data_5UIH # _model_server_result.job_id 6fMbpVXC-wW0LfAXPUTzHw _model_server_result.datetime_utc '2024-11-24 14:11:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5uih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5UIH # _exptl.entry_id 5UIH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 205.26 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-(2-phenylethyl)imidodicarbonimidic diamide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.45 _cell.angle_gamma 90 _cell.entry_id 5UIH _cell.length_a 38.605 _cell.length_b 58.872 _cell.length_c 40.145 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 152 A CYS 152 1_555 E S2 BME . A BME 204 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.024 ? covale ? covale2 A SG CYS 152 A CYS 152 1_555 E S2 BME . A BME 204 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 C NA NA . A NA 202 1_555 G O HOH . A HOH 327 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc2 C NA NA . A NA 202 1_555 G O HOH . A HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc3 C NA NA . A NA 202 1_555 G O HOH . A HOH 366 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc4 C NA NA . A NA 202 1_555 G O HOH . A HOH 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc5 C NA NA . A NA 202 1_555 G O HOH . A HOH 401 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc6 C NA NA . A NA 202 1_555 G O HOH . A HOH 448 2_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? # _chem_comp.formula 'C10 H15 N5' _chem_comp.formula_weight 205.26 _chem_comp.id 8CV _chem_comp.mon_nstd_flag . _chem_comp.name 'N-(2-phenylethyl)imidodicarbonimidic diamide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C3 8CV doub 1 n y C6 C8 8CV sing 2 n y C3 C1 8CV sing 3 n y C8 C7 8CV doub 4 n y C1 C2 8CV sing 5 n n C1 C4 8CV doub 6 n y C7 C4 8CV sing 7 n y C2 C5 8CV sing 8 n n C5 N1 8CV sing 9 n n N1 C9 8CV sing 10 n n C9 N3 8CV doub 11 n n C9 N2 8CV sing 12 n n N4 C10 8CV doub 13 n n N2 C10 8CV sing 14 n n C10 N5 8CV sing 15 n n C2 H1 8CV sing 16 n n C2 H2 8CV sing 17 n n C3 H3 8CV sing 18 n n C4 H4 8CV sing 19 n n C5 H5 8CV sing 20 n n C5 H6 8CV sing 21 n n C6 H7 8CV sing 22 n n C7 H8 8CV sing 23 n n N1 H9 8CV sing 24 n n C8 H10 8CV sing 25 n n N2 H11 8CV sing 26 n n N3 H12 8CV sing 27 n n N4 H13 8CV sing 28 n n N5 H14 8CV sing 29 n n N5 H15 8CV sing 30 n n # _atom_sites.entry_id 5UIH _atom_sites.fract_transf_matrix[1][1] 0.025903 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008142 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016986 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8CV A 1 201 201 8CV 8CV . C 3 NA A 1 202 202 NA NA . D 4 NAP A 1 203 203 NAP NAP . E 5 BME A 1 204 204 BME BME . F 6 EDO A 1 205 205 EDO EDO . G 7 HOH A 1 301 301 HOH HOH . G 7 HOH A 2 302 302 HOH HOH . G 7 HOH A 3 303 303 HOH HOH . G 7 HOH A 4 304 304 HOH HOH . G 7 HOH A 5 305 305 HOH HOH . G 7 HOH A 6 306 306 HOH HOH . G 7 HOH A 7 307 307 HOH HOH . G 7 HOH A 8 308 308 HOH HOH . G 7 HOH A 9 309 309 HOH HOH . G 7 HOH A 10 310 310 HOH HOH . G 7 HOH A 11 311 311 HOH HOH . G 7 HOH A 12 312 312 HOH HOH . G 7 HOH A 13 313 313 HOH HOH . G 7 HOH A 14 314 314 HOH HOH . G 7 HOH A 15 315 315 HOH HOH . G 7 HOH A 16 316 316 HOH HOH . G 7 HOH A 17 317 317 HOH HOH . G 7 HOH A 18 318 318 HOH HOH . G 7 HOH A 19 319 319 HOH HOH . G 7 HOH A 20 320 320 HOH HOH . G 7 HOH A 21 321 321 HOH HOH . G 7 HOH A 22 322 322 HOH HOH . G 7 HOH A 23 323 323 HOH HOH . G 7 HOH A 24 324 324 HOH HOH . G 7 HOH A 25 325 325 HOH HOH . G 7 HOH A 26 326 326 HOH HOH . G 7 HOH A 27 327 327 HOH HOH . G 7 HOH A 28 328 328 HOH HOH . G 7 HOH A 29 329 329 HOH HOH . G 7 HOH A 30 330 330 HOH HOH . G 7 HOH A 31 331 331 HOH HOH . G 7 HOH A 32 332 332 HOH HOH . G 7 HOH A 33 333 333 HOH HOH . G 7 HOH A 34 334 334 HOH HOH . G 7 HOH A 35 335 335 HOH HOH . G 7 HOH A 36 336 336 HOH HOH . G 7 HOH A 37 337 337 HOH HOH . G 7 HOH A 38 338 338 HOH HOH . G 7 HOH A 39 339 339 HOH HOH . G 7 HOH A 40 340 340 HOH HOH . G 7 HOH A 41 341 341 HOH HOH . G 7 HOH A 42 342 342 HOH HOH . G 7 HOH A 43 343 343 HOH HOH . G 7 HOH A 44 344 344 HOH HOH . G 7 HOH A 45 345 345 HOH HOH . G 7 HOH A 46 346 346 HOH HOH . G 7 HOH A 47 347 347 HOH HOH . G 7 HOH A 48 348 348 HOH HOH . G 7 HOH A 49 349 349 HOH HOH . G 7 HOH A 50 350 350 HOH HOH . G 7 HOH A 51 351 351 HOH HOH . G 7 HOH A 52 352 352 HOH HOH . G 7 HOH A 53 353 353 HOH HOH . G 7 HOH A 54 354 354 HOH HOH . G 7 HOH A 55 355 355 HOH HOH . G 7 HOH A 56 356 356 HOH HOH . G 7 HOH A 57 357 357 HOH HOH . G 7 HOH A 58 358 358 HOH HOH . G 7 HOH A 59 359 359 HOH HOH . G 7 HOH A 60 360 360 HOH HOH . G 7 HOH A 61 361 361 HOH HOH . G 7 HOH A 62 362 362 HOH HOH . G 7 HOH A 63 363 363 HOH HOH . G 7 HOH A 64 364 364 HOH HOH . G 7 HOH A 65 365 365 HOH HOH . G 7 HOH A 66 366 366 HOH HOH . G 7 HOH A 67 367 367 HOH HOH . G 7 HOH A 68 368 368 HOH HOH . G 7 HOH A 69 369 369 HOH HOH . G 7 HOH A 70 370 370 HOH HOH . G 7 HOH A 71 371 371 HOH HOH . G 7 HOH A 72 372 372 HOH HOH . G 7 HOH A 73 373 373 HOH HOH . G 7 HOH A 74 374 374 HOH HOH . G 7 HOH A 75 375 375 HOH HOH . G 7 HOH A 76 376 376 HOH HOH . G 7 HOH A 77 377 377 HOH HOH . G 7 HOH A 78 378 378 HOH HOH . G 7 HOH A 79 379 379 HOH HOH . G 7 HOH A 80 380 380 HOH HOH . G 7 HOH A 81 381 381 HOH HOH . G 7 HOH A 82 382 382 HOH HOH . G 7 HOH A 83 383 383 HOH HOH . G 7 HOH A 84 384 384 HOH HOH . G 7 HOH A 85 385 385 HOH HOH . G 7 HOH A 86 386 386 HOH HOH . G 7 HOH A 87 387 387 HOH HOH . G 7 HOH A 88 388 388 HOH HOH . G 7 HOH A 89 389 389 HOH HOH . G 7 HOH A 90 390 390 HOH HOH . G 7 HOH A 91 391 391 HOH HOH . G 7 HOH A 92 392 392 HOH HOH . G 7 HOH A 93 393 393 HOH HOH . G 7 HOH A 94 394 394 HOH HOH . G 7 HOH A 95 395 395 HOH HOH . G 7 HOH A 96 396 396 HOH HOH . G 7 HOH A 97 397 397 HOH HOH . G 7 HOH A 98 398 398 HOH HOH . G 7 HOH A 99 399 399 HOH HOH . G 7 HOH A 100 400 400 HOH HOH . G 7 HOH A 101 401 401 HOH HOH . G 7 HOH A 102 402 402 HOH HOH . G 7 HOH A 103 403 403 HOH HOH . G 7 HOH A 104 404 404 HOH HOH . G 7 HOH A 105 405 405 HOH HOH . G 7 HOH A 106 406 406 HOH HOH . G 7 HOH A 107 407 407 HOH HOH . G 7 HOH A 108 408 408 HOH HOH . G 7 HOH A 109 409 409 HOH HOH . G 7 HOH A 110 410 410 HOH HOH . G 7 HOH A 111 411 411 HOH HOH . G 7 HOH A 112 412 412 HOH HOH . G 7 HOH A 113 413 413 HOH HOH . G 7 HOH A 114 414 414 HOH HOH . G 7 HOH A 115 415 415 HOH HOH . G 7 HOH A 116 416 416 HOH HOH . G 7 HOH A 117 417 417 HOH HOH . G 7 HOH A 118 418 418 HOH HOH . G 7 HOH A 119 419 419 HOH HOH . G 7 HOH A 120 420 420 HOH HOH . G 7 HOH A 121 421 421 HOH HOH . G 7 HOH A 122 422 422 HOH HOH . G 7 HOH A 123 423 423 HOH HOH . G 7 HOH A 124 424 424 HOH HOH . G 7 HOH A 125 425 425 HOH HOH . G 7 HOH A 126 426 426 HOH HOH . G 7 HOH A 127 427 427 HOH HOH . G 7 HOH A 128 428 428 HOH HOH . G 7 HOH A 129 429 429 HOH HOH . G 7 HOH A 130 430 430 HOH HOH . G 7 HOH A 131 431 431 HOH HOH . G 7 HOH A 132 432 432 HOH HOH . G 7 HOH A 133 433 433 HOH HOH . G 7 HOH A 134 434 434 HOH HOH . G 7 HOH A 135 435 435 HOH HOH . G 7 HOH A 136 436 436 HOH HOH . G 7 HOH A 137 437 437 HOH HOH . G 7 HOH A 138 438 438 HOH HOH . G 7 HOH A 139 439 439 HOH HOH . G 7 HOH A 140 440 440 HOH HOH . G 7 HOH A 141 441 441 HOH HOH . G 7 HOH A 142 442 442 HOH HOH . G 7 HOH A 143 443 443 HOH HOH . G 7 HOH A 144 444 444 HOH HOH . G 7 HOH A 145 445 445 HOH HOH . G 7 HOH A 146 446 446 HOH HOH . G 7 HOH A 147 447 447 HOH HOH . G 7 HOH A 148 448 448 HOH HOH . G 7 HOH A 149 449 449 HOH HOH . G 7 HOH A 150 450 450 HOH HOH . G 7 HOH A 151 451 451 HOH HOH . G 7 HOH A 152 452 452 HOH HOH . G 7 HOH A 153 453 453 HOH HOH . G 7 HOH A 154 454 454 HOH HOH . G 7 HOH A 155 455 455 HOH HOH . G 7 HOH A 156 456 456 HOH HOH . G 7 HOH A 157 457 457 HOH HOH . G 7 HOH A 158 458 458 HOH HOH . G 7 HOH A 159 459 459 HOH HOH . G 7 HOH A 160 460 460 HOH HOH . G 7 HOH A 161 461 461 HOH HOH . G 7 HOH A 162 462 462 HOH HOH . G 7 HOH A 163 463 463 HOH HOH . G 7 HOH A 164 464 464 HOH HOH . G 7 HOH A 165 465 465 HOH HOH . G 7 HOH A 166 466 466 HOH HOH . G 7 HOH A 167 467 467 HOH HOH . G 7 HOH A 168 468 468 HOH HOH . G 7 HOH A 169 469 469 HOH HOH . G 7 HOH A 170 470 470 HOH HOH . G 7 HOH A 171 471 471 HOH HOH . G 7 HOH A 172 472 472 HOH HOH . G 7 HOH A 173 473 473 HOH HOH . G 7 HOH A 174 474 474 HOH HOH . G 7 HOH A 175 