data_5UGV # _model_server_result.job_id oLcpE6m1_LqxGtk6lMI-Ig _model_server_result.datetime_utc '2024-12-21 11:38:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ugv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 5UGV # _exptl.entry_id 5UGV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5UGV _cell.length_a 85.507 _cell.length_b 88.566 _cell.length_c 77.629 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UGV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 85.507 88.566 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 299 n n C1 C2 PGE sing 300 n n C1 H1 PGE sing 301 n n C1 H12 PGE sing 302 n n O1 HO1 PGE sing 303 n n C2 O2 PGE sing 304 n n C2 H2 PGE sing 305 n n C2 H22 PGE sing 306 n n O2 C3 PGE sing 307 n n C3 C4 PGE sing 308 n n C3 H3 PGE sing 309 n n C3 H32 PGE sing 310 n n C4 O3 PGE sing 311 n n C4 H4 PGE sing 312 n n C4 H42 PGE sing 313 n n O4 C6 PGE sing 314 n n O4 HO4 PGE sing 315 n n C6 C5 PGE sing 316 n n C6 H6 PGE sing 317 n n C6 H62 PGE sing 318 n n C5 O3 PGE sing 319 n n C5 H5 PGE sing 320 n n C5 H52 PGE sing 321 n n # _atom_sites.entry_id 5UGV _atom_sites.fract_transf_matrix[1][1] 0.011695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012882 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 301 2 NAD NAI . D 3 SO4 A 1 302 1 SO4 SO4 . E 4 PGE A 1 303 1 PGE PG4 . F 4 PGE A 1 304 2 PGE PG4 . G 2 NAD B 1 301 1 NAD NAI . H 5 HOH A 1 401 39 HOH HOH . H 5 HOH A 2 402 181 HOH HOH . H 5 HOH A 3 403 34 HOH HOH . H 5 HOH A 4 404 21 HOH HOH . H 5 HOH A 5 405 45 HOH HOH . H 5 HOH A 6 406 38 HOH HOH . H 5 HOH A 7 407 60 HOH HOH . H 5 HOH A 8 408 100 HOH HOH . H 5 HOH A 9 409 53 HOH HOH . H 5 HOH A 10 410 133 HOH HOH . H 5 HOH A 11 411 30 HOH HOH . H 5 HOH A 12 412 68 HOH HOH . H 5 HOH A 13 413 179 HOH HOH . H 5 HOH A 14 414 17 HOH HOH . H 5 HOH A 15 415 44 HOH HOH . H 5 HOH A 16 416 59 HOH HOH . H 5 HOH A 17 417 15 HOH HOH . H 5 HOH A 18 418 46 HOH HOH . H 5 HOH A 19 419 193 HOH HOH . H 5 HOH A 20 420 76 HOH HOH . H 5 HOH A 21 421 51 HOH HOH . H 5 HOH A 22 422 216 HOH HOH . H 5 HOH A 23 423 103 HOH HOH . H 5 HOH A 24 424 198 HOH HOH . H 5 HOH A 25 425 161 HOH HOH . H 5 HOH A 26 426 57 HOH HOH . H 5 HOH A 27 427 196 HOH HOH . H 5 HOH A 28 428 35 HOH HOH . H 5 HOH A 29 429 49 HOH HOH . H 5 HOH A 30 430 16 HOH HOH . H 5 HOH A 31 431 119 HOH HOH . H 5 HOH A 32 432 121 HOH HOH . H 5 HOH A 33 433 207 HOH HOH . H 5 HOH A 34 434 62 HOH HOH . H 5 HOH A 35 435 7 HOH HOH . H 5 HOH A 36 436 194 HOH HOH . H 5 HOH A 37 437 220 HOH HOH . H 5 HOH A 38 438 87 HOH HOH . H 5 HOH A 39 439 104 HOH HOH . H 5 HOH A 40 440 180 HOH HOH . H 5 HOH A 41 441 29 HOH HOH . H 5 HOH A 42 442 82 HOH HOH . H 5 HOH A 43 443 134 HOH HOH . H 5 HOH A 44 444 55 HOH HOH . H 5 HOH A 45 445 88 HOH HOH . H 5 HOH A 46 446 128 HOH HOH . H 5 HOH A 47 447 77 HOH HOH . I 5 HOH B 1 401 32 HOH HOH . I 5 HOH B 2 402 202 HOH HOH . I 5 HOH B 3 403 188 HOH HOH . I 5 HOH B 4 404 218 HOH HOH . I 5 HOH B 5 405 42 HOH HOH . I 5 HOH B 6 406 47 HOH HOH . I 5 HOH B 7 407 217 HOH HOH . I 5 HOH B 8 408 6 HOH HOH . I 5 HOH B 9 409 10 HOH HOH . I 5 HOH B 10 410 200 HOH HOH . I 5 HOH B 11 411 190 HOH HOH . I 5 HOH B 12 412 215 HOH HOH . I 5 HOH B 13 413 50 HOH HOH . I 5 HOH B 14 414 197 HOH HOH . I 5 HOH B 15 415 187 HOH HOH . I 5 HOH B 16 416 191 HOH HOH . I 5 HOH B 17 417 90 HOH HOH . I 5 HOH B 18 418 24 HOH HOH . I 5 HOH B 19 419 177 HOH HOH . I 5 HOH B 20 420 67 HOH HOH . I 5 HOH B 21 421 13 HOH HOH . I 5 HOH B 22 422 199 HOH HOH . I 5 HOH B 23 423 63 HOH HOH . I 5 HOH B 24 424 52 HOH HOH . I 5 HOH B 25 425 185 HOH HOH . I 5 HOH B 26 426 130 HOH HOH . I 5 HOH B 27 427 206 HOH HOH . I 5 HOH B 28 428 204 HOH HOH . I 5 HOH B 29 429 22 HOH HOH . I 5 HOH B 30 430 36 HOH HOH . I 5 HOH B 31 431 93 HOH HOH . I 5 HOH B 32 432 203 HOH HOH . I 5 HOH B 33 433 48 HOH HOH . I 5 HOH B 34 434 69 HOH HOH . I 5 HOH B 35 435 106 HOH HOH . I 5 HOH B 36 436 183 HOH HOH . I 5 HOH B 37 437 178 HOH HOH . I 5 HOH B 38 438 184 HOH HOH . I 5 HOH B 39 439 43 HOH HOH . I 5 HOH B 40 440 201 HOH HOH . I 5 HOH B 41 441 219 HOH HOH . I 5 HOH B 42 442 186 HOH HOH . I 5 HOH B 43 443 205 HOH HOH . I 5 HOH B 44 444 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . E 4 45.337 44.151 36.703 1 48.96 ? C1 PGE 303 A 1 HETATM 2 O O1 PGE . . . E 4 44.587 44.871 37.708 1 52.75 ? O1 PGE 303 A 1 HETATM 3 C C2 PGE . . . E 4 45.711 45.079 35.591 1 46.66 ? C2 PGE 303 A 1 HETATM 4 O O2 PGE . . . E 4 46.354 44.292 34.569 1 51.63 ? O2 PGE 303 A 1 HETATM 5 C C3 PGE . . . E 4 46.928 45.172 33.563 1 50.11 ? C3 PGE 303 A 1 HETATM 6 C C4 PGE . . . E 4 47.702 44.36 32.535 1 52.38 ? C4 PGE 303 A 1 HETATM 7 C C5 PGE . . . E 4 47.466 42.928 30.637 1 51.72 ? C5 PGE 303 A 1 HETATM 8 O O3 PGE . . . E 4 46.736 43.82 31.607 1 54.01 ? O3 PGE 303 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 506 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #