data_5UGU # _model_server_result.job_id V9qiaZ9bqb1rb6lUr5c1JA _model_server_result.datetime_utc '2024-11-29 11:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ugu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5UGU # _exptl.entry_id 5UGU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 332.356 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[4-[(4-cyclopropyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UGU _cell.length_a 90.655 _cell.length_b 90.655 _cell.length_c 182.88 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UGU _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 N4 O2' _chem_comp.formula_weight 332.356 _chem_comp.id XTV _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-[(4-cyclopropyl-1,2,3-triazol-1-yl)methyl]-2-oxidanyl-phenoxy]benzenecarbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAO CAU XTV sing 451 n y NAO NAP XTV doub 452 n y CAX CAM XTV sing 453 n n CAX CAU XTV sing 454 n n CAX CAL XTV sing 455 n n CAM CAL XTV sing 456 n n CAU CAK XTV doub 457 n y NAP NAY XTV sing 458 n y NAY CAK XTV sing 459 n y NAY CAN XTV sing 460 n n CAH CAI XTV doub 461 n y CAH CAS XTV sing 462 n y CAN CAS XTV sing 463 n n CAI CAV XTV sing 464 n y CAS CAJ XTV doub 465 n y CAV OAQ XTV sing 466 n n CAV CAR XTV doub 467 n y CAG CAE XTV doub 468 n y CAG CAW XTV sing 469 n y CAJ CAR XTV sing 470 n y CAE CAD XTV sing 471 n y OAQ CAW XTV sing 472 n n CAW CAT XTV doub 473 n y CAR OAB XTV sing 474 n n CAD CAF XTV doub 475 n y CAT CAF XTV sing 476 n y CAT CAC XTV sing 477 n n CAC NAA XTV trip 478 n n CAF H1 XTV sing 479 n n CAD H2 XTV sing 480 n n CAE H3 XTV sing 481 n n CAG H4 XTV sing 482 n n CAJ H5 XTV sing 483 n n OAB H6 XTV sing 484 n n CAI H7 XTV sing 485 n n CAH H8 XTV sing 486 n n CAN H9 XTV sing 487 n n CAN H10 XTV sing 488 n n CAK H11 XTV sing 489 n n CAX H12 XTV sing 490 n n CAL H13 XTV sing 491 n n CAL H14 XTV sing 492 n n CAM H15 XTV sing 493 n n CAM H16 XTV sing 494 n n # _atom_sites.entry_id 5UGU _atom_sites.fract_transf_matrix[1][1] 0.011031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 301 1 NAD NAD . C 3 XTV A 1 302 1 XTV I06 . D 4 HOH A 1 401 87 HOH HOH . D 4 HOH A 2 402 236 HOH HOH . D 4 HOH A 3 403 39 HOH HOH . D 4 HOH A 4 404 274 HOH HOH . D 4 HOH A 5 405 29 HOH HOH . D 4 HOH A 6 406 93 HOH HOH . D 4 HOH A 7 407 83 HOH HOH . D 4 HOH A 8 408 201 HOH HOH . D 4 HOH A 9 409 90 HOH HOH . D 4 HOH A 10 410 257 HOH HOH . D 4 HOH A 11 411 171 HOH HOH . D 4 HOH A 12 412 174 HOH HOH . D 4 HOH A 13 413 102 HOH HOH . D 4 HOH A 14 414 261 HOH HOH . D 4 HOH A 15 415 146 HOH HOH . D 4 HOH A 16 416 151 HOH HOH . D 4 HOH A 17 417 58 HOH HOH . D 4 HOH A 18 418 31 HOH HOH . D 4 HOH A 19 419 118 HOH HOH . D 4 HOH A 20 420 10 HOH HOH . D 4 HOH A 21 421 22 HOH HOH . D 4 HOH A 22 422 56 HOH HOH . D 4 HOH A 23 423 66 HOH HOH . D 4 HOH A 24 424 157 HOH HOH . D 4 HOH A 25 425 139 HOH HOH . D 4 HOH A 26 426 266 HOH HOH . D 4 HOH A 27 427 94 HOH HOH . D 4 HOH A 28 428 109 HOH HOH . D 4 HOH A 29 429 194 HOH HOH . D 4 HOH A 30 430 19 HOH HOH . D 4 HOH A 31 431 43 HOH HOH . D 4 HOH A 32 432 61 HOH HOH . D 4 HOH A 33 433 231 HOH HOH . D 4 HOH A 34 434 38 HOH HOH . D 4 HOH A 35 435 55 HOH HOH . D 4 HOH A 36 436 170 HOH HOH . D 4 HOH A 37 437 11 HOH HOH . D 4 HOH A 38 438 20 HOH HOH . D 4 HOH A 39 439 95 HOH HOH . D 4 HOH A 40 440 96 HOH HOH . D 4 HOH A 41 441 57 HOH HOH . D 4 HOH A 42 442 18 HOH HOH . D 4 HOH A 43 443 248 HOH HOH . D 4 HOH A 44 444 37 HOH HOH . D 4 HOH A 45 445 4 HOH HOH . D 4 HOH A 46 446 192 HOH HOH . D 4 HOH A 47 447 106 HOH HOH . D 4 HOH A 48 448 54 HOH HOH . D 4 HOH A 49 449 5 HOH HOH . D 4 HOH A 50 450 7 HOH HOH . D 4 HOH A 51 451 112 HOH HOH . D 4 HOH A 52 452 222 HOH HOH . D 4 HOH A 53 453 24 HOH HOH . D 4 HOH A 54 454 256 HOH HOH . D 4 HOH A 55 455 21 HOH HOH . D 4 HOH A 56 456 26 HOH HOH . D 4 HOH A 57 457 27 HOH HOH . D 4 HOH A 58 458 123 HOH HOH . D 4 HOH A 59 459 15 HOH HOH . D 4 HOH A 60 460 3 HOH HOH . D 4 HOH A 61 461 23 HOH HOH . D 4 HOH A 62 462 45 HOH HOH . D 4 HOH A 63 463 277 HOH HOH . D 4 HOH A 64 464 14 HOH HOH . D 4 HOH A 65 465 53 HOH HOH . D 4 HOH A 66 466 12 HOH HOH . D 4 HOH A 67 467 183 HOH HOH . D 4 HOH A 68 468 238 HOH HOH . D 4 HOH A 69 469 129 HOH HOH . D 4 HOH A 70 470 76 HOH HOH . D 4 HOH A 71 471 34 HOH HOH . D 4 HOH A 72 472 52 HOH HOH . D 4 HOH A 73 473 51 HOH HOH . D 4 HOH A 74 474 276 HOH HOH . D 4 HOH A 75 475 271 HOH HOH . D 4 HOH A 76 476 88 HOH HOH . D 4 HOH A 77 477 101 HOH HOH . D 4 HOH A 78 478 117 HOH HOH . D 4 HOH A 79 479 17 HOH HOH . D 4 HOH A 80 480 116 HOH HOH . D 4 HOH A 81 481 288 HOH HOH . D 4 HOH A 82 482 135 HOH HOH . D 4 HOH A 83 483 273 HOH HOH . D 4 HOH A 84 484 145 HOH HOH . D 4 HOH A 85 485 13 HOH HOH . D 4 HOH A 86 486 28 HOH HOH . D 4 HOH A 87 487 70 HOH HOH . D 4 HOH A 88 488 67 HOH HOH . D 4 HOH A 89 489 33 HOH HOH . D 4 HOH A 90 490 291 HOH HOH . D 4 HOH A 91 491 84 HOH HOH . D 4 HOH A 92 492 30 HOH HOH . D 4 HOH A 93 493 36 HOH HOH . D 4 HOH A 94 494 131 HOH HOH . D 4 HOH A 95 495 259 HOH HOH . D 4 HOH A 96 496 110 HOH HOH . D 4 HOH A 97 497 16 HOH HOH . D 4 HOH A 98 498 60 HOH HOH . D 4 HOH A 99 499 46 HOH HOH . D 4 HOH A 100 500 6 HOH HOH . D 4 HOH A 101 501 42 HOH HOH . D 4 HOH A 102 502 269 HOH HOH . D 4 HOH A 103 503 286 HOH HOH . D 4 HOH A 104 504 82 HOH HOH . D 4 HOH A 105 505 44 HOH HOH . D 4 HOH A 106 506 2 HOH HOH . D 4 HOH A 107 507 32 HOH HOH . D 4 HOH A 108 508 75 HOH HOH . D 4 HOH A 109 509 173 HOH HOH . D 4 HOH A 110 510 193 HOH HOH . D 4 HOH A 111 511 71 HOH HOH . D 4 HOH A 112 512 258 HOH HOH . D 4 HOH A 113 513 59 HOH HOH . D 4 HOH A 114 514 48 HOH HOH . D 4 HOH A 115 515 158 HOH HOH . D 4 HOH A 116 516 159 HOH HOH . D 4 HOH A 117 517 287 HOH HOH . D 4 HOH A 118 518 156 HOH HOH . D 4 HOH A 119 519 283 HOH HOH . D 4 HOH A 120 520 195 HOH HOH . D 4 HOH A 121 521 8 HOH HOH . D 4 HOH A 122 522 240 HOH HOH . D 4 HOH A 123 523 282 HOH HOH . D 4 HOH A 124 524 292 HOH HOH . D 4 HOH A 125 525 115 HOH HOH . D 4 HOH A 126 526 89 HOH HOH . D 4 HOH A 127 527 35 HOH HOH . D 4 HOH A 128 528 104 HOH HOH . D 4 HOH A 129 529 128 HOH HOH . D 4 HOH A 130 530 98 HOH HOH . D 4 HOH A 131 531 267 HOH HOH . D 4 HOH A 132 532 103 HOH HOH . D 4 HOH A 133 533 177 HOH HOH . D 4 HOH A 134 534 136 HOH HOH . D 4 HOH A 135 535 125 HOH HOH . D 4 HOH A 136 536 124 HOH HOH . D 4 HOH A 137 537 289 HOH HOH . D 4 HOH A 138 538 97 HOH HOH . D 4 HOH A 139 539 210 HOH HOH . D 4 HOH A 140 540 243 HOH HOH . D 4 HOH A 141 541 25 HOH HOH . D 4 HOH A 142 542 107 HOH HOH . D 4 HOH A 143 543 111 HOH HOH . D 4 HOH A 144 544 284 HOH HOH . D 4 HOH A 145 545 114 HOH HOH . D 4 HOH A 146 546 50 HOH HOH . D 4 HOH A 147 547 144 HOH HOH . D 4 HOH A 148 548 249 HOH HOH . D 4 HOH A 149 549 252 HOH HOH . D 4 HOH A 150 550 40 HOH HOH . D 4 HOH A 151 551 223 HOH HOH . D 4 HOH A 152 552 241 HOH HOH . D 4 HOH A 153 553 285 HOH HOH . D 4 HOH A 154 554 41 HOH HOH . D 4 HOH A 155 555 290 HOH HOH . D 4 HOH A 156 556 49 HOH HOH . D 4 HOH A 157 557 100 HOH HOH . D 4 HOH A 158 558 264 HOH HOH . D 4 HOH A 159 559 247 HOH HOH . D 4 HOH A 160 560 92 HOH HOH . D 4 HOH A 161 561 47 HOH HOH . D 4 HOH A 162 562 281 HOH HOH . D 4 HOH A 163 563 172 HOH HOH . D 4 HOH A 164 564 245 HOH HOH . D 4 HOH A 165 565 275 HOH HOH . D 4 HOH A 166 566 185 HOH HOH . D 4 HOH A 167 567 99 HOH HOH . D 4 HOH A 168 568 279 HOH HOH . D 4 HOH A 169 569 270 HOH HOH . D 4 HOH A 170 570 225 HOH HOH . D 4 HOH A 171 571 246 HOH HOH . D 4 HOH A 172 572 253 HOH HOH . D 4 HOH A 173 573 244 HOH HOH . D 4 HOH A 174 574 255 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAA XTV . . . C 3 -22.311 4.924 -10.037 1 35.37 ? NAA XTV 302 A 1 HETATM 2 C CAC XTV . . . C 3 -21.559 5.497 -10.458 1 39.56 ? CAC XTV 302 A 1 HETATM 3 C CAT XTV . . . C 3 -20.518 6.298 -11.044 1 32.88 ? CAT XTV 302 A 1 HETATM 4 C CAF XTV . . . C 3 -20.595 7.677 -10.863 1 33.73 ? CAF XTV 302 A 1 HETATM 5 C CAD XTV . . . C 3 -19.632 8.513 -11.418 1 33.04 ? CAD XTV 302 A 1 HETATM 6 C CAE XTV . . . C 3 -18.614 7.878 -12.128 1 31.99 ? CAE XTV 302 A 1 HETATM 7 C CAG XTV . . . C 3 -18.529 6.503 -12.389 1 31.16 ? CAG XTV 302 A 1 HETATM 8 C CAW XTV . . . C 3 -19.486 5.696 -11.785 1 32.23 ? CAW XTV 302 A 1 HETATM 9 O OAQ XTV . . . C 3 -19.538 4.327 -11.905 1 33.14 ? OAQ XTV 302 A 1 HETATM 10 C CAV XTV . . . C 3 -18.384 3.717 -12.391 1 35.48 ? CAV XTV 302 A 1 HETATM 11 C CAR XTV . . . C 3 -17.207 3.695 -11.598 1 32.29 ? CAR XTV 302 A 1 HETATM 12 C CAJ XTV . . . C 3 -16.072 3.095 -12.145 1 33.15 ? CAJ XTV 302 A 1 HETATM 13 O OAB XTV . . . C 3 -17.191 4.33 -10.376 1 28.55 ? OAB XTV 302 A 1 HETATM 14 C CAI XTV . . . C 3 -18.368 3.139 -13.646 1 34.32 ? CAI XTV 302 A 1 HETATM 15 C CAH XTV . . . C 3 -17.245 2.495 -14.153 1 34.72 ? CAH XTV 302 A 1 HETATM 16 C CAS XTV . . . C 3 -16.06 2.504 -13.405 1 33.18 ? CAS XTV 302 A 1 HETATM 17 C CAN XTV . . . C 3 -14.916 1.845 -13.896 1 34.01 ? CAN XTV 302 A 1 HETATM 18 N NAY XTV . . . C 3 -14.25 2.639 -14.938 1 33.29 ? NAY XTV 302 A 1 HETATM 19 C CAK XTV . . . C 3 -13.62 3.819 -14.93 1 32.68 ? CAK XTV 302 A 1 HETATM 20 N NAP XTV . . . C 3 -14.255 2.185 -16.133 1 38.7 ? NAP XTV 302 A 1 HETATM 21 N NAO XTV . . . C 3 -13.712 2.977 -16.925 1 36.17 ? NAO XTV 302 A 1 HETATM 22 C CAU XTV . . . C 3 -13.283 3.993 -16.221 1 37.32 ? CAU XTV 302 A 1 HETATM 23 C CAX XTV . . . C 3 -12.507 5.107 -16.896 1 37.95 ? CAX XTV 302 A 1 HETATM 24 C CAL XTV . . . C 3 -11.495 5.903 -16.15 1 38.91 ? CAL XTV 302 A 1 HETATM 25 C CAM XTV . . . C 3 -12.847 6.504 -16.44 1 37.4 ? CAM XTV 302 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 25 #