475 475 HOH HOH . G 7 HOH A 176 476 476 HOH HOH . G 7 HOH A 177 477 477 HOH HOH . G 7 HOH A 178 478 478 HOH HOH . G 7 HOH A 179 479 479 HOH HOH . G 7 HOH A 180 480 480 HOH HOH . G 7 HOH A 181 481 481 HOH HOH . G 7 HOH A 182 482 482 HOH HOH . G 7 HOH A 183 483 483 HOH HOH . G 7 HOH A 184 484 484 HOH HOH . G 7 HOH A 185 485 485 HOH HOH . G 7 HOH A 186 486 486 HOH HOH . G 7 HOH A 187 487 487 HOH HOH . G 7 HOH A 188 488 488 HOH HOH . G 7 HOH A 189 489 489 HOH HOH . G 7 HOH A 190 490 490 HOH HOH . G 7 HOH A 191 491 491 HOH HOH . G 7 HOH A 192 492 492 HOH HOH . G 7 HOH A 193 493 493 HOH HOH . G 7 HOH A 194 494 494 HOH HOH . G 7 HOH A 195 495 495 HOH HOH . G 7 HOH A 196 496 496 HOH HOH . G 7 HOH A 197 497 497 HOH HOH . G 7 HOH A 198 498 498 HOH HOH . G 7 HOH A 199 499 499 HOH HOH . G 7 HOH A 200 500 500 HOH HOH . G 7 HOH A 201 501 501 HOH HOH . G 7 HOH A 202 502 502 HOH HOH . G 7 HOH A 203 503 503 HOH HOH . G 7 HOH A 204 504 504 HOH HOH . G 7 HOH A 205 505 505 HOH HOH . G 7 HOH A 206 506 506 HOH HOH . G 7 HOH A 207 507 507 HOH HOH . G 7 HOH A 208 508 508 HOH HOH . G 7 HOH A 209 509 509 HOH HOH . G 7 HOH A 210 510 510 HOH HOH . G 7 HOH A 211 511 511 HOH HOH . G 7 HOH A 212 512 512 HOH HOH . G 7 HOH A 213 513 513 HOH HOH . G 7 HOH A 214 514 514 HOH HOH . G 7 HOH A 215 515 515 HOH HOH . G 7 HOH A 216 516 516 HOH HOH . G 7 HOH A 217 517 517 HOH HOH . G 7 HOH A 218 518 518 HOH HOH . G 7 HOH A 219 519 519 HOH HOH . G 7 HOH A 220 520 520 HOH HOH . G 7 HOH A 221 521 521 HOH HOH . G 7 HOH A 222 522 522 HOH HOH . G 7 HOH A 223 523 523 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8CV . . . B 2 0.048 6.8 -26.5 1 28.87 ? C1 8CV 201 A 1 HETATM 2 C C2 8CV . . . B 2 1.235 7.682 -26.17 1 28.24 ? C2 8CV 201 A 1 HETATM 3 C C3 8CV . . . B 2 -1.015 7.286 -27.25 1 39.83 ? C3 8CV 201 A 1 HETATM 4 C C4 8CV . . . B 2 -0.004 5.485 -26.04 1 34.28 ? C4 8CV 201 A 1 HETATM 5 C C5 8CV . . . B 2 0.905 8.531 -24.945 1 31.9 ? C5 8CV 201 A 1 HETATM 6 C C6 8CV . . . B 2 -2.103 6.471 -27.538 1 36.6 ? C6 8CV 201 A 1 HETATM 7 C C7 8CV . . . B 2 -1.089 4.67 -26.331 1 35.72 ? C7 8CV 201 A 1 HETATM 8 N N1 8CV . . . B 2 2.049 9.308 -24.424 1 20.45 ? N1 8CV 201 A 1 HETATM 9 C C8 8CV . . . B 2 -2.143 5.163 -27.083 1 45.28 ? C8 8CV 201 A 1 HETATM 10 C C9 8CV . . . B 2 2.337 9.583 -23.15 1 15.24 ? C9 8CV 201 A 1 HETATM 11 N N2 8CV . . . B 2 1.534 9.428 -22.102 1 15.92 ? N2 8CV 201 A 1 HETATM 12 N N3 8CV . . . B 2 3.576 10.034 -22.891 1 16.87 ? N3 8CV 201 A 1 HETATM 13 C C10 8CV . . . B 2 0.231 9.604 -22.036 1 18.32 ? C10 8CV 201 A 1 HETATM 14 N N4 8CV . . . B 2 -0.489 10.318 -22.911 1 22.06 ? N4 8CV 201 A 1 HETATM 15 N N5 8CV . . . B 2 -0.431 9.032 -21.029 1 15.81 ? N5 8CV 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #