 HOH HOH . 
N 4 HOH B 20 420 267 HOH HOH . 
N 4 HOH B 21 421 72 HOH HOH . 
N 4 HOH B 22 422 265 HOH HOH . 
N 4 HOH B 23 423 305 HOH HOH . 
N 4 HOH B 24 424 59 HOH HOH . 
O 4 HOH E 1 401 177 HOH HOH . 
O 4 HOH E 2 402 234 HOH HOH . 
O 4 HOH E 3 403 270 HOH HOH . 
O 4 HOH E 4 404 58 HOH HOH . 
O 4 HOH E 5 405 240 HOH HOH . 
O 4 HOH E 6 406 63 HOH HOH . 
O 4 HOH E 7 407 326 HOH HOH . 
O 4 HOH E 8 408 324 HOH HOH . 
O 4 HOH E 9 409 254 HOH HOH . 
O 4 HOH E 10 410 328 HOH HOH . 
O 4 HOH E 11 411 174 HOH HOH . 
O 4 HOH E 12 412 55 HOH HOH . 
O 4 HOH E 13 413 22 HOH HOH . 
O 4 HOH E 14 414 310 HOH HOH . 
O 4 HOH E 15 415 66 HOH HOH . 
O 4 HOH E 16 416 255 HOH HOH . 
O 4 HOH E 17 417 325 HOH HOH . 
O 4 HOH E 18 418 264 HOH HOH . 
O 4 HOH E 19 419 323 HOH HOH . 
O 4 HOH E 20 420 268 HOH HOH . 
O 4 HOH E 21 421 77 HOH HOH . 
O 4 HOH E 22 422 31 HOH HOH . 
O 4 HOH E 23 423 321 HOH HOH . 
O 4 HOH E 24 424 135 HOH HOH . 
O 4 HOH E 25 425 282 HOH HOH . 
O 4 HOH E 26 426 315 HOH HOH . 
O 4 HOH E 27 427 210 HOH HOH . 
O 4 HOH E 28 428 275 HOH HOH . 
O 4 HOH E 29 429 173 HOH HOH . 
O 4 HOH E 30 430 279 HOH HOH . 
O 4 HOH E 31 431 313 HOH HOH . 
O 4 HOH E 32 432 301 HOH HOH . 
O 4 HOH E 33 433 298 HOH HOH . 
O 4 HOH E 34 434 319 HOH HOH . 
O 4 HOH E 35 435 297 HOH HOH . 
O 4 HOH E 36 436 296 HOH HOH . 
O 4 HOH E 37 437 41 HOH HOH . 
O 4 HOH E 38 438 320 HOH HOH . 
O 4 HOH E 39 439 269 HOH HOH . 
O 4 HOH E 40 440 318 HOH HOH . 
O 4 HOH E 41 441 299 HOH HOH . 
O 4 HOH E 42 442 300 HOH HOH . 
O 4 HOH E 43 443 307 HOH HOH . 
O 4 HOH E 44 444 288 HOH HOH . 
P 4 HOH G 1 401 20 HOH HOH . 
P 4 HOH G 2 402 1 HOH HOH . 
P 4 HOH G 3 403 97 HOH HOH . 
P 4 HOH G 4 404 9 HOH HOH . 
P 4 HOH G 5 405 330 HOH HOH . 
P 4 HOH G 6 406 21 HOH HOH . 
P 4 HOH G 7 407 322 HOH HOH . 
P 4 HOH G 8 408 331 HOH HOH . 
P 4 HOH G 9 409 163 HOH HOH . 
P 4 HOH G 10 410 132 HOH HOH . 
P 4 HOH G 11 411 239 HOH HOH . 
P 4 HOH G 12 412 7 HOH HOH . 
P 4 HOH G 13 413 70 HOH HOH . 
P 4 HOH G 14 414 273 HOH HOH . 
P 4 HOH G 15 415 316 HOH HOH . 
P 4 HOH G 16 416 252 HOH HOH . 
