data_5UHT # _model_server_result.job_id xB-yp98lC5rm1u67Kao3Gg _model_server_result.datetime_utc '2024-11-09 23:21:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":204}' # _entry.id 5UHT # _exptl.entry_id 5UHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.54 _cell.angle_gamma 90 _cell.entry_id 5UHT _cell.length_a 177.97 _cell.length_b 98.38 _cell.length_c 72.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 M N N ? 6 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 100 A CYS 330 1_555 A SG CYS 129 A CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? disulf ? disulf2 C SG CYS 100 C CYS 330 1_555 C SG CYS 129 C CYS 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? covale ? covale1 B C LEU 52 B LEU 52 1_555 B N BFD 53 B BFD 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 B C BFD 53 B BFD 53 1_555 B N ILE 54 B ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale3 D C LEU 52 D LEU 52 1_555 D N BFD 53 D BFD 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 D C BFD 53 D BFD 53 1_555 D N ILE 54 D ILE 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 B OD1 ASP 10 B ASP 10 1_555 M MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 B OD2 ASP 10 B ASP 10 1_555 M MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc3 B OD2 BFD 53 B BFD 53 1_555 M MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc4 B O MET 55 B MET 55 1_555 M MG MG . B MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc5 M MG MG . B MG 204 1_555 V O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc6 M MG MG . B MG 204 1_555 V O HOH . B HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc7 D OD1 ASP 10 D ASP 10 1_555 S MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc8 D OD2 ASP 10 D ASP 10 1_555 S MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc9 D OD2 BFD 53 D BFD 53 1_555 S MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc10 D O MET 55 D MET 55 1_555 S MG MG . D MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc11 S MG MG . D MG 202 1_555 X O HOH . D HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc12 S MG MG . D MG 202 1_555 X O HOH . D HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5UHT _atom_sites.fract_transf_matrix[1][1] 0.005619 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002106 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010165 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ADP A 1 501 500 ADP ADP . F 4 GOL A 1 502 1 GOL GOL . G 4 GOL A 1 503 2 GOL GOL . H 4 GOL A 1 504 7 GOL GOL . I 5 SO4 A 1 505 3 SO4 SO4 . J 4 GOL B 1 201 3 GOL GOL . K 4 GOL B 1 202 5 GOL GOL . L 4 GOL B 1 203 8 GOL GOL . M 6 MG B 1 204 1 MG MG . N 5 SO4 B 1 205 2 SO4 SO4 . O 3 ADP C 1 501 500 ADP ADP . P 4 GOL C 1 502 6 GOL GOL . Q 4 GOL C 1 503 9 GOL GOL . R 4 GOL D 1 201 4 GOL GOL . S 6 MG D 1 202 1 MG MG . T 5 SO4 D 1 203 1 SO4 SO4 . U 7 HOH A 1 601 70 HOH HOH . U 7 HOH A 2 602 22 HOH HOH . U 7 HOH A 3 603 48 HOH HOH . U 7 HOH A 4 604 30 HOH HOH . U 7 HOH A 5 605 86 HOH HOH . U 7 HOH A 6 606 55 HOH HOH . U 7 HOH A 7 607 35 HOH HOH . U 7 HOH A 8 608 85 HOH HOH . U 7 HOH A 9 609 78 HOH HOH . U 7 HOH A 10 610 80 HOH HOH . U 7 HOH A 11 611 13 HOH HOH . U 7 HOH A 12 612 68 HOH HOH . U 7 HOH A 13 613 49 HOH HOH . U 7 HOH A 14 614 34 HOH HOH . U 7 HOH A 15 615 52 HOH HOH . U 7 HOH A 16 616 8 HOH HOH . U 7 HOH A 17 617 50 HOH HOH . U 7 HOH A 18 618 67 HOH HOH . U 7 HOH A 19 619 79 HOH HOH . U 7 HOH A 20 620 33 HOH HOH . U 7 HOH A 21 621 11 HOH HOH . U 7 HOH A 22 622 18 HOH HOH . U 7 HOH A 23 623 6 HOH HOH . U 7 HOH A 24 624 69 HOH HOH . U 7 HOH A 25 625 40 HOH HOH . U 7 HOH A 26 626 41 HOH HOH . U 7 HOH A 27 627 47 HOH HOH . U 7 HOH A 28 628 89 HOH HOH . V 7 HOH B 1 301 24 HOH HOH . V 7 HOH B 2 302 14 HOH HOH . V 7 HOH B 3 303 16 HOH HOH . V 7 HOH B 4 304 38 HOH HOH . V 7 HOH B 5 305 71 HOH HOH . V 7 HOH B 6 306 2 HOH HOH . V 7 HOH B 7 307 76 HOH HOH . V 7 HOH B 8 308 19 HOH HOH . V 7 HOH B 9 309 29 HOH HOH . V 7 HOH B 10 310 53 HOH HOH . V 7 HOH B 11 311 15 HOH HOH . V 7 HOH B 12 312 37 HOH HOH . V 7 HOH B 13 313 65 HOH HOH . V 7 HOH B 14 314 5 HOH HOH . V 7 HOH B 15 315 77 HOH HOH . V 7 HOH B 16 316 20 HOH HOH . V 7 HOH B 17 317 32 HOH HOH . W 7 HOH C 1 601 74 HOH HOH . W 7 HOH C 2 602 12 HOH HOH . W 7 HOH C 3 603 81 HOH HOH . W 7 HOH C 4 604 17 HOH HOH . W 7 HOH C 5 605 57 HOH HOH . W 7 HOH C 6 606 84 HOH HOH . W 7 HOH C 7 607 28 HOH HOH . W 7 HOH C 8 608 23 HOH HOH . W 7 HOH C 9 609 72 HOH HOH . W 7 HOH C 10 610 3 HOH HOH . W 7 HOH C 11 611 54 HOH HOH . W 7 HOH C 12 612 58 HOH HOH . W 7 HOH C 13 613 27 HOH HOH . W 7 HOH C 14 614 7 HOH HOH . W 7 HOH C 15 615 43 HOH HOH . W 7 HOH C 16 616 56 HOH HOH . W 7 HOH C 17 617 61 HOH HOH . W 7 HOH C 18 618 51 HOH HOH . W 7 HOH C 19 619 73 HOH HOH . W 7 HOH C 20 620 21 HOH HOH . W 7 HOH C 21 621 63 HOH HOH . W 7 HOH C 22 622 82 HOH HOH . W 7 HOH C 23 623 45 HOH HOH . W 7 HOH C 24 624 42 HOH HOH . W 7 HOH C 25 625 39 HOH HOH . W 7 HOH C 26 626 83 HOH HOH . X 7 HOH D 1 301 59 HOH HOH . X 7 HOH D 2 302 87 HOH HOH . X 7 HOH D 3 303 31 HOH HOH . X 7 HOH D 4 304 26 HOH HOH . X 7 HOH D 5 305 25 HOH HOH . X 7 HOH D 6 306 62 HOH HOH . X 7 HOH D 7 307 66 HOH HOH . X 7 HOH D 8 308 4 HOH HOH . X 7 HOH D 9 309 10 HOH HOH . X 7 HOH D 10 310 75 HOH HOH . X 7 HOH D 11 311 1 HOH HOH . X 7 HOH D 12 312 64 HOH HOH . X 7 HOH D 13 313 44 HOH HOH . X 7 HOH D 14 314 88 HOH HOH . X 7 HOH D 15 315 60 HOH HOH . X 7 HOH D 16 316 36 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 6 _atom_site.Cartn_x -31.047 _atom_site.Cartn_y 19.75 _atom_site.Cartn_z 4.867 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 204 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #