data_5UHZ # _model_server_result.job_id eromTBIoYrh4LMj7sQ5hCg _model_server_result.datetime_utc '2024-11-28 13:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uhz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 5UHZ # _exptl.entry_id 5UHZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.99 _cell.angle_gamma 90 _cell.entry_id 5UHZ _cell.length_a 138.763 _cell.length_b 114.183 _cell.length_c 66.158 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UHZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TRP 24 A TRP 24 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc2 A O LYS 25 A LYS 25 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc3 A O VAL 27 A VAL 27 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 A O ALA 30 A ALA 30 1_555 E MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc5 E MG MG . A MG 403 1_555 I O HOH . A HOH 557 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc6 B O TRP 24 B TRP 24 1_555 H MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc7 B O LYS 25 B LYS 25 1_555 H MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc8 B O VAL 27 B VAL 27 1_555 H MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc9 B O ALA 30 B ALA 30 1_555 H MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 255 n n PA O2A NAD sing 256 n n PA O5B NAD sing 257 n n PA O3 NAD sing 258 n n O2A HOA2 NAD sing 259 n n O5B C5B NAD sing 260 n n C5B C4B NAD sing 261 n n C5B H51A NAD sing 262 n n C5B H52A NAD sing 263 n n C4B O4B NAD sing 264 n n C4B C3B NAD sing 265 n n C4B H4B NAD sing 266 n n O4B C1B NAD sing 267 n n C3B O3B NAD sing 268 n n C3B C2B NAD sing 269 n n C3B H3B NAD sing 270 n n O3B HO3A NAD sing 271 n n C2B O2B NAD sing 272 n n C2B C1B NAD sing 273 n n C2B H2B NAD sing 274 n n O2B HO2A NAD sing 275 n n C1B N9A NAD sing 276 n n C1B H1B NAD sing 277 n n N9A C8A NAD sing 278 n y N9A C4A NAD sing 279 n y C8A N7A NAD doub 280 n y C8A H8A NAD sing 281 n n N7A C5A NAD sing 282 n y C5A C6A NAD sing 283 n y C5A C4A NAD doub 284 n y C6A N6A NAD sing 285 n n C6A N1A NAD doub 286 n y N6A H61A NAD sing 287 n n N6A H62A NAD sing 288 n n N1A C2A NAD sing 289 n y C2A N3A NAD doub 290 n y C2A H2A NAD sing 291 n n N3A C4A NAD sing 292 n y O3 PN NAD sing 293 n n PN O1N NAD doub 294 n n PN O2N NAD sing 295 n n PN O5D NAD sing 296 n n O5D C5D NAD sing 297 n n C5D C4D NAD sing 298 n n C5D H51N NAD sing 299 n n C5D H52N NAD sing 300 n n C4D O4D NAD sing 301 n n C4D C3D NAD sing 302 n n C4D H4D NAD sing 303 n n O4D C1D NAD sing 304 n n C3D O3D NAD sing 305 n n C3D C2D NAD sing 306 n n C3D H3D NAD sing 307 n n O3D HO3N NAD sing 308 n n C2D O2D NAD sing 309 n n C2D C1D NAD sing 310 n n C2D H2D NAD sing 311 n n O2D HO2N NAD sing 312 n n C1D N1N NAD sing 313 n n C1D H1D NAD sing 314 n n N1N C2N NAD sing 315 n y N1N C6N NAD doub 316 n y C2N C3N NAD doub 317 n y C2N H2N NAD sing 318 n n C3N C7N NAD sing 319 n n C3N C4N NAD sing 320 n y C7N O7N NAD doub 321 n n C7N N7N NAD sing 322 n n N7N H71N NAD sing 323 n n N7N H72N NAD sing 324 n n C4N C5N NAD doub 325 n y C4N H4N NAD sing 326 n n C5N C6N NAD sing 327 n y C5N H5N NAD sing 328 n n C6N H6N NAD sing 329 n n # _atom_sites.entry_id 5UHZ _atom_sites.fract_transf_matrix[1][1] 0.007207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000629 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008758 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 401 346 NAD NAD . D 3 89Y A 1 402 347 89Y 89Y . E 4 MG A 1 403 348 MG MG . F 2 NAD B 1 401 346 NAD NAD . G 3 89Y B 1 402 347 89Y 89Y . H 4 MG B 1 403 348 MG MG . I 5 HOH A 1 501 62 HOH HOH . I 5 HOH A 2 502 81 HOH HOH . I 5 HOH A 3 503 73 HOH HOH . I 5 HOH A 4 504 64 HOH HOH . I 5 HOH A 5 505 102 HOH HOH . I 5 HOH A 6 506 72 HOH HOH . I 5 HOH A 7 507 84 HOH HOH . I 5 HOH A 8 508 34 HOH HOH . I 5 HOH A 9 509 45 HOH HOH . I 5 HOH A 10 510 21 HOH HOH . I 5 HOH A 11 511 70 HOH HOH . I 5 HOH A 12 512 92 HOH HOH . I 5 HOH A 13 513 68 HOH HOH . I 5 HOH A 14 514 108 HOH HOH . I 5 HOH A 15 515 63 HOH HOH . I 5 HOH A 16 516 66 HOH HOH . I 5 HOH A 17 517 95 HOH HOH . I 5 HOH A 18 518 56 HOH HOH . I 5 HOH A 19 519 96 HOH HOH . I 5 HOH A 20 520 59 HOH HOH . I 5 HOH A 21 521 52 HOH HOH . I 5 HOH A 22 522 98 HOH HOH . I 5 HOH A 23 523 65 HOH HOH . I 5 HOH A 24 524 20 HOH HOH . I 5 HOH A 25 525 67 HOH HOH . I 5 HOH A 26 526 80 HOH HOH . I 5 HOH A 27 527 83 HOH HOH . I 5 HOH A 28 528 58 HOH HOH . I 5 HOH A 29 529 69 HOH HOH . I 5 HOH A 30 530 82 HOH HOH . I 5 HOH A 31 531 48 HOH HOH . I 5 HOH A 32 532 9 HOH HOH . I 5 HOH A 33 533 26 HOH HOH . I 5 HOH A 34 534 90 HOH HOH . I 5 HOH A 35 535 3 HOH HOH . I 5 HOH A 36 536 11 HOH HOH . I 5 HOH A 37 537 107 HOH HOH . I 5 HOH A 38 538 60 HOH HOH . I 5 HOH A 39 539 37 HOH HOH . I 5 HOH A 40 540 76 HOH HOH . I 5 HOH A 41 541 47 HOH HOH . I 5 HOH A 42 542 79 HOH HOH . I 5 HOH A 43 543 35 HOH HOH . I 5 HOH A 44 544 101 HOH HOH . I 5 HOH A 45 545 14 HOH HOH . I 5 HOH A 46 546 17 HOH HOH . I 5 HOH A 47 547 13 HOH HOH . I 5 HOH A 48 548 42 HOH HOH . I 5 HOH A 49 549 74 HOH HOH . I 5 HOH A 50 550 77 HOH HOH . I 5 HOH A 51 551 40 HOH HOH . I 5 HOH A 52 552 87 HOH HOH . I 5 HOH A 53 553 16 HOH HOH . I 5 HOH A 54 554 104 HOH HOH . I 5 HOH A 55 555 89 HOH HOH . I 5 HOH A 56 556 78 HOH HOH . I 5 HOH A 57 557 29 HOH HOH . I 5 HOH A 58 558 97 HOH HOH . I 5 HOH A 59 559 49 HOH HOH . I 5 HOH A 60 560 93 HOH HOH . J 5 HOH B 1 501 94 HOH HOH . J 5 HOH B 2 502 12 HOH HOH . J 5 HOH B 3 503 5 HOH HOH . J 5 HOH B 4 504 86 HOH HOH . J 5 HOH B 5 505 33 HOH HOH . J 5 HOH B 6 506 51 HOH HOH . J 5 HOH B 7 507 50 HOH HOH . J 5 HOH B 8 508 39 HOH HOH . J 5 HOH B 9 509 43 HOH HOH . J 5 HOH B 10 510 53 HOH HOH . J 5 HOH B 11 511 1 HOH HOH . J 5 HOH B 12 512 100 HOH HOH . J 5 HOH B 13 513 6 HOH HOH . J 5 HOH B 14 514 85 HOH HOH . J 5 HOH B 15 515 8 HOH HOH . J 5 HOH B 16 516 54 HOH HOH . J 5 HOH B 17 517 10 HOH HOH . J 5 HOH B 18 518 24 HOH HOH . J 5 HOH B 19 519 99 HOH HOH . J 5 HOH B 20 520 55 HOH HOH . J 5 HOH B 21 521 38 HOH HOH . J 5 HOH B 22 522 19 HOH HOH . J 5 HOH B 23 523 30 HOH HOH . J 5 HOH B 24 524 22 HOH HOH . J 5 HOH B 25 525 106 HOH HOH . J 5 HOH B 26 526 4 HOH HOH . J 5 HOH B 27 527 15 HOH HOH . J 5 HOH B 28 528 2 HOH HOH . J 5 HOH B 29 529 46 HOH HOH . J 5 HOH B 30 530 27 HOH HOH . J 5 HOH B 31 531 103 HOH HOH . J 5 HOH B 32 532 91 HOH HOH . J 5 HOH B 33 533 31 HOH HOH . J 5 HOH B 34 534 7 HOH HOH . J 5 HOH B 35 535 18 HOH HOH . J 5 HOH B 36 536 57 HOH HOH . J 5 HOH B 37 537 32 HOH HOH . J 5 HOH B 38 538 25 HOH HOH . J 5 HOH B 39 539 75 HOH HOH . J 5 HOH B 40 540 88 HOH HOH . J 5 HOH B 41 541 36 HOH HOH . J 5 HOH B 42 542 41 HOH HOH . J 5 HOH B 43 543 23 HOH HOH . J 5 HOH B 44 544 28 HOH HOH . J 5 HOH B 45 545 105 HOH HOH . J 5 HOH B 46 546 44 HOH HOH . J 5 HOH B 47 547 61 HOH HOH . J 5 HOH B 48 548 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . F 2 23.879 -71.685 -19.15 1 59.06 ? PA NAD 401 B 1 HETATM 2 O O1A NAD . . . F 2 24.718 -72.554 -18.247 1 60.45 ? O1A NAD 401 B 1 HETATM 3 O O2A NAD . . . F 2 22.374 -71.804 -19.105 1 61.16 ? O2A NAD 401 B 1 HETATM 4 O O5B NAD . . . F 2 24.335 -71.944 -20.665 1 62 ? O5B NAD 401 B 1 HETATM 5 C C5B NAD . . . F 2 25.689 -71.943 -21.1 1 63.01 ? C5B NAD 401 B 1 HETATM 6 C C4B NAD . . . F 2 25.804 -73.009 -22.181 1 60 ? C4B NAD 401 B 1 HETATM 7 O O4B NAD . . . F 2 27.021 -72.842 -22.906 1 62.44 ? O4B NAD 401 B 1 HETATM 8 C C3B NAD . . . F 2 25.803 -74.423 -21.614 1 62.36 ? C3B NAD 401 B 1 HETATM 9 O O3B NAD . . . F 2 24.732 -75.18 -22.19 1 63.4 ? O3B NAD 401 B 1 HETATM 10 C C2B NAD . . . F 2 27.165 -74.998 -21.963 1 64.14 ? C2B NAD 401 B 1 HETATM 11 O O2B NAD . . . F 2 27.085 -76.375 -22.343 1 69.17 ? O2B NAD 401 B 1 HETATM 12 C C1B NAD . . . F 2 27.635 -74.116 -23.111 1 64.39 ? C1B NAD 401 B 1 HETATM 13 N N9A NAD . . . F 2 29.101 -73.923 -23.224 1 63.55 ? N9A NAD 401 B 1 HETATM 14 C C8A NAD . . . F 2 29.958 -73.531 -22.261 1 63.91 ? C8A NAD 401 B 1 HETATM 15 N N7A NAD . . . F 2 31.221 -73.436 -22.754 1 65.79 ? N7A NAD 401 B 1 HETATM 16 C C5A NAD . . . F 2 31.179 -73.765 -24.059 1 68.42 ? C5A NAD 401 B 1 HETATM 17 C C6A NAD . . . F 2 32.142 -73.878 -25.185 1 66.31 ? C6A NAD 401 B 1 HETATM 18 N N6A NAD . . . F 2 33.457 -73.617 -25.014 1 69.98 ? N6A NAD 401 B 1 HETATM 19 N N1A NAD . . . F 2 31.667 -74.254 -26.398 1 69.24 ? N1A NAD 401 B 1 HETATM 20 C C2A NAD . . . F 2 30.361 -74.525 -26.606 1 68.19 ? C2A NAD 401 B 1 HETATM 21 N N3A NAD . . . F 2 29.436 -74.441 -25.628 1 66 ? N3A NAD 401 B 1 HETATM 22 C C4A NAD . . . F 2 29.774 -74.075 -24.363 1 67.45 ? C4A NAD 401 B 1 HETATM 23 O O3 NAD . . . F 2 24.316 -70.147 -18.951 1 59.9 ? O3 NAD 401 B 1 HETATM 24 P PN NAD . . . F 2 23.237 -68.955 -19.035 1 57.25 ? PN NAD 401 B 1 HETATM 25 O O1N NAD . . . F 2 22.484 -68.896 -17.729 1 55.1 ? O1N NAD 401 B 1 HETATM 26 O O2N NAD . . . F 2 22.496 -69.084 -20.343 1 64.25 ? O2N NAD 401 B 1 HETATM 27 O O5D NAD . . . F 2 24.168 -67.658 -19.123 1 50.68 ? O5D NAD 401 B 1 HETATM 28 C C5D NAD . . . F 2 25.157 -67.561 -20.133 1 49.72 ? C5D NAD 401 B 1 HETATM 29 C C4D NAD . . . F 2 25.708 -66.147 -20.108 1 54.79 ? C4D NAD 401 B 1 HETATM 30 O O4D NAD . . . F 2 24.628 -65.23 -20.295 1 59.53 ? O4D NAD 401 B 1 HETATM 31 C C3D NAD . . . F 2 26.37 -65.811 -18.776 1 57.08 ? C3D NAD 401 B 1 HETATM 32 O O3D NAD . . . F 2 27.66 -65.231 -18.997 1 56.23 ? O3D NAD 401 B 1 HETATM 33 C C2D NAD . . . F 2 25.422 -64.828 -18.112 1 59.88 ? C2D NAD 401 B 1 HETATM 34 O O2D NAD . . . F 2 26.12 -63.852 -17.333 1 63.23 ? O2D NAD 401 B 1 HETATM 35 C C1D NAD . . . F 2 24.67 -64.213 -19.295 1 59.25 ? C1D NAD 401 B 1 HETATM 36 N N1N NAD . . . F 2 23.302 -63.718 -19.029 1 55.99 ? N1N NAD 401 B 1 HETATM 37 C C2N NAD . . . F 2 22.971 -62.503 -19.515 1 53.41 ? C2N NAD 401 B 1 HETATM 38 C C3N NAD . . . F 2 21.71 -61.947 -19.325 1 54.41 ? C3N NAD 401 B 1 HETATM 39 C C7N NAD . . . F 2 21.405 -60.586 -19.896 1 60.66 ? C7N NAD 401 B 1 HETATM 40 O O7N NAD . . . F 2 21.918 -60.263 -20.959 1 58.71 ? O7N NAD 401 B 1 HETATM 41 N N7N NAD . . . F 2 20.58 -59.746 -19.27 1 66.11 ? N7N NAD 401 B 1 HETATM 42 C C4N NAD . . . F 2 20.766 -62.681 -18.612 1 56.35 ? C4N NAD 401 B 1 HETATM 43 C C5N NAD . . . F 2 21.11 -63.942 -18.123 1 53.76 ? C5N NAD 401 B 1 HETATM 44 C C6N NAD . . . F 2 22.391 -64.447 -18.348 1 54.51 ? C6N NAD 401 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 44 #