P 4 HOH G 17 417 253 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . G 2 -59.465 19.99 -49.294 1 73.9 ? PA NAD 301 B 1 
HETATM 2 O O1A NAD . . . G 2 -60.097 18.847 -48.611 1 93.86 ? O1A NAD 301 B 1 
HETATM 3 O O2A NAD . . . G 2 -60.456 21.109 -49.603 1 72.81 ? O2A NAD 301 B 1 
HETATM 4 O O5B NAD . . . G 2 -58.764 19.596 -50.68 1 59.22 ? O5B NAD 301 B 1 
HETATM 5 C C5B NAD . . . G 2 -57.834 18.511 -50.564 1 61.01 ? C5B NAD 301 B 1 
HETATM 6 C C4B NAD . . . G 2 -57.424 18.109 -51.951 1 70.99 ? C4B NAD 301 B 1 
HETATM 7 O O4B NAD . . . G 2 -56.685 16.878 -51.937 1 76.99 ? O4B NAD 301 B 1 
HETATM 8 C C3B NAD . . . G 2 -58.539 17.841 -52.959 1 77.61 ? C3B NAD 301 B 1 
HETATM 9 O O3B NAD . . . G 2 -58.913 19.101 -53.488 1 87.45 ? O3B NAD 301 B 1 
HETATM 10 C C2B NAD . . . G 2 -57.881 16.874 -53.981 1 80.23 ? C2B NAD 301 B 1 
HETATM 11 O O2B NAD . . . G 2 -57.638 17.374 -55.307 1 81.61 ? O2B NAD 301 B 1 
HETATM 12 C C1B NAD . . . G 2 -56.539 16.567 -53.307 1 76.6 ? C1B NAD 301 B 1 
HETATM 13 N N9A NAD . . . G 2 -56.067 15.206 -53.466 1 73.56 ? N9A NAD 301 B 1 
HETATM 14 C C8A NAD . . . G 2 -56.071 14.164 -52.576 1 75.15 ? C8A NAD 301 B 1 
HETATM 15 N N7A NAD . . . G 2 -55.44 13.097 -53.004 1 68.59 ? N7A NAD 301 B 1 
HETATM 16 C C5A NAD . . . G 2 -55.008 13.459 -54.271 1 70.39 ? C5A NAD 301 B 1 
HETATM 17 C C6A NAD . . . G 2 -54.201 12.805 -55.217 1 73.46 ? C6A NAD 301 B 1 
HETATM 18 N N6A NAD . . . G 2 -53.877 11.515 -55.14 1 76.62 ? N6A NAD 301 B 1 
HETATM 19 N N1A NAD . . . G 2 -53.801 13.513 -56.299 1 73.5 ? N1A NAD 301 B 1 
HETATM 20 C C2A NAD . . . G 2 -54.238 14.767 -56.443 1 71.67 ? C2A NAD 301 B 1 
HETATM 21 N N3A NAD . . . G 2 -55.061 15.463 -55.654 1 72.23 ? N3A NAD 301 B 1 
HETATM 22 C C4A NAD . . . G 2 -55.39 14.755 -54.567 1 71.1 ? C4A NAD 301 B 1 
HETATM 23 O O3 NAD . . . G 2 -58.379 20.619 -48.452 1 80.41 ? O3 NAD 301 B 1 
HETATM 24 P PN NAD . . . G 2 -57.394 21.654 -47.743 1 91.66 ? PN NAD 301 B 1 
HETATM 25 O O1N NAD . . . G 2 -57.737 21.717 -46.301 1 69.47 -1 O1N NAD 301 B 1 
HETATM 26 O O2N NAD . . . G 2 -57.394 22.867 -48.603 1 81.95 ? O2N NAD 301 B 1 
HETATM 27 O O5D NAD . . . G 2 -55.984 20.903 -47.808 1 79.5 ? O5D NAD 301 B 1 
HETATM 28 C C5D NAD . . . G 2 -55.063 21.03 -48.925 1 77.05 ? C5D NAD 301 B 1 
HETATM 29 C C4D NAD . . . G 2 -53.651 21.141 -48.4 1 68.52 ? C4D NAD 301 B 1 
HETATM 30 O O4D NAD . . . G 2 -53.641 22.079 -47.299 1 63.73 ? O4D NAD 301 B 1 
HETATM 31 C C3D NAD . . . G 2 -53.069 19.842 -47.831 1 64.98 ? C3D NAD 301 B 1 
HETATM 32 O O3D NAD . . . G 2 -51.675 19.662 -48.119 1 68.79 ? O3D NAD 301 B 1 
HETATM 33 C C2D NAD . . . G 2 -53.395 19.979 -46.339 1 58.17 ? C2D NAD 301 B 1 
HETATM 34 O O2D NAD . . . G 2 -52.463 19.354 -45.472 1 50.83 ? O2D NAD 301 B 1 
HETATM 35 C C1D NAD . . . G 2 -53.056 21.47 -46.225 1 59.05 ? C1D NAD 301 B 1 
HETATM 36 N N1N NAD . . . G 2 -53.505 22.125 -44.927 1 49.86 ? N1N NAD 301 B 1 
HETATM 37 C C2N NAD . . . G 2 -54.816 22.282 -44.586 1 50.7 ? C2N NAD 301 B 1 
HETATM 38 C C3N NAD . . . G 2 -55.129 22.859 -43.363 1 56.5 ? C3N NAD 301 B 1 
HETATM 39 C C7N NAD . . . G 2 -56.518 23.234 -42.922 1 55.93 ? C7N NAD 301 B 1 
HETATM 40 O O7N NAD . . . G 2 -56.717 23.587 -41.733 1 52.04 ? O7N NAD 301 B 1 
HETATM 41 N N7N NAD . . . G 2 -57.487 23.209 -43.819 1 58.39 ? N7N NAD 301 B 1 
HETATM 42 C C4N NAD . . . G 2 -54.089 23.21 -42.501 1 59.17 ? C4N NAD 301 B 1 
HETATM 43 C C5N NAD . . . G 2 -52.776 23.04 -42.89 1 55.15 ? C5N NAD 301 B 1 
HETATM 44 C C6N NAD . . . G 2 -52.504 22.507 -44.114 1 54.09 ? C6N NAD 301 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           44 
#